Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G158700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 6.0e-61 237.3 116 100.0
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 5.1e-44 181.0 105 86.7
Glyma.09G185400 Glycine max HOM05D006108 ORTHO05D007605 2.0e-43 179.1 106 84.0
Glyma.07G090500 Glycine max HOM05D006108 ORTHO05D007605 1.3e-42 176.4 106 82.1
Lj2g0017619 Lotus japonicus HOM05D006108 ORTHO05D007605 4.5e-40 167.9 111 75.7
TPR.G35239 Trifolium pratense HOM05D006108 ORTHO05D007605 1.7e-34 149.4 90 78.9
Psat6g222560 Pisum sativum HOM05D006108 ORTHO05D007605 2.9e-31 138.7 77 81.8
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea HOM05D006108 ORTHO05D007605 1.9e-30 136.0 106 68.9
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea HOM05D006108 ORTHO05D007605 3.2e-30 135.2 108 68.5
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 5.5e-30 134.4 103 61.2
Thecc.03G033400 Theobroma cacao HOM05D006108 ORTHO05D007605 4.7e-29 131.3 104 58.7
Gohir.A09G177600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 8.0e-29 130.6 103 62.1
Gorai.006G195000 Gossypium raimondii HOM05D006108 ORTHO05D007605 8.0e-29 130.6 103 62.1
Nitab4.5_0001599g0060 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.5e-27 126.3 99 60.6
Duzib084G1067 Durio zibethinus HOM05D006108 ORTHO05D007605 2.0e-27 125.9 107 58.9
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 3.3e-27 125.2 100 59.0
PGSC0003DMG402005714 Solanum tuberosum HOM05D006108 ORTHO05D007605 3.3e-27 125.2 104 60.6
Gohir.D09G173100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 5.7e-27 124.4 95 62.1
Manes.05G140027 Manihot esculenta HOM05D006108 ORTHO05D007605 5.7e-27 124.4 74 74.3
Atru.chr9.818 Acer truncatum HOM05D006108 ORTHO05D007605 1.3e-26 123.2 77 71.4
FvH4_5g12320 Fragaria vesca HOM05D006108 ORTHO05D007605 2.2e-26 122.5 113 55.8
Nn3g17803 Nelumbo nucifera HOM05D006108 ORTHO05D007605 2.2e-26 122.5 83 66.3
Nitab4.5_0004412g0100 Nicotiana tabacum HOM05D006108 ORTHO05D007605 2.2e-26 122.5 90 63.3
Ciclev10022919m.g Citrus clementina HOM05D006108 ORTHO05D007605 4.8e-26 121.3 99 60.6
Sopen03g038460 Solanum pennellii HOM05D006108 ORTHO05D007605 4.8e-26 121.3 106 57.5
FAN18G0723 Fragaria x ananassa HOM05D006108 ORTHO05D007605 6.3e-26 120.9 113 54.9
FAN18G1336 Fragaria x ananassa HOM05D006108 ORTHO05D007605 6.3e-26 120.9 113 54.9
FAN13G1808 Fragaria x ananassa HOM05D006108 ORTHO05D007605 8.2e-26 120.6 77 74.0
Prupe.5G220300 Prunus persica HOM05D006108 ORTHO05D007605 1.1e-25 120.2 101 59.4
Gorai.006G061500 Gossypium raimondii HOM05D006108 ORTHO05D007605 1.4e-25 119.8 104 55.8
Gohir.A09G047400 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.8e-25 119.4 104 55.8
RcHm_v2.0_Chr7g0185241 Rosa chinensis HOM05D006108 ORTHO05D007605 2.4e-25 119.0 112 57.1
Gohir.D09G048600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.1e-25 118.6 103 56.3
Dinv09807 Davidia involucrata HOM05D006108 ORTHO05D007605 4.1e-25 118.2 77 71.4
FAN08G0393 Fragaria x ananassa HOM05D006108 ORTHO05D007605 5.3e-25 117.9 81 69.1
Eucgr.B00718 Eucalyptus grandis HOM05D006108 ORTHO05D007605 9.1e-25 117.1 81 61.7
MD14G1225800 Malus domestica HOM05D006108 ORTHO05D007605 9.1e-25 117.1 108 59.3
MD06G1214900 Malus domestica HOM05D006108 ORTHO05D007605 1.2e-24 116.7 108 59.3
MD13G1043700 Malus domestica HOM05D006108 ORTHO05D007605 1.6e-24 116.3 88 58.0
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 1.6e-24 116.3 86 61.6
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 2.6e-24 115.5 85 58.8
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 5.9e-24 114.4 105 56.2
Nn4g23806 Nelumbo nucifera HOM05D006108 ORTHO05D007605 5.9e-24 114.4 81 63.0
Ciclev10033455m.g Citrus clementina HOM05D006108 ORTHO05D007605 7.7e-24 114.0 80 66.2
Prupe.1G308800 Prunus persica HOM05D006108 ORTHO05D007605 7.7e-24 114.0 85 60.0
Rhsim12G0143800 Rhododendron simsii HOM05D006108 ORTHO05D007605 7.7e-24 114.0 86 62.8
TWI79G0681 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 1.0e-23 113.6 92 57.6
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.3e-23 113.2 87 59.8
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 1.7e-23 112.8 84 63.1
PSO017G5628 Papaver somniferum HOM05D006108 ORTHO05D007605 1.7e-23 112.8 78 66.7
CiPaw.15G129300 Carya illinoinensis HOM05D006108 ORTHO05D007605 2.2e-23 112.5 70 74.3
CsaV3_1G006560 Cucumis sativus L. HOM05D006108 ORTHO05D007605 2.2e-23 112.5 99 58.6
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 8.5e-23 110.5 102 53.9
TWI31G1391 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 8.5e-23 110.5 82 61.0
CiPaw.15G083500 Carya illinoinensis HOM05D006108 ORTHO05D007605 3.2e-22 108.6 75 62.7
HanXRQChr02g0058721 Helianthus annuus HOM05D006108 ORTHO05D007605 3.2e-22 108.6 89 56.2
QL10p025064 Quercus lobata HOM05D006108 ORTHO05D007605 3.2e-22 108.6 87 63.2
Sabra08G0090500 Salix brachista HOM05D006108 ORTHO05D007605 1.2e-21 106.7 79 62.0
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 2.1e-21 105.9 82 57.3
Lsat_1_v5_gn_8_39200 Lactuca sativa HOM05D006108 ORTHO05D007605 2.7e-21 105.5 89 53.9
Medtr5g055190 Medicago truncatula HOM05D006108 ORTHO05D007605 2.7e-21 105.5 83 57.8
Gorai.008G184200 Gossypium raimondii HOM05D006108 ORTHO05D007605 3.6e-21 105.1 79 59.5
CSS0049683 Camellia sinensis var. sinensis HOM05D006108 ORTHO05D007605 4.7e-21 104.8 75 62.7
Lj2g0013090 Lotus japonicus HOM05D006108 ORTHO05D007605 4.7e-21 104.8 88 53.4
CDE05G0497 Ceratophyllum demersum HOM05D006108 ORTHO05D007605 6.1e-21 104.4 77 59.7
Manes.14G100500 Manihot esculenta HOM05D006108 ORTHO05D007605 1.0e-20 103.6 82 53.7
Potri.008G119200 Populus trichocarpa HOM05D006108 ORTHO05D007605 1.0e-20 103.6 79 58.2
FAN12G0874 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.8e-20 102.8 109 49.5
TPR.G38355 Trifolium pratense HOM05D006108 ORTHO05D007605 2.3e-20 102.4 84 54.8
Gohir.A12G168100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.0e-20 102.1 78 59.0
MD16G1044500 Malus domestica HOM05D006108 ORTHO05D007605 3.0e-20 102.1 81 56.8
Sed0021850 Sechium edule HOM05D006108 ORTHO05D007605 3.0e-20 102.1 104 53.8
Psat2g097920 Pisum sativum HOM05D006108 ORTHO05D007605 5.2e-20 101.3 80 60.0
Sc14g0007540 Simmondsia chinensis HOM05D006108 ORTHO05D007605 8.8e-20 100.5 86 53.5
Gohir.D12G171700 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.5e-19 99.8 78 57.7
Phvul.003G034700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 1.5e-19 99.8 82 57.3
Oeu008040.1 Olea europaea HOM05D006108 ORTHO05D007605 2.0e-19 99.4 71 63.4
Glyma.01G082600 Glycine max HOM05D006108 ORTHO05D007605 2.6e-19 99.0 82 56.1
Oeu041896.1 Olea europaea HOM05D006108 ORTHO05D007605 2.6e-19 99.0 71 64.8
DCAR_026728 Daucus carota HOM05D006108 ORTHO05D007605 3.4e-19 98.6 80 56.2
Lalb_Chr10g0099931 Lupinus albus HOM05D006108 ORTHO05D007605 3.4e-19 98.6 79 54.4
Eucgr.B03028 Eucalyptus grandis HOM05D006108 ORTHO05D007605 4.4e-19 98.2 109 45.0
Cc11_g10300 Coffea canephora HOM05D006108 ORTHO05D007605 7.5e-19 97.4 83 54.2
Peaxi162Scf00015g00844 Petunia axillaris HOM05D006108 ORTHO05D007605 7.5e-19 97.4 81 58.0
Sp2g15090 Schrenkiella parvula HOM05D006108 ORTHO05D007605 7.5e-19 97.4 78 48.7
Manes.06G070100 Manihot esculenta HOM05D006108 ORTHO05D007605 9.7e-19 97.1 72 54.2
AL5G14490 Arabidopsis lyrata HOM05D006108 ORTHO05D007605 1.3e-18 96.7 79 49.4
Migut.L01077 Erythranthe guttata HOM05D006108 ORTHO05D007605 1.3e-18 96.7 79 58.2
A06p42440 Brassica napus HOM05D006108 ORTHO05D007605 1.7e-18 96.3 75 50.7
BraA06t27159Z Brassica rapa HOM05D006108 ORTHO05D007605 1.7e-18 96.3 75 50.7
CARHR146800 Cardamine hirsuta HOM05D006108 ORTHO05D007605 1.7e-18 96.3 76 52.6
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 1.7e-18 96.3 76 52.6
BcaC06g33947 Brassica carinata HOM05D006108 ORTHO05D007605 2.2e-18 95.9 75 50.7
Carub.0005s0368 Capsella rubella HOM05D006108 ORTHO05D007605 2.2e-18 95.9 81 50.6
Sed0000256 Sechium edule HOM05D006108 ORTHO05D007605 2.2e-18 95.9 74 52.7
Zm00001eb099300 Zea mays HOM05D006108 ORTHO05D007605 3.7e-18 95.1 79 57.0
AT3G25855 Arabidopsis thaliana HOM05D006108 ORTHO05D007605 6.3e-18 94.4 78 48.7
BolC7t44019H Brassica oleracea HOM05D006108 ORTHO05D007605 6.3e-18 94.4 75 50.7
BcaB07g30252 Brassica carinata HOM05D006108 ORTHO05D007605 8.3e-18 94.0 87 47.1
Thhalv10005176m.g Eutrema salsugineum HOM05D006108 ORTHO05D007605 8.3e-18 94.0 73 53.4
C07p34870 Brassica napus HOM05D006108 ORTHO05D007605 1.1e-17 93.6 75 49.3
Os09g0408550 Oryza sativa ssp. japonica HOM05D006108 ORTHO05D007605 1.1e-17 93.6 68 60.3
HPP92_026959 Vanilla planifolia HOM05D006108 ORTHO05D007605 1.4e-17 93.2 72 56.9
BcaC03g17291 Brassica carinata HOM05D006108 ORTHO05D007605 1.8e-17 92.8 101 42.6
BolC2t11319H Brassica oleracea HOM05D006108 ORTHO05D007605 1.8e-17 92.8 101 42.6
QL01p043861 Quercus lobata HOM05D006108 ORTHO05D007605 1.8e-17 92.8 76 55.3
THA.LOC104824033 Tarenaya hassleriana HOM05D006108 ORTHO05D007605 1.8e-17 92.8 68 58.8
BcaC06g31111 Brassica carinata HOM05D006108 ORTHO05D007605 3.1e-17 92.0 77 46.8
A02p34100 Brassica napus HOM05D006108 ORTHO05D007605 4.1e-17 91.7 80 50.0
CsaV3_6G003400 Cucumis sativus L. HOM05D006108 ORTHO05D007605 7.0e-17 90.9 89 42.7
Cpa.g.sc1.185 Carica papaya HOM05D006108 ORTHO05D007605 1.6e-16 89.7 70 55.7
PGR102G2516 Punica granatum HOM05D006108 ORTHO05D007605 2.0e-16 89.4 80 48.8
C02p52370 Brassica napus HOM05D006108 ORTHO05D007605 2.7e-16 89.0 97 42.3
BraA02t08427Z Brassica rapa HOM05D006108 ORTHO05D007605 5.9e-16 87.8 76 50.0
Nitab4.5_0003285g0040 Nicotiana tabacum HOM05D006108 ORTHO05D007605 3.8e-15 85.1 76 53.9
CAN.G388.38 Capsicum annuum HOM05D006108 ORTHO05D007605 1.5e-14 83.2 79 50.6
Sopen05g012490 Solanum pennellii HOM05D006108 ORTHO05D007605 5.5e-14 81.3 82 48.8
Nitab4.5_0001914g0010 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.2e-13 80.1 99 43.4
ECA233G5877 Erigeron canadensis HOM05D006108 ORTHO05D007605 6.1e-13 77.8 70 52.9
ClCG04G011190 Citrullus lanatus HOM05D006108 ORTHO05D007605 2.3e-12 75.9 75 54.7
CAN.G438.131 Capsicum annuum HOM05D006108 ORTHO05D007605 4.0e-12 75.1 74 52.7
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea HOM05D006108 ORTHO05D007605 2.0e-11 72.8 56 58.9
FAN04G0077 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.5e-11 70.9 60 66.7
TWI15G1195 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 3.1e-09 65.5 50 64.0
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 1.2e-08 63.5 58 55.2
Hund05757 Selenicereus undatus HOM05D006108 ORTHO05D007605 5.9e-08 61.2 56 53.6
Sed0027931 Sechium edule HOM05D006108 ORTHO05D007605 1.0e-07 60.5 66 45.5
ClCG08G005220 Citrullus lanatus HOM05D006108 ORTHO05D007605 2.9e-07 58.9 72 41.7
SEGI_37086 Sequoiadendron giganteum HOM05D000262 ORTHO05D000300 1.5e-06 56.6 75 33.3
PGSC0003DMG400010902 Solanum tuberosum HOM05D006108 ORTHO05D007605 1.5e-06 56.6 39 64.1
Psat4g029920 Pisum sativum HOM05D000262 ORTHO05D009865 5.5e-06 54.7 75 38.7


User provided reference genes

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