Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G012500 Phaseolus vulgaris HOM05D009639 ORTHO05D010690 0.0e+00 1600.1 799 100.0
Glyma.04G124900 Glycine max HOM05D009639 ORTHO05D010690 4.5e-256 888.3 800 62.6
VMungo1080G0201 Vigna mungo HOM05D009639 ORTHO05D010690 3.8e-255 885.2 796 62.7
Glyma.06G313400 Glycine max HOM05D009639 ORTHO05D010690 2.5e-254 882.5 805 62.7
Lj3g0012055 Lotus japonicus HOM05D009639 ORTHO05D010690 2.5e-150 537.0 812 42.1
Psat4g150240 Pisum sativum HOM05D009639 ORTHO05D010690 4.7e-128 463.0 796 40.1
TPR.G24389 Trifolium pratense HOM05D009639 ORTHO05D010690 1.0e-119 435.3 838 38.1
Ca_25852_v3 Cicer arietinum L. HOM05D009639 ORTHO05D010690 7.7e-115 419.1 758 39.2
Medtr3g010860 Medicago truncatula HOM05D009639 ORTHO05D010690 5.2e-111 406.4 814 38.2
Lalb_Chr18g0048201 Lupinus albus HOM05D009639 ORTHO05D010690 1.1e-92 345.5 824 35.1
Psat5g223640 Pisum sativum HOM05D009639 ORTHO05D010690 1.7e-74 285.0 560 37.9
Haze_02948 Corylus avellana HOM05D009639 ORTHO05D010690 2.0e-54 218.4 889 27.7
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 6.0e-51 206.8 845 27.6
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 1.1e-41 176.0 792 26.6
Atru.chr12.1203 Acer truncatum HOM05D009639 ORTHO05D006184 1.0e-34 152.9 843 25.4
Potri.003G188600 Populus trichocarpa HOM05D009639 ORTHO05D010690 1.6e-32 145.6 977 24.4
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 6.1e-27 127.1 154 50.6
CANSAT56G3803 Cannabis sativa HOM05D009639 ORTHO05D010690 6.7e-26 123.6 876 24.9
Sabra03G0137900 Salix brachista HOM05D009639 ORTHO05D010690 6.7e-26 123.6 169 49.1
CiPaw.13G018700 Carya illinoinensis HOM05D009639 ORTHO05D010690 1.1e-25 122.9 306 32.0
Ciclev10002267m.g Citrus clementina HOM05D009639 ORTHO05D010690 1.5e-25 122.5 146 47.9
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 4.8e-24 117.5 136 47.8
Psat5g223680 Pisum sativum HOM05D009639 ORTHO05D010690 1.8e-23 115.5 172 42.4
Manes.11G010500 Manihot esculenta HOM05D009639 ORTHO05D010690 2.6e-22 111.7 134 50.0
Aqoxy1G01630 Aquilegia oxysepala HOM05D028564 ORTHO05D010690 2.3e-18 98.6 140 43.6
Aa31LG10G5240 Aethionema arabicum HOM05D010442 ORTHO05D010690 3.3e-17 94.7 210 34.3
Aqoxy5G04141 Aquilegia oxysepala HOM05D009639 ORTHO05D010690 4.8e-16 90.9 126 44.4
Medtr3g010890 Medicago truncatula HOM05D009639 ORTHO05D010690 3.1e-15 88.2 104 45.2
AL1G55200 Arabidopsis lyrata HOM05D010442 ORTHO05D010690 4.1e-15 87.8 157 39.5
ATR1096G036 Amborella trichopoda HOM05D009639 ORTHO05D010690 9.1e-15 86.7 147 36.1
Carub.0001s3767 Capsella rubella HOM05D010442 ORTHO05D010690 1.5e-14 85.9 161 37.3
Sp1g35500 Schrenkiella parvula HOM05D010442 ORTHO05D010690 2.6e-14 85.1 269 29.4
AT1G48560 Arabidopsis thaliana HOM05D010442 ORTHO05D010690 7.7e-14 83.6 155 37.4
A06p04380 Brassica napus HOM05D010442 ORTHO05D010690 1.1e-12 79.7 211 34.1
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 3.2e-12 78.2 146 36.3
BraA06t23642Z Brassica rapa HOM05D010442 ORTHO05D010690 4.2e-12 77.8 211 34.1
Thhalv10011299m.g Eutrema salsugineum HOM05D010442 ORTHO05D010690 7.2e-12 77.0 141 37.6
Atru.chr12.1201 Acer truncatum HOM05D009639 ORTHO05D010690 2.7e-11 75.1 93 46.2
BcaC08g43056 Brassica carinata HOM05D010442 ORTHO05D010690 2.7e-11 75.1 197 33.0
C06p03150 Brassica napus HOM05D010442 ORTHO05D010690 2.7e-11 75.1 197 33.0
BolC6t35433H Brassica oleracea HOM05D010442 ORTHO05D010690 2.7e-11 75.1 197 33.0
THA.LOC104809844 Tarenaya hassleriana HOM05D010442 ORTHO05D010690 8.0e-11 73.6 152 36.2
BcaB07g33745 Brassica carinata HOM05D010442 ORTHO05D010690 1.8e-10 72.4 132 38.6
SEGI_40933 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 8.8e-10 70.1 255 25.9
Sed0010373 Sechium edule HOM05D003060 ORTHO05D001716 1.6e-06 59.3 130 33.8
arahy.Tifrunner.gnm1.ann1.ALQ29C Arachis hypogaea HOM05D000855 ORTHO05D001716 2.0e-06 58.9 88 39.8
CsaV3_2G006550 Cucumis sativus L. HOM05D003060 ORTHO05D001716 2.6e-06 58.5 177 31.1
MELO3C004230.2 Cucumis melo HOM05D003060 ORTHO05D001716 4.5e-06 57.8 182 30.8
Lj6A674G26 Lonicera japonica HOM05D003060 ORTHO05D001716 5.9e-06 57.4 109 36.7
Lj9C448T5 Lonicera japonica HOM05D000855 ORTHO05D008469 7.7e-06 57.0 122 36.1


User provided reference genes

Program Settings