Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G166500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.7e-180 635.2 312 100.0
Phvul.004G166600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.6e-92 343.6 303 61.1
Phvul.004G166900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 3.4e-66 256.1 318 51.6
Phvul.004G166650 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 9.5e-61 238.0 172 71.5
VMungo0464G1239 Vigna mungo HOM05D008069 ORTHO05D010454 6.2e-60 235.3 294 52.4
VMungo0464G0186 Vigna mungo HOM05D008069 ORTHO05D010454 3.5e-55 219.5 311 46.9
VMungo0464G0900 Vigna mungo HOM05D008069 ORTHO05D010454 5.1e-54 215.7 301 45.8
VMungo0464G0710 Vigna mungo HOM05D008069 ORTHO05D010454 2.5e-45 186.8 292 43.5
Glyma.01G145200 Glycine max HOM05D008069 ORTHO05D010454 1.2e-44 184.5 325 38.2
VMungo0464G0330 Vigna mungo HOM05D008069 ORTHO05D010454 8.4e-41 171.8 290 40.0
Psat1g044800 Pisum sativum HOM05D008069 ORTHO05D010454 1.6e-31 141.0 312 33.0
Phvul.004G164350 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.6e-31 139.4 306 33.7
Phvul.004G164100 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.9e-29 134.0 290 33.4
TPR.G34917 Trifolium pratense HOM05D008069 ORTHO05D010454 2.5e-29 133.7 310 32.6
Medtr6g488200 Medicago truncatula HOM05D008069 ORTHO05D010454 2.8e-28 130.2 308 33.8
VMungo0464G1879 Vigna mungo HOM05D008069 ORTHO05D010454 8.1e-28 128.6 314 34.7
Phvul.004G166700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.1e-27 128.3 315 30.8
Phvul.004G167000 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.8e-27 127.5 185 44.9
Phvul.004G167400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.8e-27 127.5 305 31.1
Phvul.004G167700 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.0e-27 126.3 158 48.1
TPR.G34909 Trifolium pratense HOM05D008069 ORTHO05D010454 6.9e-27 125.6 328 32.3
VMungo0464G2170 Vigna mungo HOM05D008069 ORTHO05D010454 9.0e-27 125.2 319 31.3
Phvul.004G166800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.5e-26 124.4 317 27.8
Phvul.004G164400 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 4.5e-26 122.9 296 34.5
Phvul.004G164200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.2e-25 120.6 282 32.3
VMungo0464G1569 Vigna mungo HOM05D008069 ORTHO05D010454 6.4e-25 119.0 320 31.2
VMungo0464G1478 Vigna mungo HOM05D008069 ORTHO05D010454 8.4e-25 118.6 319 32.6
VMungo0464G0009 Vigna mungo HOM05D008069 ORTHO05D010454 1.4e-24 117.9 160 45.0
Phvul.004G167900 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 2.4e-24 117.1 285 33.3
VMungo0464G1791 Vigna mungo HOM05D008069 ORTHO05D010454 2.4e-24 117.1 315 30.5
VMungo0464G0570 Vigna mungo HOM05D008069 ORTHO05D010454 5.5e-24 115.9 324 32.4
Phvul.004G164300 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 3.0e-22 110.2 134 45.5
VMungo0464G0022 Vigna mungo HOM05D008069 ORTHO05D010454 3.9e-22 109.8 281 31.0
Glyma.07G083800 Glycine max HOM05D008069 ORTHO05D010454 2.8e-20 103.6 253 30.4
VMungo0464G1789 Vigna mungo HOM05D008069 ORTHO05D010454 2.8e-20 103.6 302 30.5
VMungo0464G1590 Vigna mungo HOM05D008069 ORTHO05D010454 6.2e-20 102.4 149 43.6
Phvul.004G167200 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.8e-19 100.9 303 29.7
Phvul.004G167600 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.2e-18 98.2 260 29.2
Medtr6g488190 Medicago truncatula HOM05D008069 ORTHO05D036741 2.6e-18 97.1 219 28.8
Psat1g042560 Pisum sativum HOM05D008069 ORTHO05D010454 2.2e-17 94.0 160 38.8
Ca_25547_v3 Cicer arietinum L. HOM05D008069 ORTHO05D010454 2.9e-17 93.6 305 25.6
Psat1g044880 Pisum sativum HOM05D008069 ORTHO05D010454 8.4e-17 92.0 154 36.4
Phvul.004G167800 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 7.9e-15 85.5 153 34.6
Glyma.09G193100 Glycine max HOM05D008069 ORTHO05D010454 1.1e-13 81.6 151 33.8
Glyma.09G037000 Glycine max HOM05D011871 ORTHO05D016668 1.5e-13 81.3 234 28.6
Psat1g041680 Pisum sativum HOM05D008069 ORTHO05D010454 4.3e-13 79.7 171 38.0
Glyma.12G013900 Glycine max HOM05D008069 ORTHO05D010454 7.4e-13 79.0 105 42.9
TPR.G36572 Trifolium pratense HOM05D008069 ORTHO05D036784 1.3e-12 78.2 287 28.6
Medtr6g488260 Medicago truncatula HOM05D008069 ORTHO05D010454 1.6e-12 77.8 234 29.9
VMungo0464G1927 Vigna mungo HOM05D008069 ORTHO05D010454 2.8e-12 77.0 78 44.9
Phvul.009G256800 Phaseolus vulgaris HOM05D011871 ORTHO05D010454 3.7e-12 76.6 108 37.0
Phvul.009G256600 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 4.8e-12 76.3 260 27.3
VMungo1309G1092 Vigna mungo HOM05D011871 ORTHO05D016668 8.2e-12 75.5 144 35.4
Phvul.004G167066 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 1.1e-11 75.1 94 40.4
TPR.G901 Trifolium pratense HOM05D008069 ORTHO05D036784 1.4e-11 74.7 166 33.7
Lj6g0011442 Lotus japonicus HOM05D011871 ORTHO05D016668 3.1e-11 73.6 216 28.7
Phvul.004G167500 Phaseolus vulgaris HOM05D008069 ORTHO05D010454 6.9e-11 72.4 211 27.5
Medtr6g464520 Medicago truncatula HOM05D008069 ORTHO05D010454 9.0e-11 72.0 67 52.2
arahy.Tifrunner.gnm1.ann1.QM4YUX Arachis hypogaea HOM05D011871 ORTHO05D016668 5.9e-10 69.3 110 36.4
Lj6g0008892 Lotus japonicus HOM05D008069 ORTHO05D010454 5.9e-10 69.3 157 31.2
Phvul.009G256700 Phaseolus vulgaris HOM05D011871 ORTHO05D016668 5.9e-10 69.3 148 35.1
arahy.Tifrunner.gnm1.ann1.K5L5ZN Arachis hypogaea HOM05D011871 ORTHO05D016668 1.3e-09 68.2 110 35.5
Psat1g041760 Pisum sativum HOM05D008069 ORTHO05D010454 9.3e-08 62.0 92 46.7
Glyma.09G191350 Glycine max HOM05D008069 ORTHO05D010454 4.6e-07 59.7 88 44.3
Psat1g158920 Pisum sativum HOM05D011871 ORTHO05D016668 3.0e-06 57.0 116 34.5
Medtr6g488240 Medicago truncatula HOM05D008069 ORTHO05D010454 6.7e-06 55.8 109 31.2
Medtr2g034410 Medicago truncatula HOM05D011871 ORTHO05D016668 8.7e-06 55.5 257 25.7


User provided reference genes

Program Settings