Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G169400 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 1.1e-86 323.2 158 100.0
VMungo0464G0927 Vigna mungo HOM05D022012 ORTHO05D003856 3.6e-72 275.0 185 75.1
Phvul.004G029250 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 2.1e-64 249.2 137 84.7
VMungo0464G0934 Vigna mungo HOM05D022012 ORTHO05D003856 5.0e-50 201.4 155 61.3
Phvul.004G169500 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 3.4e-46 188.7 157 58.0
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.7e-13 80.1 125 37.6
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.7e-13 80.1 125 37.6
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.2e-13 79.7 119 37.8
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 6.4e-13 78.2 125 36.8
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 6.4e-13 78.2 124 37.9
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 1.4e-12 77.0 98 36.7
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 2.4e-12 76.3 124 36.3
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 4.1e-12 75.5 125 36.0
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 5.4e-12 75.1 116 36.2
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 7.1e-12 74.7 123 35.8
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.2e-11 73.9 98 44.9
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 2.7e-11 72.8 123 36.6
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 3.5e-11 72.4 124 36.3
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 6.0e-11 71.6 122 36.9
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 6.0e-11 71.6 97 44.3
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 6.0e-11 71.6 88 38.6
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 7.8e-11 71.2 116 37.1
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.8e-11 71.2 116 37.1
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.8e-11 71.2 116 37.1
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.0e-10 70.9 124 34.7
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.0e-10 70.9 122 36.9
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 1.3e-10 70.5 112 34.8
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 2.3e-10 69.7 157 31.8
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.3e-10 69.7 116 38.8
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 2.3e-10 69.7 88 37.5
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 3.9e-10 68.9 104 40.4
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 3.9e-10 68.9 125 35.2
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 5.1e-10 68.6 103 35.9
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 8.6e-10 67.8 117 31.6
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.1e-09 67.4 116 33.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-09 67.4 116 32.8
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.9e-09 66.6 125 34.4
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.3e-09 65.5 111 36.0
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 9.5e-09 64.3 98 42.9
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 9.5e-09 64.3 98 42.9
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 1.2e-08 63.9 98 42.9
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.2e-08 63.9 98 42.9
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 1.2e-08 63.9 123 31.7
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 1.6e-08 63.5 98 42.9
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 8.1e-08 61.2 111 35.1
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 8.1e-08 61.2 83 39.8
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 8.1e-08 61.2 90 42.2
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 1.8e-07 60.1 94 35.1
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.8e-07 60.1 89 37.1
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 2.3e-07 59.7 100 33.0
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 4.0e-07 58.9 76 35.5
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 5.2e-07 58.5 82 36.6
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 6.8e-07 58.2 84 33.3
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 1.2e-06 57.4 91 29.7
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.0e-06 56.6 89 33.7
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 2.6e-06 56.2 89 33.7
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.6e-06 56.2 89 33.7
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 2.6e-06 56.2 89 33.7
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 5.8e-06 55.1 113 31.0
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 7.6e-06 54.7 75 36.0
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 9.9e-06 54.3 78 37.2
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 9.9e-06 54.3 73 41.1


User provided reference genes

Program Settings