Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 2.9e-120 435.3 222 100.0
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 5.0e-96 354.8 217 86.2
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 7.9e-94 347.4 297 66.7
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 9.7e-76 287.3 222 71.2
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 5.3e-74 281.6 222 71.2
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 7.7e-73 277.7 226 68.6
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 3.4e-68 262.3 219 68.0
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 5.7e-68 261.5 225 66.2
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 4.0e-61 238.8 229 62.4
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 1.4e-58 230.3 176 69.9
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 7.0e-58 228.0 159 74.8
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.9e-57 224.9 184 66.3
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 3.8e-56 222.2 182 69.2
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.8e-56 222.2 145 78.6
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 8.6e-56 221.1 168 70.2
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.5e-55 220.3 145 77.9
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 1.9e-55 219.9 168 72.0
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 2.5e-55 219.5 153 74.5
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 4.3e-55 218.8 168 70.8
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 5.6e-55 218.4 168 71.4
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 7.3e-55 218.0 186 64.0
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.3e-55 218.0 145 77.2
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 2.1e-54 216.5 137 78.8
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 3.0e-53 212.6 200 60.0
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 5.2e-53 211.8 170 65.9
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 5.2e-53 211.8 201 60.2
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.2e-52 210.7 168 68.5
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 4.4e-52 208.8 167 70.1
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.4e-52 208.8 167 70.1
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 5.7e-52 208.4 166 66.9
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 7.5e-52 208.0 167 64.7
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 9.8e-52 207.6 167 64.7
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 9.8e-52 207.6 167 65.3
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.2e-51 206.5 167 69.5
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 2.9e-51 206.1 220 56.8
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 2.9e-51 206.1 184 61.4
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.1e-50 204.1 175 66.9
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.4e-50 203.8 182 63.2
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.2e-50 202.6 143 71.3
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 5.4e-50 201.8 143 71.3
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 1.2e-49 200.7 166 65.7
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.2e-49 200.7 124 81.5
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 2.0e-49 199.9 169 61.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.0e-49 199.9 160 65.6
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 2.0e-49 199.9 133 72.2
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.7e-49 199.5 143 72.0
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 4.6e-49 198.7 183 62.3
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 1.0e-48 197.6 184 60.3
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 3.0e-48 196.1 126 77.8
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 5.0e-48 195.3 162 64.2
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 5.0e-48 195.3 162 66.0
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 5.0e-48 195.3 176 61.9
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 6.6e-48 194.9 157 65.6
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.1e-47 194.1 159 65.4
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.1e-47 194.1 134 72.4
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.1e-47 194.1 148 66.2
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.5e-47 193.7 160 64.4
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 1.5e-47 193.7 160 65.0
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.5e-47 193.7 145 71.0
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 7.3e-47 191.4 186 59.1
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.2e-46 190.7 181 59.1
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.2e-46 190.7 173 60.7
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 3.6e-46 189.1 186 55.9
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 1.0e-45 187.6 164 63.4
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.4e-45 187.2 120 81.7
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.2e-45 185.3 151 65.6
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 5.2e-45 185.3 163 60.1
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.0e-44 183.3 203 54.2
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 2.0e-44 183.3 173 58.4
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 3.7e-43 179.1 127 74.0
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 4.9e-43 178.7 149 65.8
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.4e-42 177.2 162 61.7
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 1.4e-42 177.2 117 76.9
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.9e-42 176.8 143 71.3
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.0e-41 173.3 190 55.3
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 6.0e-41 171.8 121 75.2
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 2.3e-40 169.9 161 57.8
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 6.6e-40 168.3 180 55.0
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 3.3e-39 166.0 128 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 2.8e-38 162.9 143 60.1
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 2.6e-36 156.4 121 66.1
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 9.2e-34 147.9 189 49.2
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 1.2e-33 147.5 92 81.5
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.6e-33 147.1 92 78.3
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 1.3e-32 144.1 120 61.7
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 8.6e-32 141.4 121 59.5
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.1e-31 141.0 122 64.8
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.5e-31 140.6 169 55.0
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 2.5e-31 139.8 114 67.5
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.6e-30 137.1 83 83.1
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.6e-30 136.0 145 55.9
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.4e-29 134.0 101 73.3
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.3e-29 133.3 94 73.4
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 4.0e-29 132.5 124 59.7
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 4.4e-28 129.0 160 51.9
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 2.4e-26 123.2 71 83.1
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 7.1e-26 121.7 83 77.1
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.8e-22 109.8 80 71.2
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.5e-20 104.0 169 45.6
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 1.5e-20 104.0 92 60.9
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 1.4e-18 97.4 49 95.9
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 1.7e-16 90.5 124 46.0
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 3.9e-16 89.4 115 47.0
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 2.5e-15 86.7 70 67.1
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 8.4e-11 71.6 134 38.8
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 7.1e-10 68.6 88 50.0
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 9.3e-10 68.2 126 34.1
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 1.0e-08 64.7 118 32.2
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 3.0e-08 63.2 185 30.3
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 3.3e-07 59.7 161 31.1
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 4.3e-07 59.3 166 30.7
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 4.3e-07 59.3 157 30.6
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 9.6e-07 58.2 151 30.5
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 1.3e-06 57.8 126 31.0
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 2.1e-06 57.0 179 30.7
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 2.1e-06 57.0 167 28.7
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 2.1e-06 57.0 120 30.8
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 2.8e-06 56.6 184 28.8
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 6.2e-06 55.5 164 31.7


User provided reference genes

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