Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.7e-60 235.7 114 100.0
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.4e-30 136.3 109 71.6
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.7e-29 132.1 109 68.8
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.1e-26 122.5 100 67.0
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.2e-26 120.9 109 65.1
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.1e-25 118.6 100 67.0
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.2e-24 116.7 109 63.3
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.3e-23 113.2 100 64.0
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 1.7e-23 112.8 100 64.0
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 8.4e-23 110.5 100 62.0
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 7.1e-22 107.5 99 59.6
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 7.1e-22 107.5 99 59.6
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.2e-21 106.7 99 59.6
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.2e-21 106.7 110 59.1
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.1e-21 105.9 104 57.7
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 2.1e-21 105.9 99 59.6
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.7e-21 105.5 99 58.6
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 6.0e-21 104.4 104 57.7
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.3e-20 103.2 100 59.0
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 3.0e-20 102.1 99 55.6
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 3.0e-20 102.1 99 59.6
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 6.6e-20 100.9 99 59.6
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.1e-19 100.1 99 56.6
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 3.3e-19 98.6 104 52.9
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 3.3e-19 98.6 109 54.1
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 4.3e-19 98.2 99 54.5
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.3e-19 98.2 99 55.6
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.6e-19 97.8 99 56.6
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 9.6e-19 97.1 99 54.5
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.6e-18 96.3 99 51.5
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 2.1e-18 95.9 98 55.1
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 3.6e-18 95.1 90 60.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 6.2e-18 94.4 99 53.5
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.1e-17 93.6 100 52.0
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 1.8e-17 92.8 99 52.5
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.8e-17 92.8 99 52.5
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 2.4e-17 92.4 99 55.6
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 4.0e-17 91.7 102 51.0
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 5.3e-17 91.3 102 51.0
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 5.3e-17 91.3 99 52.5
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 9.0e-17 90.5 102 51.0
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 9.0e-17 90.5 99 54.5
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.5e-16 89.7 72 61.1
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 1.5e-16 89.7 95 53.7
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 2.6e-16 89.0 99 52.5
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 2.6e-16 89.0 99 52.5
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.4e-16 88.6 67 65.7
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 4.5e-16 88.2 100 54.0
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 5.8e-16 87.8 67 65.7
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.6e-16 87.4 99 52.5
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 9.9e-16 87.0 99 51.5
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 9.9e-16 87.0 108 50.9
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 1.3e-15 86.7 99 54.5
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 3.8e-15 85.1 107 51.4
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.4e-15 84.0 60 66.7
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.4e-14 83.2 104 45.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.9e-14 82.8 102 48.0
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.9e-14 82.8 99 50.5
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.2e-14 81.6 99 46.5
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.2e-14 81.6 67 64.2
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 5.4e-14 81.3 80 60.0
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 5.4e-14 81.3 99 49.5
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 7.1e-14 80.9 99 47.5
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 7.1e-14 80.9 107 46.7
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 7.1e-14 80.9 106 50.9
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 9.3e-14 80.5 99 48.5
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 9.3e-14 80.5 102 48.0
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-13 79.7 102 48.0
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-13 79.7 102 48.0
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.6e-13 79.7 102 48.0
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.6e-13 79.7 102 48.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 1.6e-13 79.7 102 48.0
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.1e-13 79.3 99 48.5
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 2.7e-13 79.0 107 45.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.7e-13 79.0 83 57.8
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.7e-13 79.0 102 47.1
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 2.7e-13 79.0 99 47.5
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 3.5e-13 78.6 107 44.9
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 3.5e-13 78.6 102 47.1
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 3.5e-13 78.6 107 45.8
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.5e-13 78.6 99 48.5
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 3.5e-13 78.6 99 49.5
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 6.0e-13 77.8 99 46.5
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.9e-13 77.4 62 64.5
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 7.9e-13 77.4 102 46.1
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 1.8e-12 76.3 99 45.5
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 3.0e-12 75.5 104 47.1
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.9e-12 75.1 99 46.5
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 6.7e-12 74.3 99 45.5
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 8.7e-12 73.9 102 45.1
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.1e-11 73.6 67 56.7
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.5e-11 73.2 60 65.0
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 5.6e-11 71.2 93 48.4
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 5.6e-11 71.2 102 39.2
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 5.6e-11 71.2 99 44.4
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 7.4e-11 70.9 99 44.4
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 3.6e-10 68.6 61 59.0
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 6.2e-10 67.8 95 43.2
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 6.2e-10 67.8 65 52.3
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 8.1e-10 67.4 61 60.7
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.1e-09 67.0 61 52.5
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 4.0e-09 65.1 102 43.1
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.6e-08 62.4 61 55.7
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 3.4e-08 62.0 67 52.2
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 4.5e-08 61.6 105 40.0
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.8e-08 61.2 51 62.7
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 9.9e-08 60.5 91 46.2
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 9.9e-08 60.5 67 52.2


User provided reference genes

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