Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 2.6e-195 685.3 358 100.0
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.0e-167 593.6 362 87.3
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 1.2e-123 447.2 354 72.0
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.4e-118 428.7 351 67.5
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 3.1e-116 422.5 339 67.3
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 3.1e-108 396.0 355 63.4
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.1e-100 370.9 358 58.7
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.8e-100 370.2 359 60.2
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 6.8e-95 351.7 372 55.9
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 4.7e-88 328.9 351 53.8
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 2.3e-87 326.6 362 52.2
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 9.8e-86 321.2 282 66.3
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.7e-85 320.5 371 50.9
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.4e-84 316.6 367 51.2
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 6.0e-83 312.0 362 48.6
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.3e-82 310.8 363 50.7
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 2.5e-81 306.6 363 47.7
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.6e-80 303.9 347 49.3
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.8e-79 300.4 361 49.0
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.2e-78 297.7 357 49.3
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.1e-76 291.2 349 48.1
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.1e-76 289.3 368 47.8
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 5.4e-76 288.9 362 47.8
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 2.1e-75 287.0 345 48.4
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.6e-75 285.8 366 47.3
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 1.0e-74 284.6 345 49.6
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.3e-74 283.5 346 46.8
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 2.3e-74 283.5 343 47.5
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.0e-74 282.3 348 47.4
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.9e-73 280.4 349 47.6
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 4.3e-73 279.3 347 49.0
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.6e-73 278.9 349 47.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 5.2e-71 272.3 352 46.0
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.5e-70 270.8 380 45.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 9.9e-70 268.1 350 48.9
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.9e-68 263.8 347 46.7
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 3.2e-68 263.1 327 46.8
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 9.2e-68 261.5 393 43.3
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 2.1e-67 260.4 356 46.3
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 2.7e-67 260.0 350 44.3
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 7.8e-67 258.5 364 43.4
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 2.3e-66 256.9 353 45.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 2.5e-65 253.4 351 45.6
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 3.3e-65 253.1 351 44.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 2.1e-64 250.4 351 45.3
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 2.1e-64 250.4 343 44.3
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 5.2e-63 245.7 353 43.6
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 8.9e-63 245.0 343 44.0
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 3.4e-62 243.0 352 45.7
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 7.6e-62 241.9 345 43.2
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.9e-61 240.0 341 44.9
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 4.9e-61 239.2 311 46.3
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 6.4e-61 238.8 384 42.2
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.4e-61 238.8 349 42.7
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.9e-60 237.3 344 43.3
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.4e-60 235.7 344 43.3
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 9.2e-60 235.0 355 44.2
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 2.3e-58 230.3 366 41.0
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 3.9e-58 229.6 348 42.0
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 2.5e-57 226.9 342 41.2
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 4.7e-56 222.6 344 41.9
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 8.1e-56 221.9 349 41.8
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 4.0e-55 219.5 364 40.9
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 5.2e-55 219.2 363 41.3
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 1.1e-52 211.5 346 41.6
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.4e-52 211.1 341 43.1
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 1.4e-52 211.1 347 42.7
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.4e-52 210.3 341 42.5
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 4.2e-52 209.5 369 38.5
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 5.4e-52 209.1 344 41.3
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 5.4e-52 209.1 367 37.3
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 9.3e-52 208.4 349 40.7
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 9.3e-52 208.4 352 38.1
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.2e-51 208.0 348 41.4
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.6e-51 207.6 347 41.5
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.6e-51 207.6 263 45.2
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.6e-51 207.6 393 38.7
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 3.5e-51 206.5 351 41.0
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 1.0e-50 204.9 347 42.4
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 8.7e-50 201.8 345 42.0
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 1.1e-49 201.4 347 42.1
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 5.6e-49 199.1 453 34.4
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 9.6e-49 198.4 345 41.4
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.3e-48 198.0 347 40.9
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.1e-48 197.2 204 53.4
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 3.6e-48 196.4 350 39.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 4.8e-48 196.1 347 42.4
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.4e-47 194.5 352 39.8
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.4e-47 194.5 334 37.7
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 4.0e-47 193.0 346 38.2
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 6.9e-47 192.2 325 39.1
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 1.5e-46 191.0 365 37.3
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.9e-45 186.8 282 42.2
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 3.8e-45 186.4 307 38.8
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 6.4e-45 185.7 365 35.9
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 8.4e-45 185.3 282 40.8
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 3.2e-44 183.3 342 38.9
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 7.1e-44 182.2 306 37.3
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 1.6e-43 181.0 359 37.6
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 2.3e-42 177.2 343 35.3
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 5.6e-41 172.6 313 38.0
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 1.5e-38 164.5 312 35.6
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.0e-38 164.1 306 39.2
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 3.8e-37 159.8 351 35.3
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 3.8e-37 159.8 280 39.3
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 8.4e-37 158.7 270 37.0
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.8e-34 151.0 252 39.7
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.8e-34 151.0 209 43.1
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 2.3e-34 150.6 188 47.3
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 8.7e-34 148.7 344 37.8
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 1.1e-33 148.3 354 31.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 5.6e-33 146.0 317 35.3
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.6e-30 137.1 195 43.1
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 2.2e-29 134.0 355 32.4
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 7.9e-27 125.6 119 52.1
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 8.7e-26 122.1 220 39.5
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 8.7e-26 122.1 220 39.5
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 8.7e-26 122.1 220 39.5
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 8.7e-26 122.1 225 39.1
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.9e-25 120.9 299 29.8
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.4e-23 114.8 211 39.3
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 5.0e-21 106.3 215 34.0
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 1.4e-20 104.8 209 37.3
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 4.3e-17 93.2 165 35.8
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.2e-16 90.9 393 27.0
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 2.8e-16 90.5 400 27.0
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 3.1e-15 87.0 144 37.5
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 3.1e-15 87.0 105 41.9
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.5e-14 84.7 103 42.7
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.3e-13 81.6 210 30.5
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 6.5e-13 79.3 90 51.1
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.5e-12 77.4 66 54.5
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.0e-10 72.0 99 47.5
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.4e-10 71.6 66 51.5
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.2e-08 64.3 220 24.5
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.5e-06 58.2 38 76.3


User provided reference genes

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