Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 2.0e-178 629.0 325 100.0
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 1.9e-157 559.3 324 88.9
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 1.7e-113 413.3 334 70.7
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.5e-109 400.2 344 69.2
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 8.9e-70 268.1 368 51.6
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 4.8e-55 219.2 444 41.7
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 8.1e-55 218.4 390 44.1
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 3.1e-54 216.5 445 40.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.0e-49 201.4 447 37.8
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.3e-49 200.3 421 39.4
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 5.1e-49 199.1 367 43.9
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 6.7e-49 198.7 403 41.7
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.5e-48 196.8 451 37.3
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 7.4e-48 195.3 441 36.7
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.1e-46 191.4 425 38.8
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 1.8e-46 190.7 440 37.0
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.3e-46 189.1 423 39.0
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.3e-46 189.1 423 39.0
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.6e-45 186.8 456 37.1
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 4.5e-45 186.0 441 36.3
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 4.5e-45 186.0 443 37.5
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 4.5e-45 186.0 443 37.5
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 7.6e-45 185.3 445 37.3
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.3e-44 184.5 430 38.6
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.7e-44 184.1 438 36.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 4.9e-44 182.6 434 38.5
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 8.4e-44 181.8 450 35.6
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 1.4e-43 181.0 443 36.3
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 9.3e-43 178.3 459 34.9
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.7e-42 176.8 448 37.9
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.3e-41 174.5 460 33.9
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.0e-41 173.3 450 37.6
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 3.0e-41 173.3 461 34.3
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.0e-41 173.3 455 35.6
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 3.9e-41 172.9 473 35.1
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 3.9e-41 172.9 468 33.3
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 6.7e-41 172.2 458 33.2
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.7e-41 172.2 466 33.0
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.1e-40 171.4 409 36.9
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 2.5e-40 170.2 456 36.8
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.3e-40 169.9 348 42.5
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 3.3e-40 169.9 453 38.0
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 4.3e-40 169.5 460 34.3
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.7e-40 169.1 449 35.4
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 5.7e-40 169.1 452 35.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 7.4e-40 168.7 461 34.1
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 9.6e-40 168.3 455 35.4
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.1e-39 167.2 451 34.1
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 3.7e-39 166.4 403 38.5
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 3.7e-39 166.4 452 35.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 6.3e-39 165.6 411 36.5
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 1.1e-38 164.9 463 34.1
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.1e-38 164.9 473 33.6
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 3.1e-38 163.3 458 32.3
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 4.1e-38 162.9 407 37.8
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 5.3e-38 162.5 427 37.2
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 9.0e-38 161.8 448 34.4
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.2e-37 161.4 411 37.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 1.5e-37 161.0 459 35.7
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 2.6e-37 160.2 465 32.3
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 2.6e-37 160.2 411 37.7
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 3.4e-37 159.8 406 36.7
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 4.5e-37 159.5 403 35.7
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.5e-37 159.5 483 32.3
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 5.9e-37 159.1 459 35.5
VMungo0464G0074 Vigna mungo HOM05D010769 ORTHO05D011972 2.9e-36 156.8 102 80.4
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 3.8e-36 156.4 396 36.6
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.1e-35 154.8 456 33.8
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.4e-35 154.5 418 36.1
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.5e-35 153.7 461 31.9
VMungo0251G1971 Vigna mungo HOM05D010769 ORTHO05D011972 3.2e-35 153.3 103 78.6
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 7.2e-35 152.1 403 35.0
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 7.2e-35 152.1 403 35.0
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 7.2e-35 152.1 425 35.3
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 7.2e-35 152.1 448 33.9
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.6e-34 151.0 405 34.8
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 1.6e-34 151.0 406 36.7
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.6e-34 151.0 430 34.2
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 6.1e-34 149.1 420 36.0
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 7.9e-34 148.7 467 32.8
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.8e-33 147.5 469 31.3
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 1.8e-33 147.5 451 31.5
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.3e-33 147.1 451 33.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.3e-33 147.1 425 34.4
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 3.9e-33 146.4 460 33.7
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 5.1e-33 146.0 452 35.0
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 6.7e-33 145.6 435 33.1
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 8.7e-33 145.2 494 31.6
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 2.8e-31 140.2 396 32.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 2.8e-31 140.2 378 34.7
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 6.3e-31 139.0 456 31.6
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.4e-30 137.9 431 32.9
VMungo0770G0001 Vigna mungo HOM05D010769 ORTHO05D011972 9.1e-30 135.2 85 82.4
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 3.4e-29 133.3 450 32.7
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.3e-28 131.3 317 36.3
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 2.2e-28 130.6 441 33.3
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 8.5e-28 128.6 450 32.7
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 3.2e-27 126.7 447 32.9
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.6e-26 124.4 413 30.8
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 2.1e-26 124.0 452 29.9
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 7.7e-21 105.5 334 32.6
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 3.8e-20 103.2 302 33.4
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-19 101.7 415 30.1
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.4e-19 101.3 445 28.3
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.2e-18 98.2 444 28.2
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.1e-18 97.4 492 27.6
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 2.3e-17 94.0 475 27.2
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.3e-15 88.2 137 43.1
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-15 87.8 476 26.3
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 6.3e-15 85.9 312 31.1
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.8e-14 84.3 497 27.0
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.1e-14 83.6 352 29.8
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 4.2e-11 73.2 475 25.3
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.4e-09 68.2 65 53.8
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.5e-08 64.7 131 32.1
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 7.5e-08 62.4 164 37.8
Zm00001eb273600 Zea mays HOM05D032587 ORTHO05D037111 5.3e-06 56.2 100 40.0


User provided reference genes

Program Settings