Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 1.9e-270 935.3 471 100.0
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 3.8e-255 884.4 488 92.8
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 3.8e-239 831.2 505 85.9
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 1.4e-217 759.6 495 80.8
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 2.7e-200 702.2 492 72.4
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 6.4e-194 681.0 493 70.6
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 6.7e-183 644.4 483 68.5
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 9.9e-179 630.6 484 67.4
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.3e-175 620.2 492 64.0
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 7.6e-171 604.4 498 64.1
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 7.6e-171 604.4 498 64.1
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 1.8e-167 593.2 499 62.9
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 3.4e-147 525.8 466 62.9
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.1e-144 516.5 490 56.1
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.0e-142 510.0 490 55.7
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 7.4e-142 508.1 479 58.9
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 7.4e-142 508.1 497 54.9
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 3.7e-141 505.8 476 59.0
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 4.8e-141 505.4 498 55.8
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 9.1e-140 501.1 497 54.3
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.7e-138 496.9 496 54.6
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.2e-138 496.5 484 55.8
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 3.8e-138 495.7 496 55.4
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 8.5e-138 494.6 495 54.9
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 1.5e-137 493.8 490 53.1
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.9e-137 493.4 486 55.3
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 3.2e-137 492.7 499 53.9
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 3.2e-137 492.7 483 54.7
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 4.2e-137 492.3 492 53.3
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 7.2e-137 491.5 496 53.2
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.6e-136 490.3 499 51.7
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.6e-136 490.3 496 54.2
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 1.6e-136 490.3 494 53.0
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 2.1e-136 490.0 491 52.5
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 2.7e-136 489.6 490 53.1
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 4.7e-136 488.8 496 54.2
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.0e-135 486.1 493 54.0
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 6.7e-135 485.0 496 52.6
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.2e-134 484.2 494 53.6
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.0e-134 483.4 494 53.6
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 2.6e-134 483.0 497 52.9
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 4.4e-134 482.3 494 53.6
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.7e-134 481.9 493 53.5
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 7.5e-134 481.5 484 53.5
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 5.9e-131 471.9 496 51.8
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 2.9e-130 469.5 491 51.9
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 2.1e-128 463.4 494 51.8
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 2.7e-128 463.0 497 51.1
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 3.6e-128 462.6 487 51.5
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 8.0e-128 461.5 480 50.8
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 8.0e-128 461.5 493 49.3
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 4.0e-127 459.1 495 50.7
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 5.2e-127 458.8 498 51.2
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 4.8e-125 452.2 494 50.0
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 1.1e-124 451.1 477 50.3
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 2.4e-124 449.9 491 50.3
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 4.1e-124 449.1 484 50.2
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 9.1e-124 448.0 482 50.2
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 1.2e-123 447.6 474 51.1
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.6e-123 447.2 496 49.0
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 4.5e-123 445.7 471 49.9
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 4.5e-123 445.7 497 48.3
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 1.0e-122 444.5 480 49.2
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.0e-122 444.5 496 48.8
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.7e-122 443.7 497 48.5
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 2.3e-122 443.4 495 51.5
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 8.6e-122 441.4 487 48.9
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 3.3e-121 439.5 476 48.3
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 4.2e-121 439.1 481 50.1
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 9.5e-121 438.0 402 58.0
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.8e-120 436.4 486 48.4
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 3.6e-120 436.0 485 48.7
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 3.6e-120 436.0 488 49.2
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 8.0e-120 434.9 486 48.4
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 8.9e-119 431.4 480 48.1
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 1.2e-118 431.0 484 48.3
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.5e-118 430.6 488 47.7
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 1.3e-117 427.6 368 59.8
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.7e-117 427.2 483 49.5
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.2e-117 426.8 480 47.5
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 6.3e-117 425.2 486 47.3
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 2.4e-116 423.3 480 48.1
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 7.0e-116 421.8 485 47.2
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 9.2e-116 421.4 492 47.0
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 2.0e-115 420.2 487 47.0
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.0e-114 417.9 479 46.8
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 1.7e-114 417.2 486 48.4
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.9e-114 416.4 480 46.2
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 3.8e-114 416.0 525 43.4
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 6.6e-114 415.2 480 48.3
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 8.6e-114 414.8 484 48.1
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.5e-113 414.1 497 46.5
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.5e-113 414.1 494 47.4
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.9e-113 413.7 478 48.3
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 3.3e-113 412.9 368 58.4
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 5.6e-113 412.1 488 46.3
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 7.3e-113 411.8 480 48.1
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 6.1e-112 408.7 475 47.8
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.8e-111 407.1 467 49.0
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 5.2e-111 405.6 378 54.8
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 3.7e-109 399.4 498 45.8
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 1.1e-108 397.9 497 44.9
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 1.4e-108 397.5 497 45.9
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 5.4e-108 395.6 282 70.6
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.2e-107 394.4 493 45.2
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 5.0e-106 389.0 289 68.2
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 6.6e-106 388.7 287 68.3
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 8.6e-106 388.3 497 44.7
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 4.0e-103 379.4 242 81.4
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 8.9e-103 378.3 266 70.7
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 8.9e-103 378.3 490 45.3
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 5.4e-100 369.0 484 43.8
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 2.1e-99 367.1 494 44.9
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 1.7e-90 337.4 439 44.0
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 1.7e-90 337.4 345 51.9
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 3.9e-90 336.3 465 39.8
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 4.7e-88 329.3 531 37.1
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 6.8e-87 325.5 290 62.4
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 8.4e-85 318.5 467 40.0
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.4e-84 317.8 404 44.3
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 4.2e-84 316.2 320 53.1
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.5e-81 307.8 467 40.0
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 1.6e-80 304.3 465 40.6
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 4.7e-80 302.8 389 44.2
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 8.4e-77 292.0 407 43.7
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 1.1e-73 281.6 164 80.5
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.5e-73 280.4 351 46.4
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 1.2e-70 271.6 470 36.4
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 7.6e-70 268.9 348 45.1
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 3.9e-66 256.5 272 49.3
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 1.1e-65 255.0 332 46.7
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 2.8e-64 250.4 209 64.1
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 3.7e-64 250.0 189 68.3
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.8e-63 247.7 345 40.9
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 1.2e-62 245.0 433 40.6
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 5.5e-60 236.1 461 33.8
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 1.0e-58 231.9 190 59.5
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.1e-57 228.4 419 33.9
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 2.5e-57 227.3 538 31.6
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 8.4e-53 212.2 595 28.7
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 1.4e-52 211.5 469 31.3
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 9.3e-52 208.8 461 30.4
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 3.0e-50 203.8 501 29.5
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 5.7e-49 199.5 257 44.0
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 9.7e-49 198.7 171 59.6
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 8.2e-48 195.7 122 75.4
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 8.2e-48 195.7 216 48.1
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 1.2e-46 191.8 487 30.2
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 6.5e-45 186.0 324 36.4
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.6e-43 180.3 372 30.9
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 2.8e-40 170.6 163 60.1
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 8.2e-40 169.1 381 31.2
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 3.4e-38 163.7 232 38.8
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 2.9e-37 160.6 320 35.3
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 2.6e-33 147.5 460 29.1
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 2.2e-32 144.4 126 57.9
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 2.2e-32 144.4 216 38.9
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 1.1e-31 142.1 249 38.2
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.0e-30 137.9 97 67.0
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 1.6e-27 128.3 150 48.0
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 2.1e-27 127.9 90 65.6
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 5.7e-25 119.8 118 54.2
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea HOM05D001952 ORTHO05D004913 5.3e-23 113.2 121 52.9
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 2.9e-21 107.5 289 32.5
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 8.5e-21 105.9 126 44.4
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 3.2e-20 104.0 125 44.0
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 3.0e-18 97.4 113 39.8
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 8.8e-18 95.9 89 52.8
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 1.1e-12 79.0 174 25.9
FAN03G1970 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.3e-08 63.2 72 43.1


User provided reference genes

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