Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 7.1e-173 610.5 312 100.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.5e-146 523.1 311 83.9
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 3.5e-140 501.9 311 81.4
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.4e-135 485.3 311 79.4
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 3.6e-124 448.7 317 72.9
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 4.6e-124 448.4 306 73.5
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 6.7e-123 444.5 309 72.8
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.1e-117 427.2 307 68.7
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 9.4e-117 424.1 309 69.6
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 1.7e-113 413.3 291 67.7
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.7e-113 413.3 311 65.6
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 1.8e-112 409.8 281 70.8
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 1.5e-111 406.8 294 66.3
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.0e-111 406.4 307 65.5
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 1.3e-110 403.7 290 66.6
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 2.9e-110 402.5 294 65.0
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 2.9e-110 402.5 306 64.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 3.8e-110 402.1 345 62.9
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 8.5e-110 401.0 290 65.5
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.4e-109 400.2 292 66.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.8e-107 393.3 296 64.5
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 2.3e-107 392.9 311 63.0
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 5.2e-107 391.7 290 64.5
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 2.0e-106 389.8 297 63.6
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.2e-105 386.3 290 63.4
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 4.8e-105 385.2 290 65.5
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.1e-104 384.0 291 63.2
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.4e-104 383.6 291 63.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 3.1e-104 382.5 289 61.9
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 4.1e-104 382.1 290 64.5
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 4.1e-104 382.1 309 59.9
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.1e-104 382.1 311 60.1
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 9.1e-104 380.9 312 60.9
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 2.0e-103 379.8 286 62.6
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.6e-103 379.4 288 62.2
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 2.6e-103 379.4 290 63.1
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.0e-102 377.5 290 62.8
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.7e-102 376.7 291 63.2
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 5.0e-102 375.2 287 63.4
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 1.6e-100 370.2 294 60.2
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 2.7e-100 369.4 297 59.9
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 3.0e-99 365.9 286 61.2
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 2.6e-98 362.8 293 61.1
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 9.7e-98 360.9 299 57.9
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 9.7e-98 360.9 293 57.7
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.4e-96 357.1 293 57.3
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 4.1e-96 355.5 299 59.5
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.0e-96 354.8 271 65.7
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 7.0e-96 354.8 280 60.4
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.2e-95 354.0 293 57.0
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.0e-95 353.2 266 64.3
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 2.7e-95 352.8 290 59.0
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 5.9e-95 351.7 310 56.8
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 1.7e-94 350.1 308 55.5
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 1.7e-94 350.1 306 55.6
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 2.2e-94 349.7 293 56.0
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 2.9e-94 349.4 305 56.4
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 1.2e-92 344.0 292 56.5
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.4e-91 340.5 288 59.7
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.8e-91 340.1 292 54.5
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.3e-91 339.7 293 54.6
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 5.2e-91 338.6 344 52.6
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 6.8e-91 338.2 292 54.5
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 3.4e-90 335.9 287 56.1
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 9.1e-88 327.8 286 54.5
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.3e-86 323.9 286 53.8
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.9e-86 322.8 290 54.8
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 5.0e-86 322.0 286 53.8
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.1e-85 320.9 237 64.6
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.1e-84 316.6 290 55.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.8e-83 313.5 244 61.9
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 3.0e-83 312.8 302 50.0
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 8.8e-83 311.2 293 56.0
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.7e-81 307.0 277 56.3
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.1e-80 302.4 293 53.6
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 2.7e-79 299.7 204 74.5
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.5e-79 298.9 290 55.5
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 8.6e-78 294.7 325 49.5
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 1.2e-76 290.8 209 71.8
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.6e-74 283.1 203 67.0
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 2.4e-72 276.6 210 65.2
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.9e-69 266.9 290 43.1
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 2.0e-66 256.9 204 62.3
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 7.5e-66 255.0 204 60.8
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 5.4e-64 248.8 323 44.6
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 3.9e-62 242.7 270 49.6
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.7e-60 235.7 271 49.8
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.2e-58 231.1 239 51.5
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 1.8e-51 207.2 308 39.0
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.0e-46 191.4 299 39.8
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.3e-46 190.3 288 41.0
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.5e-45 186.8 158 57.6
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 8.1e-44 181.8 121 71.1
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 1.4e-40 171.0 210 41.4
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.9e-40 170.6 290 35.9
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 3.3e-37 159.8 134 59.7
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 3.6e-36 156.4 295 32.9
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 4.9e-33 146.0 100 67.0
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 4.6e-31 139.4 110 60.0
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 7.9e-31 138.7 95 69.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 3.7e-28 129.8 90 68.9
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.4e-27 127.1 109 55.0
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 2.6e-26 123.6 87 65.5
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.1e-24 118.2 148 38.5
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 7.1e-24 115.5 79 62.0
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 1.0e-22 111.7 78 69.2
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 6.7e-22 109.0 287 29.6
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 2.8e-20 103.6 178 37.6
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.5e-18 96.3 89 55.1
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.8e-17 93.2 89 53.9
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 2.1e-15 87.4 77 54.5
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 3.9e-14 83.2 65 56.9
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 1.0e-09 68.6 138 34.1
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 2.7e-07 60.5 217 24.9
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.9e-07 58.9 152 30.3
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.0e-06 58.5 152 30.3
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.0e-06 58.5 152 30.3


User provided reference genes

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