Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.1e-310 1068.1 522 100.0
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 1.1e-271 939.5 522 87.0
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.3e-267 926.0 522 86.2
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.2e-257 892.9 529 84.7
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 8.8e-253 876.7 525 80.8
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.7e-251 872.5 522 78.2
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 4.1e-250 867.8 523 80.3
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.6e-246 855.9 522 77.6
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 3.6e-246 854.7 516 78.5
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.0e-245 853.2 514 77.8
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.1e-242 843.2 517 77.2
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 1.1e-242 843.2 516 76.7
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.4e-242 842.8 554 76.0
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.4e-242 840.9 516 77.7
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 7.0e-242 840.5 519 76.3
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 7.0e-242 840.5 516 77.5
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 7.8e-241 837.0 517 76.0
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.7e-240 835.9 514 76.1
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 8.6e-240 833.6 519 75.7
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 4.3e-239 831.2 517 76.0
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 8.9e-237 823.5 519 75.1
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 1.5e-236 822.8 519 76.3
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 7.5e-236 820.5 519 74.6
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 7.5e-236 820.5 519 75.1
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 3.7e-235 818.1 490 78.4
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 4.9e-235 817.8 519 74.4
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 6.4e-235 817.4 519 75.1
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 8.3e-235 817.0 519 74.4
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 3.2e-234 815.1 519 76.1
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 1.2e-233 813.1 519 74.8
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.2e-233 813.1 519 74.4
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.0e-233 812.4 519 74.2
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 6.0e-233 810.8 519 74.8
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 1.3e-232 809.7 521 74.3
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 1.3e-232 809.7 519 74.8
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.3e-232 808.9 519 73.8
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 3.0e-232 808.5 519 74.6
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 3.0e-232 808.5 517 74.3
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.9e-232 808.1 519 73.8
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.5e-231 806.2 520 74.4
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 3.3e-231 805.1 519 74.4
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 5.6e-231 804.3 515 74.6
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 7.3e-231 803.9 519 73.8
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 9.5e-231 803.5 520 73.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 1.6e-230 802.7 517 74.3
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.1e-230 802.4 520 73.5
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 2.1e-230 802.4 519 73.8
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.1e-230 802.4 519 73.8
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 2.8e-230 802.0 519 74.6
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.7e-230 801.2 515 74.6
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 6.2e-230 800.8 519 72.6
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 6.2e-230 800.8 520 73.5
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 8.0e-230 800.4 519 72.6
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.1e-229 800.0 544 70.8
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.4e-229 799.7 510 75.1
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.8e-229 799.3 520 73.3
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 3.1e-229 798.5 520 73.8
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 4.0e-229 798.1 520 72.7
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 8.9e-229 797.0 514 74.9
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-228 796.6 519 73.6
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.2e-228 796.6 526 73.0
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.2e-228 796.6 519 73.6
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.2e-228 796.6 519 73.6
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.5e-228 796.2 524 73.1
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.0e-228 795.8 524 73.3
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.8e-228 793.5 553 70.7
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.3e-227 793.1 519 74.6
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.7e-227 792.7 518 72.4
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 3.7e-227 791.6 545 70.8
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 4.9e-227 791.2 518 72.2
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 4.9e-227 791.2 519 72.6
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 8.3e-227 790.4 509 75.0
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 8.3e-227 790.4 520 73.1
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.9e-226 789.3 524 72.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.4e-226 788.9 517 71.8
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 2.4e-226 788.9 518 72.0
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.4e-226 788.9 518 72.2
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.4e-226 788.9 517 71.8
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 2.4e-226 788.9 518 72.0
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.9
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.3
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.5
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.5
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 7.0e-226 787.3 509 74.9
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 7.0e-226 787.3 529 72.4
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 9.2e-226 786.9 520 71.5
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 1.6e-225 786.2 520 71.3
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 2.0e-225 785.8 518 71.6
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.0e-225 785.8 529 72.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.7e-224 782.7 519 72.8
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 8.6e-224 780.4 519 73.4
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.9e-223 779.2 519 72.1
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.5e-223 778.9 519 73.4
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 3.3e-223 778.5 518 72.0
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 5.6e-223 777.7 521 71.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 7.3e-223 777.3 519 71.3
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.2e-222 776.5 516 74.0
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 1.6e-222 776.2 519 72.8
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 2.1e-222 775.8 519 72.8
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 3.6e-222 775.0 470 77.7
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 4.7e-222 774.6 521 73.1
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 3.1e-221 771.9 520 72.5
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 3.1e-221 771.9 519 72.3
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 1.5e-220 769.6 519 72.3
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 2.6e-220 768.8 527 70.4
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 3.4e-220 768.5 520 70.6
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 7.5e-220 767.3 470 77.2
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.7e-219 766.1 519 72.3
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.7e-219 765.0 543 69.6
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 6.4e-219 764.2 516 71.5
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 1.1e-218 763.5 520 70.4
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 7.1e-218 760.8 484 75.0
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 7.1e-218 760.8 472 77.5
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 9.2e-218 760.4 467 77.9
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 9.2e-218 760.4 516 69.8
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 1.9e-215 752.7 519 69.7
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 6.2e-214 747.7 522 69.7
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 1.5e-212 743.0 514 69.5
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 2.0e-212 742.7 465 76.3
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 1.7e-211 739.6 515 68.9
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.7e-211 739.6 519 69.7
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.4e-211 737.3 516 69.4
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.1e-210 736.9 465 75.5
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 1.4e-210 736.5 515 68.7
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 5.4e-210 734.6 519 69.9
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 7.8e-209 730.7 474 73.4
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 1.3e-208 729.9 520 68.7
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 3.0e-208 728.8 549 67.8
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.3e-207 725.3 519 69.2
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.8e-205 719.5 473 72.3
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 2.0e-204 716.1 519 67.8
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 9.9e-204 713.8 519 67.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.6e-201 706.4 519 66.1
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.9e-199 699.5 574 61.7
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.3e-199 698.7 519 66.1
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 3.1e-197 692.2 560 63.6
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.2e-196 690.3 519 66.7
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 8.4e-195 684.1 521 65.6
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 5.3e-189 664.8 521 63.5
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 3.3e-183 645.6 499 65.7
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-181 639.8 381 79.0
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 5.1e-176 621.7 377 77.2
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 8.7e-176 620.9 478 65.7
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.6e-174 616.7 380 76.8
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 2.2e-174 616.3 481 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 2.3e-168 596.3 485 59.6
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 2.0e-164 583.2 446 61.0
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 2.3e-160 569.7 560 54.8
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 4.1e-157 558.9 512 55.5
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 3.2e-146 522.7 478 55.9
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 7.2e-138 495.0 352 69.0
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.0e-131 474.6 291 79.0
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 3.3e-122 443.0 294 70.7
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.7e-121 439.1 292 71.6
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 9.5e-114 414.8 262 74.0
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.6e-113 414.1 287 72.5
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 9.8e-111 404.8 288 71.2
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 1.9e-101 374.0 250 71.6
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 8.6e-99 365.2 242 72.3
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.1e-72 278.5 204 66.7
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 1.2e-55 221.9 403 34.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 9.4e-53 212.2 476 33.0
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 7.9e-52 209.1 132 72.0
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 7.4e-34 149.4 206 43.2
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.1e-32 145.6 109 63.3
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.2e-29 133.7 143 47.6
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 3.5e-23 114.0 85 62.4
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.4e-19 102.1 143 46.9
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 1.2e-18 99.0 149 37.6
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 4.4e-18 97.1 57 73.7
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 5.7e-18 96.7 60 71.7
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.8e-11 75.1 165 39.4
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 2.7e-07 61.2 55 58.2


User provided reference genes

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