Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G167400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.7e-174 614.4 303 100.0
Phvul.004G166800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.2e-118 429.5 297 73.7
Phvul.004G167600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.1e-85 318.9 240 67.5
VMungo0464G1791 Vigna mungo HOM05D008069 ORTHO05D010454 7.8e-84 314.7 300 59.7
VMungo0464G0009 Vigna mungo HOM05D008069 ORTHO05D010454 4.0e-80 302.4 307 55.7
Phvul.004G167800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.9e-78 296.2 209 74.2
Phvul.004G167200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.3e-72 276.6 305 54.8
VMungo0464G2170 Vigna mungo HOM05D008069 ORTHO05D010454 1.2e-52 211.1 303 40.6
Phvul.004G167500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.7e-52 209.9 237 52.3
Phvul.004G166700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.5e-50 204.1 304 37.8
Phvul.004G164100 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.2e-41 172.2 285 37.5
Phvul.004G167900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.8e-40 170.6 301 37.2
VMungo0464G0022 Vigna mungo HOM05D008069 ORTHO05D010454 2.0e-39 167.2 302 38.1
VMungo0464G1927 Vigna mungo HOM05D008069 ORTHO05D010454 2.6e-39 166.8 270 39.6
Phvul.004G167000 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.2e-38 163.7 179 49.2
Phvul.004G164350 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.4e-37 160.2 278 38.5
Glyma.09G193100 Glycine max HOM05D008069 ORTHO05D010454 3.9e-35 152.9 301 38.2
Glyma.01G145200 Glycine max HOM05D008069 ORTHO05D010454 6.7e-35 152.1 310 34.2
Phvul.004G167700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.9e-34 150.6 168 48.2
VMungo0464G1879 Vigna mungo HOM05D008069 ORTHO05D010454 4.3e-34 149.4 296 36.5
Phvul.004G164200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.1e-33 147.1 276 35.5
VMungo0464G0570 Vigna mungo HOM05D008069 ORTHO05D010454 2.1e-33 147.1 293 35.5
TPR.G34909 Trifolium pratense HOM05D008069 ORTHO05D010454 2.8e-33 146.7 291 34.7
VMungo0464G1478 Vigna mungo HOM05D008069 ORTHO05D010454 8.2e-33 145.2 281 35.6
Phvul.004G164400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.4e-32 144.4 274 35.4
VMungo0464G1789 Vigna mungo HOM05D008069 ORTHO05D010454 1.4e-32 144.4 278 33.8
VMungo0464G1569 Vigna mungo HOM05D008069 ORTHO05D010454 1.2e-31 141.4 181 43.6
Psat1g044800 Pisum sativum HOM05D008069 ORTHO05D010454 4.5e-31 139.4 304 33.9
TPR.G34917 Trifolium pratense HOM05D008069 ORTHO05D010454 1.0e-30 138.3 308 34.1
Phvul.004G166900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 5.5e-29 132.5 289 31.5
Phvul.004G166500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 7.1e-29 132.1 305 31.1
Phvul.004G164300 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 9.3e-29 131.7 154 42.9
Phvul.004G167066 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.1e-28 130.6 116 60.3
Medtr6g488200 Medicago truncatula HOM05D008069 ORTHO05D010454 4.6e-28 129.4 295 32.5
VMungo0464G1239 Vigna mungo HOM05D008069 ORTHO05D010454 7.9e-28 128.6 258 33.7
VMungo0464G0186 Vigna mungo HOM05D008069 ORTHO05D010454 3.0e-27 126.7 254 33.9
Glyma.07G083800 Glycine max HOM05D008069 ORTHO05D010454 4.3e-26 122.9 254 33.9
VMungo0464G0900 Vigna mungo HOM05D008069 ORTHO05D010454 1.8e-24 117.5 148 43.2
VMungo0464G1590 Vigna mungo HOM05D008069 ORTHO05D010454 4.1e-24 116.3 143 44.1
Phvul.004G167301 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.2e-23 114.8 163 44.2
Phvul.004G166650 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.5e-23 112.8 161 41.0
VMungo0464G0330 Vigna mungo HOM05D008069 ORTHO05D010454 4.5e-23 112.8 158 39.9
Psat1g044880 Pisum sativum HOM05D008069 ORTHO05D010454 1.1e-21 108.2 172 39.5
Glyma.12G013900 Glycine max HOM05D008069 ORTHO05D010454 4.2e-21 106.3 181 37.6
TPR.G36572 Trifolium pratense HOM05D008069 ORTHO05D036784 3.6e-20 103.2 279 31.2
Psat1g042560 Pisum sativum HOM05D008069 ORTHO05D010454 6.1e-20 102.4 170 38.8
Medtr6g488190 Medicago truncatula HOM05D008069 ORTHO05D036741 7.9e-20 102.1 218 32.1
Phvul.004G167132 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.7e-19 99.0 135 44.4
VMungo0464G0710 Vigna mungo HOM05D008069 ORTHO05D010454 6.7e-19 99.0 122 41.8
TPR.G901 Trifolium pratense HOM05D008069 ORTHO05D036784 2.2e-17 94.0 254 31.1
Ca_25547_v3 Cicer arietinum L. HOM05D008069 ORTHO05D010454 4.8e-17 92.8 221 30.8
Phvul.004G166600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.9e-16 89.0 117 44.4
Psat1g041680 Pisum sativum HOM05D008069 ORTHO05D010454 1.7e-14 84.3 170 37.6
Medtr6g488240 Medicago truncatula HOM05D008069 ORTHO05D010454 1.1e-13 81.6 143 32.9
Phvul.009G256600 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 1.2e-12 78.2 209 29.2
VMungo0540G0504 Vigna mungo HOM05D002821 ORTHO05D003072 2.7e-12 77.0 48 77.1
Glyma.09G037000 Glycine max HOM05D011871 ORTHO05D016668 3.6e-12 76.6 215 28.8
Lj6g0021720 Lotus japonicus HOM05D008069 ORTHO05D010454 6.1e-12 75.9 126 37.3
Medtr6g488220 Medicago truncatula HOM05D008069 ORTHO05D036784 6.1e-12 75.9 288 27.1
Lj6g0011442 Lotus japonicus HOM05D011871 ORTHO05D016668 7.9e-12 75.5 174 32.8
VMungo1309G1092 Vigna mungo HOM05D011871 ORTHO05D016668 1.8e-11 74.3 231 29.9
Phvul.009G256700 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 5.1e-11 72.8 288 27.4
Medtr6g464520 Medicago truncatula HOM05D008069 ORTHO05D010454 1.5e-10 71.2 72 48.6
Medtr6g488260 Medicago truncatula HOM05D008069 ORTHO05D010454 4.4e-10 69.7 211 25.6
Psat1g041760 Pisum sativum HOM05D008069 ORTHO05D010454 4.4e-10 69.7 181 32.0
Lj6g0008892 Lotus japonicus HOM05D008069 ORTHO05D010454 2.8e-09 67.0 116 33.6
Psat1g158920 Pisum sativum HOM05D011871 ORTHO05D016668 4.1e-08 63.2 192 30.2
Medtr2g034410 Medicago truncatula HOM05D011871 ORTHO05D016668 1.2e-07 61.6 204 26.5


User provided reference genes

Program Settings