Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 9.7e-248 859.8 452 100.0
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.9e-182 642.9 461 76.6
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 6.4e-175 617.8 438 76.0
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 2.7e-173 612.5 439 75.9
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 7.4e-155 551.2 443 68.4
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 3.2e-150 535.8 441 67.6
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 6.7e-148 528.1 492 61.6
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 1.5e-147 526.9 422 68.0
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.1e-146 523.1 472 63.3
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 6.9e-145 518.1 443 64.1
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 5.8e-144 515.0 424 67.7
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 2.5e-139 499.6 460 62.0
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 9.4e-134 481.1 443 63.7
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-84 317.8 373 49.6
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 8.9e-84 315.1 384 49.7
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 1.5e-83 314.3 375 52.5
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 4.4e-83 312.8 450 45.8
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 5.8e-83 312.4 373 51.5
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 7.5e-83 312.0 376 49.2
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 4.9e-82 309.3 382 50.5
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 1.9e-81 307.4 378 49.5
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 1.9e-81 307.4 379 50.1
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 4.1e-81 306.2 345 51.9
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 4.1e-81 306.2 371 43.7
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 1.6e-80 304.3 380 48.2
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 6.0e-80 302.4 451 43.7
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-79 300.8 464 44.4
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 2.3e-79 300.4 413 47.2
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 6.6e-79 298.9 359 49.3
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.1e-78 298.1 387 48.3
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 2.5e-78 297.0 339 52.2
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 7.3e-78 295.4 455 44.0
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 2.8e-77 293.5 364 49.5
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 3.1e-76 290.0 335 54.6
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 6.8e-76 288.9 355 47.0
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 4.4e-75 286.2 323 52.3
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 5.8e-75 285.8 321 53.3
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 5.8e-75 285.8 339 52.5
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 7.5e-75 285.4 250 54.4
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 9.8e-75 285.0 339 52.2
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.7e-74 284.3 421 39.7
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 3.7e-74 283.1 335 52.2
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 6.4e-74 282.3 336 50.6
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 8.3e-74 282.0 325 52.9
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.4e-73 281.2 329 52.3
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.4e-73 281.2 329 52.3
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 2.4e-73 280.4 324 51.5
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 2.4e-73 280.4 337 49.0
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 2.4e-73 280.4 328 51.2
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.4e-73 280.4 329 52.3
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 3.2e-73 280.0 330 51.5
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 4.1e-73 279.6 320 51.2
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 5.4e-73 279.3 333 51.7
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 7.0e-73 278.9 337 49.9
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 7.0e-73 278.9 341 50.7
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 9.2e-73 278.5 325 50.8
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.2e-72 278.1 319 51.4
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.2e-72 278.1 331 52.3
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.2e-72 278.1 329 52.3
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 2.1e-72 277.3 334 51.8
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 2.7e-72 276.9 318 50.9
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.5e-72 276.6 333 51.4
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 6.0e-72 275.8 356 42.7
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 6.0e-72 275.8 335 51.6
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 6.0e-72 275.8 340 50.3
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.0e-72 275.8 342 49.1
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 7.8e-72 275.4 311 49.5
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 1.3e-71 274.6 318 51.6
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 1.3e-71 274.6 337 43.9
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.7e-71 274.2 317 48.9
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 1.7e-71 274.2 338 49.7
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 2.3e-71 273.9 310 51.9
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 2.3e-71 273.9 334 50.3
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 3.0e-71 273.5 328 51.5
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 3.0e-71 273.5 325 51.7
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 3.0e-71 273.5 335 50.4
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 3.9e-71 273.1 340 49.7
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 5.1e-71 272.7 315 51.4
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 8.6e-71 271.9 317 52.7
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 8.6e-71 271.9 334 50.6
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 8.6e-71 271.9 358 47.8
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.1e-70 271.6 327 50.5
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.5e-70 271.2 323 51.7
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.5e-70 270.4 330 51.8
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 2.5e-70 270.4 319 45.5
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 4.3e-70 269.6 324 49.4
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 5.6e-70 269.2 329 49.5
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 5.6e-70 269.2 335 49.6
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 5.6e-70 269.2 335 50.1
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 7.3e-70 268.9 331 49.8
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 7.3e-70 268.9 329 52.6
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 9.5e-70 268.5 339 49.3
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 9.5e-70 268.5 327 49.8
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 1.6e-69 267.7 320 45.3
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 2.8e-69 266.9 324 46.9
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 2.8e-69 266.9 315 48.9
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 3.6e-69 266.5 327 48.9
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.6e-69 266.5 336 48.8
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 3.6e-69 266.5 336 48.8
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.6e-69 266.5 328 48.2
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 6.2e-69 265.8 337 47.8
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 8.1e-69 265.4 243 52.3
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.3e-68 263.8 325 48.6
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 2.3e-68 263.8 341 47.2
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 6.8e-68 262.3 337 49.9
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 1.2e-67 261.5 341 49.6
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 1.5e-67 261.2 192 61.5
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.5e-67 261.2 206 58.3
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.5e-67 261.2 320 43.4
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 2.0e-67 260.8 328 48.8
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 2.0e-67 260.8 316 43.4
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 3.4e-67 260.0 197 58.9
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 5.8e-67 259.2 335 50.7
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 7.5e-67 258.8 333 48.3
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 9.9e-67 258.5 315 46.0
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.3e-66 258.1 207 58.5
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 1.7e-66 257.7 315 49.5
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 2.2e-66 257.3 316 49.1
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.9e-66 256.9 325 47.4
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.9e-66 256.9 324 48.5
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 3.7e-66 256.5 189 60.8
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.7e-66 256.5 347 46.1
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 4.9e-66 256.1 311 49.2
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 4.9e-66 256.1 311 49.2
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 6.4e-66 255.8 227 54.2
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 8.3e-66 255.4 223 53.8
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 3.2e-65 253.4 313 43.8
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 5.4e-65 252.7 323 46.1
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 5.4e-65 252.7 335 46.6
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 1.6e-64 251.1 336 46.1
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.7e-64 250.4 390 41.5
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 4.6e-64 249.6 323 48.3
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.6e-64 249.6 345 47.2
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.0e-63 248.4 314 47.5
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 2.5e-62 243.8 335 45.4
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 3.3e-62 243.4 322 48.1
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 3.3e-62 243.4 311 48.9
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 1.2e-59 235.0 316 46.8
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.5e-59 234.6 332 38.3
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 9.2e-57 225.3 304 49.0
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 9.2e-57 225.3 304 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 3.0e-55 220.3 328 43.0
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 2.5e-54 217.2 172 54.7
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 9.6e-54 215.3 155 60.6
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 1.3e-53 214.9 313 45.7
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.8e-53 213.8 274 44.5
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 2.8e-53 213.8 330 45.2
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 8.1e-53 212.2 314 37.3
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 8.1e-53 212.2 425 39.5
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.1e-52 210.3 297 44.1
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 9.9e-51 205.3 287 48.1
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.4e-49 200.7 145 62.1
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 5.4e-49 199.5 180 48.9
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 2.7e-40 170.6 180 43.9
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.3e-39 168.3 136 55.1
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.8e-39 167.9 277 43.7
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 9.6e-38 162.2 124 59.7
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.2e-37 159.5 138 54.3
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.1e-36 158.7 275 34.2
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.9e-36 156.0 320 35.0
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 7.6e-35 152.5 333 36.0
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.2e-33 147.1 99 68.7
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 4.9e-26 123.2 69 73.9
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 2.3e-23 114.4 70 67.1
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 5.7e-22 109.8 133 39.1
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 5.9e-11 73.2 38 76.3
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 2.2e-10 71.2 37 75.7


User provided reference genes

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