Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 8.2e-205 716.8 368 100.0
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 1.8e-196 689.1 368 95.9
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 9.1e-196 686.8 368 94.8
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 3.6e-192 674.9 368 93.8
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 3.7e-181 638.3 366 88.5
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 3.1e-175 618.6 368 86.1
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 2.7e-171 605.5 364 84.3
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 2.3e-167 592.4 404 77.0
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 1.2e-166 590.1 342 86.0
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 7.8e-163 577.4 377 78.5
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 3.2e-156 555.4 369 76.4
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.4e-151 540.0 403 70.7
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 2.6e-150 535.8 381 73.8
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 3.4e-150 535.4 363 73.0
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 2.2e-149 532.7 359 74.9
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.8e-149 531.9 366 73.2
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.8e-149 531.9 359 74.4
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.4e-149 530.8 366 73.0
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 8.4e-149 530.8 366 73.0
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 1.1e-148 530.4 364 72.8
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 5.4e-148 528.1 413 67.1
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 2.7e-147 525.8 362 74.0
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 1.5e-145 520.0 363 72.2
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 1.5e-145 520.0 362 71.5
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.3e-144 516.9 359 73.8
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.6e-144 516.5 309 85.1
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 3.1e-143 512.3 368 72.3
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 2.0e-142 509.6 359 71.0
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 2.9e-141 505.8 359 70.5
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 4.9e-141 505.0 395 68.9
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 6.4e-141 504.6 357 70.6
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 8.4e-141 504.2 380 68.9
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.1e-140 503.8 342 74.3
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.9e-140 503.1 355 71.8
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.6e-139 500.0 362 72.4
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 4.6e-139 498.4 350 72.9
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 6.0e-139 498.0 362 71.8
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 3.9e-138 495.4 455 59.1
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 6.7e-138 494.6 358 70.7
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 5.6e-137 491.5 411 63.0
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 7.4e-137 491.1 413 62.7
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.3e-136 490.3 364 69.5
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.1e-136 489.6 358 69.3
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 3.7e-136 488.8 410 63.4
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 4.8e-136 488.4 358 68.7
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 8.1e-136 487.6 367 70.0
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 1.1e-135 487.3 362 71.5
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 5.8e-134 481.5 355 69.0
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 5.8e-134 481.5 372 66.4
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 2.2e-133 479.6 388 64.9
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 2.9e-133 479.2 406 64.5
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.9e-133 479.2 360 68.3
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 1.1e-132 477.2 359 68.2
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 1.9e-132 476.5 404 61.6
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 3.2e-132 475.7 404 61.6
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 2.7e-131 472.6 375 65.3
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 2.7e-131 472.6 408 63.0
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 6.0e-131 471.5 414 61.4
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 3.0e-130 469.2 345 69.3
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 3.0e-130 469.2 417 59.2
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 8.7e-130 467.6 387 63.3
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 1.5e-129 466.8 356 66.6
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 2.5e-129 466.1 370 66.2
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.6e-128 463.4 342 69.3
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 4.8e-128 461.8 359 66.0
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 1.8e-127 459.9 326 69.6
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 3.1e-127 459.1 444 56.5
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 5.3e-127 458.4 405 60.7
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 6.9e-127 458.0 423 58.2
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.5e-126 456.8 343 67.6
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 4.5e-126 455.3 404 61.6
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.0e-125 454.1 339 67.3
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.0e-125 454.1 409 60.4
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.3e-125 453.8 406 59.9
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 1.7e-125 453.4 415 58.8
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 3.8e-125 452.2 407 60.0
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 6.5e-125 451.4 414 59.2
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 8.4e-125 451.1 385 61.6
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 1.4e-124 450.3 407 60.0
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 5.5e-124 448.4 397 60.2
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 7.1e-124 448.0 406 60.1
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 2.1e-123 446.4 414 57.5
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 2.7e-123 446.0 403 58.3
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 2.7e-123 446.0 403 58.3
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.3e-122 443.7 371 62.8
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.5e-121 439.5 343 66.2
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 2.8e-120 436.0 360 61.7
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.1e-119 434.1 367 62.4
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.4e-119 433.7 320 66.9
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.1e-119 432.6 363 61.2
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.2e-118 430.6 368 59.8
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 3.4e-118 429.1 364 62.4
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 6.5e-117 424.9 368 62.0
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 8.5e-117 424.5 357 63.6
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 2.5e-116 422.9 403 56.8
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 2.5e-116 422.9 362 62.2
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 7.4e-113 411.4 355 61.4
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.2e-112 409.8 342 64.0
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 2.8e-112 409.5 358 61.5
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.8e-112 409.5 342 64.3
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.7e-112 409.1 342 64.0
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.4e-111 406.4 342 63.7
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.1e-111 406.0 342 63.7
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 3.8e-109 399.1 374 58.8
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 8.2e-104 381.3 367 56.1
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 4.1e-103 379.0 317 59.3
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 7.0e-103 378.3 299 64.5
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 7.0e-103 378.3 299 64.5
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 5.5e-100 368.6 363 53.7
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 5.3e-95 352.1 270 66.3
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 1.1e-92 344.4 409 47.7
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 3.5e-86 322.8 214 75.7
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.1e-84 317.8 316 52.5
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.4e-79 300.8 365 50.4
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.1e-79 299.3 226 68.6
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.0e-74 283.1 215 68.4
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 5.4e-71 272.3 217 64.1
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 2.0e-57 227.3 391 36.8
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.2e-55 219.9 153 72.5
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 7.8e-54 215.3 255 47.8
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 7.3e-52 208.8 149 68.5
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.7e-48 197.6 128 78.1
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.9e-48 196.8 144 72.2
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 3.3e-44 183.3 126 72.2
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.8e-43 180.3 137 65.0
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.8e-42 177.6 115 75.7
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.3e-24 118.2 79 74.7
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 2.7e-22 110.5 72 72.2
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 6.7e-21 105.9 150 44.0
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 3.5e-14 83.6 346 24.3
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 1.3e-13 81.6 56 73.2
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 6.7e-13 79.3 49 81.6
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 1.5e-12 78.2 72 62.5
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 6.2e-11 72.8 66 57.6


User provided reference genes

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