Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.5e-116 422.2 223 100.0
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.3e-99 366.7 230 86.5
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 5.3e-90 334.7 194 89.2
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 3.6e-86 322.0 194 86.6
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 2.6e-76 289.3 215 74.0
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 3.1e-74 282.3 271 60.9
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.2e-73 280.4 224 71.0
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 6.6e-72 274.6 232 68.5
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 2.5e-71 272.7 232 67.2
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 4.3e-71 271.9 232 67.7
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.2e-70 270.4 232 66.4
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.2e-70 270.4 225 68.4
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.8e-70 269.2 232 66.4
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.8e-70 269.2 223 67.3
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 6.1e-70 268.1 223 66.8
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 3.0e-69 265.8 226 67.7
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 4.0e-69 265.4 232 67.2
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 8.9e-69 264.2 204 72.5
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 2.0e-68 263.1 205 70.7
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 5.7e-68 261.5 226 64.6
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.3e-67 260.4 209 68.9
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 3.7e-67 258.8 220 66.4
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.7e-67 258.8 224 66.5
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 8.3e-67 257.7 231 64.5
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 2.4e-66 256.1 244 61.9
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 5.4e-66 255.0 225 64.9
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 5.4e-66 255.0 219 65.8
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 2.7e-65 252.7 227 65.2
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.5e-65 252.3 219 64.8
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 5.9e-65 251.5 224 64.3
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 5.9e-65 251.5 224 66.1
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.0e-64 250.8 225 66.2
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.3e-64 250.4 227 63.9
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 3.0e-64 249.2 216 63.9
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 3.0e-64 249.2 219 64.4
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 3.0e-64 249.2 219 64.8
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 3.0e-64 249.2 203 70.4
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 5.0e-64 248.4 223 65.5
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 6.6e-64 248.1 218 67.0
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 8.6e-64 247.7 225 65.3
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 2.5e-63 246.1 226 65.0
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 2.5e-63 246.1 234 62.8
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.3e-63 245.7 211 64.5
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 4.3e-63 245.4 222 65.3
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 5.6e-63 245.0 225 63.1
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 5.6e-63 245.0 192 66.7
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 7.3e-63 244.6 234 62.4
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.2e-62 243.8 213 63.8
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.6e-62 243.4 219 63.5
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.1e-62 243.0 209 68.4
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 2.1e-62 243.0 206 66.5
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 2.8e-62 242.7 186 67.7
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 3.6e-62 242.3 171 73.1
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 3.6e-62 242.3 212 64.2
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 4.7e-62 241.9 208 65.4
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 6.2e-62 241.5 166 73.5
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 6.2e-62 241.5 194 66.0
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 6.2e-62 241.5 194 66.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 6.2e-62 241.5 194 66.0
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.0e-61 240.7 166 72.9
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 1.0e-61 240.7 228 61.4
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.8e-61 240.0 224 60.7
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 3.1e-61 239.2 218 61.0
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 3.1e-61 239.2 220 60.5
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 4.0e-61 238.8 205 64.9
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.5e-60 236.9 221 63.8
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 2.6e-60 236.1 186 68.8
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 2.6e-60 236.1 219 60.3
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 3.4e-60 235.7 224 58.9
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 3.4e-60 235.7 224 58.9
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 3.4e-60 235.7 227 58.6
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 4.4e-60 235.3 218 59.6
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 4.4e-60 235.3 224 58.9
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 4.4e-60 235.3 212 65.6
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 7.5e-60 234.6 227 58.1
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.7e-59 233.4 229 59.8
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 3.7e-59 232.3 222 59.9
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.4e-58 230.3 203 66.0
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 7.0e-58 228.0 216 63.0
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.2e-58 227.6 224 61.6
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.2e-57 227.3 224 61.6
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 3.5e-57 225.7 192 65.6
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 6.0e-57 224.9 217 59.9
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 6.0e-57 224.9 192 67.7
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 6.0e-57 224.9 209 62.2
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 6.0e-57 224.9 226 61.5
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.0e-56 224.2 226 60.6
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 3.9e-56 222.2 235 55.7
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 5.0e-56 221.9 240 55.8
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 8.6e-56 221.1 221 58.4
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 1.1e-55 220.7 209 61.2
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 2.5e-55 219.5 227 56.4
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.2e-54 217.2 228 55.3
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.2e-54 217.2 226 57.5
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 1.2e-54 217.2 234 56.8
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.8e-54 216.1 225 59.6
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 8.1e-54 214.5 205 59.0
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 1.1e-53 214.2 212 60.4
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 5.8e-52 208.4 233 56.7
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 8.3e-51 204.5 207 58.0
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.1e-50 204.1 139 74.1
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.4e-50 203.8 178 65.2
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 5.1e-48 195.3 148 71.6
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 8.6e-48 194.5 132 79.5
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 8.6e-48 194.5 169 65.1
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.1e-47 194.1 122 86.1
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 2.5e-47 193.0 174 60.9
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 7.3e-47 191.4 231 52.4
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 1.6e-46 190.3 130 73.1
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 2.3e-45 186.4 126 75.4
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.2e-44 184.1 217 56.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 6.4e-43 178.3 150 67.3
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 1.4e-42 177.2 226 49.1
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.9e-42 176.8 156 58.3
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 2.4e-42 176.4 181 54.7
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 5.1e-40 168.7 194 53.6
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 5.6e-39 165.2 182 51.1
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 9.6e-39 164.5 133 67.7
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.6e-38 162.5 186 53.2
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 5.2e-37 158.7 109 75.2
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 7.6e-28 128.3 109 64.2
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 2.9e-27 126.3 105 61.0
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.2e-26 122.9 165 50.3
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.1e-25 120.2 162 50.6
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 5.3e-21 105.5 214 37.4
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.2e-20 104.4 101 62.4
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 2.4e-18 96.7 226 35.4
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 2.8e-14 83.2 84 59.5
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 4.8e-14 82.4 155 39.4
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 5.1e-08 62.4 52 76.9
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 1.1e-07 61.2 116 47.4
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.5e-07 60.1 68 50.0


User provided reference genes

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