Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G167600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.4e-147 525.4 254 100.0
Phvul.004G167400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.5e-85 318.5 240 67.5
Phvul.004G166800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 3.6e-82 308.9 241 67.6
VMungo0464G0009 Vigna mungo HOM05D008069 ORTHO05D010454 8.6e-60 234.6 249 53.0
VMungo0464G1791 Vigna mungo HOM05D008069 ORTHO05D010454 8.6e-60 234.6 244 52.0
Phvul.004G167200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.3e-52 210.7 247 53.0
Phvul.004G167500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.1e-50 203.4 237 52.3
Phvul.004G167800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.7e-39 167.2 146 58.9
VMungo0464G2170 Vigna mungo HOM05D008069 ORTHO05D010454 3.9e-36 156.0 259 37.8
Phvul.004G166700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.3e-33 146.7 255 35.7
VMungo0464G0022 Vigna mungo HOM05D008069 ORTHO05D010454 2.1e-29 133.7 249 34.1
VMungo0464G1927 Vigna mungo HOM05D008069 ORTHO05D010454 6.0e-29 132.1 241 36.5
Phvul.004G167900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.6e-28 128.6 257 32.7
Phvul.004G164200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 8.6e-28 128.3 223 34.5
Glyma.09G193100 Glycine max HOM05D008069 ORTHO05D010454 5.6e-27 125.6 265 32.1
Phvul.004G167066 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.1e-26 123.6 105 61.9
Phvul.004G164100 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 3.6e-26 122.9 233 35.6
Glyma.07G083800 Glycine max HOM05D008069 ORTHO05D010454 6.9e-25 118.6 251 33.1
Phvul.004G167700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.2e-24 117.9 152 39.5
Glyma.01G145200 Glycine max HOM05D008069 ORTHO05D010454 2.6e-24 116.7 247 31.6
Phvul.004G164350 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.2e-23 113.6 235 33.2
Phvul.004G167000 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.4e-23 112.1 121 46.3
Phvul.004G164400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.2e-22 109.4 228 33.8
VMungo0464G1789 Vigna mungo HOM05D008069 ORTHO05D010454 7.1e-22 108.6 203 35.0
Phvul.004G164300 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.2e-21 107.8 133 40.6
TPR.G34909 Trifolium pratense HOM05D008069 ORTHO05D010454 2.7e-21 106.7 231 29.9
VMungo0464G1478 Vigna mungo HOM05D008069 ORTHO05D010454 1.3e-20 104.4 225 31.1
Phvul.004G166500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.7e-20 104.0 260 29.2
VMungo0464G1239 Vigna mungo HOM05D008069 ORTHO05D010454 1.7e-20 104.0 195 31.3
VMungo0464G1569 Vigna mungo HOM05D008069 ORTHO05D010454 5.1e-20 102.4 118 42.4
VMungo0464G1879 Vigna mungo HOM05D008069 ORTHO05D010454 8.7e-20 101.7 211 34.6
VMungo0464G0186 Vigna mungo HOM05D008069 ORTHO05D010454 1.1e-19 101.3 209 30.6
TPR.G34917 Trifolium pratense HOM05D008069 ORTHO05D010454 2.5e-19 100.1 196 32.1
Glyma.12G013900 Glycine max HOM05D008069 ORTHO05D010454 3.3e-19 99.8 114 48.2
VMungo0464G0570 Vigna mungo HOM05D008069 ORTHO05D010454 5.6e-19 99.0 210 32.4
Psat1g044800 Pisum sativum HOM05D008069 ORTHO05D010454 7.3e-19 98.6 251 29.9
VMungo0464G0900 Vigna mungo HOM05D008069 ORTHO05D010454 7.3e-19 98.6 156 37.2
Phvul.004G167132 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 8.1e-18 95.1 102 53.9
Medtr6g488200 Medicago truncatula HOM05D008069 ORTHO05D010454 1.5e-16 90.9 195 32.8
Phvul.004G167301 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.0e-16 90.5 163 39.3
VMungo0464G1590 Vigna mungo HOM05D008069 ORTHO05D010454 2.6e-16 90.1 103 39.8
Phvul.004G166900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 5.8e-16 89.0 213 28.6
Psat1g044880 Pisum sativum HOM05D008069 ORTHO05D010454 1.3e-15 87.8 97 44.3
VMungo0464G0330 Vigna mungo HOM05D008069 ORTHO05D010454 1.3e-15 87.8 90 45.6
Phvul.004G166650 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.7e-15 87.4 101 43.6
Medtr6g488190 Medicago truncatula HOM05D008069 ORTHO05D036741 1.1e-14 84.7 206 28.6
VMungo0464G0710 Vigna mungo HOM05D008069 ORTHO05D010454 7.1e-14 82.0 75 44.0
Medtr6g488240 Medicago truncatula HOM05D008069 ORTHO05D010454 4.6e-13 79.3 109 34.9
arahy.Tifrunner.gnm1.ann1.QM4YUX Arachis hypogaea HOM05D011871 ORTHO05D016668 3.3e-11 73.2 100 44.0
arahy.Tifrunner.gnm1.ann1.K5L5ZN Arachis hypogaea HOM05D011871 ORTHO05D016668 7.4e-11 72.0 100 43.0
Lj6g0011442 Lotus japonicus HOM05D011871 ORTHO05D016668 9.6e-11 71.6 101 42.6
Phvul.004G166600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.8e-10 70.1 54 53.7
Phvul.009G256700 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 3.6e-10 69.7 99 41.4
Phvul.009G256600 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 6.2e-10 68.9 98 40.8
VMungo1309G1092 Vigna mungo HOM05D011871 ORTHO05D016668 2.4e-09 67.0 98 38.8
Glyma.09G037000 Glycine max HOM05D011871 ORTHO05D016668 3.1e-09 66.6 98 39.8
Medtr6g488260 Medicago truncatula HOM05D008069 ORTHO05D010454 3.1e-09 66.6 206 26.7
Phvul.009G255800 Phaseolus vulgaris HOM05D019142 ORTHO05D022765 7.6e-08 62.0 210 25.2
Psat1g041760 Pisum sativum HOM05D008069 ORTHO05D010454 7.6e-08 62.0 176 33.0
Lj6g0008892 Lotus japonicus HOM05D008069 ORTHO05D010454 1.7e-07 60.8 89 34.8
Phvul.009G256800 Phaseolus vulgaris HOM05D011871 ORTHO05D010454 1.7e-07 60.8 105 31.4
Medtr2g034410 Medicago truncatula HOM05D011871 ORTHO05D016668 4.9e-07 59.3 87 39.1
Ca_25547_v3 Cicer arietinum L. HOM05D008069 ORTHO05D010454 6.4e-07 58.9 59 40.7


User provided reference genes

Program Settings