Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G153600 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 2.1e-71 272.3 147 100.0
VMungo0464G0085 Vigna mungo HOM05D013688 ORTHO05D013355 1.5e-53 213.0 148 80.4
Glyma.07G097400 Glycine max HOM05D003094 ORTHO05D003482 1.6e-42 176.4 125 76.0
Glyma.09G180400 Glycine max HOM05D003094 ORTHO05D003482 1.4e-41 173.3 149 68.5
Lj2g0001179 Lotus japonicus HOM05D003094 ORTHO05D003482 1.5e-27 126.7 164 51.2
Medtr6g082590 Medicago truncatula HOM05D003094 ORTHO05D003482 1.2e-24 117.1 128 57.0
Psat1g035120 Pisum sativum HOM05D003094 ORTHO05D003482 3.1e-22 109.0 168 46.4
Ca_25471_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 9.1e-22 107.5 113 56.6
Ca_29690_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 9.1e-22 107.5 113 56.6
TPR.G25985 Trifolium pratense HOM05D003094 ORTHO05D003482 4.2e-19 98.6 94 63.8
arahy.Tifrunner.gnm1.ann1.53L2ET Arachis hypogaea HOM05D010130 ORTHO05D010480 6.1e-18 94.7 170 42.9
arahy.Tifrunner.gnm1.ann1.J45ZPD Arachis hypogaea HOM05D003094 ORTHO05D003482 1.5e-16 90.1 151 44.4
Cfa019731 Carpinus fangiana HOM05D003094 ORTHO05D003482 4.5e-13 78.6 152 39.5
Haze_18735 Corylus avellana HOM05D003094 ORTHO05D003482 5.9e-13 78.2 154 39.6
TWI81G0976 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 2.9e-12 75.9 121 39.7
Gohir.D07G064100 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.9e-11 73.2 72 56.9
Gorai.001G067600 Gossypium raimondii HOM05D003094 ORTHO05D003482 4.3e-11 72.0 72 55.6
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 9.5e-11 70.9 112 43.8
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 9.5e-11 70.9 132 42.4
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 1.6e-10 70.1 112 43.8
CiPaw.16G089200 Carya illinoinensis HOM05D003094 ORTHO05D003482 2.8e-10 69.3 100 44.0
Gohir.A07G059300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.7e-10 68.6 114 43.0
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 6.1e-10 68.2 112 42.0
QL10p026559 Quercus lobata HOM05D003094 ORTHO05D003482 1.0e-09 67.4 126 40.5
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 1.4e-09 67.0 82 46.3
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.1e-09 65.9 104 42.3
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 5.2e-09 65.1 157 35.7
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.8e-09 64.7 82 47.6
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.8e-09 64.7 82 47.6
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.8e-09 64.7 82 47.6
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 8.9e-09 64.3 100 42.0
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 8.9e-09 64.3 85 43.5
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 8.9e-09 64.3 100 44.0
Atru.chr9.906 Acer truncatum HOM05D003094 ORTHO05D003482 1.2e-08 63.9 129 37.2
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 1.2e-08 63.9 104 43.3
CsaV3_1G006930 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.2e-08 63.9 123 40.7
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.2e-08 63.9 82 47.6
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.2e-08 63.9 82 47.6
Hund02353 Selenicereus undatus HOM05D003094 ORTHO05D003482 1.2e-08 63.9 125 37.6
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 1.5e-08 63.5 134 39.6
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 1.5e-08 63.5 153 31.4
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.5e-08 63.5 83 49.4
Lalb_Chr22g0353211 Lupinus albus HOM05D003094 ORTHO05D003482 1.5e-08 63.5 38 81.6
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 2.0e-08 63.2 132 39.4
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 2.0e-08 63.2 84 44.0
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 2.0e-08 63.2 82 43.9
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.0e-08 63.2 134 36.6
MD06G1220600 Malus domestica HOM05D003094 ORTHO05D003482 2.0e-08 63.2 128 40.6
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 2.0e-08 63.2 124 35.5
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 2.0e-08 63.2 143 34.3
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 2.0e-08 63.2 89 44.9
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 2.6e-08 62.8 79 46.8
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.4e-08 62.4 129 38.8
Gorai.002G151500 Gossypium raimondii HOM05D003094 ORTHO05D003482 4.4e-08 62.0 51 56.9
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 4.4e-08 62.0 145 35.2
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 5.8e-08 61.6 82 42.7
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 5.8e-08 61.6 128 33.6
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 5.8e-08 61.6 100 41.0
Nitab4.5_0001986g0080 Nicotiana tabacum HOM05D003094 ORTHO05D003482 5.8e-08 61.6 121 38.8
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 5.8e-08 61.6 124 35.5
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 7.5e-08 61.2 84 42.9
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 7.5e-08 61.2 130 34.6
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 9.8e-08 60.8 91 46.2
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 9.8e-08 60.8 143 35.7
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 9.8e-08 60.8 82 46.3
Manes.01G015200 Manihot esculenta HOM05D003094 ORTHO05D003482 9.8e-08 60.8 138 36.2
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 9.8e-08 60.8 93 40.9
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 1.3e-07 60.5 98 37.8
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.3e-07 60.5 164 33.5
PGSC0003DMG401005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 1.3e-07 60.5 126 38.1
ClCG04G010900 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.7e-07 60.1 140 35.0
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.7e-07 60.1 98 37.8
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 1.7e-07 60.1 162 33.3
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 2.2e-07 59.7 93 43.0
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 2.2e-07 59.7 84 44.0
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 2.9e-07 59.3 162 30.9
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 2.9e-07 59.3 79 44.3
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 2.9e-07 59.3 90 38.9
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.9e-07 59.3 102 39.2
Lsat_1_v5_gn_8_141460 Lactuca sativa HOM05D003094 ORTHO05D003482 2.9e-07 59.3 91 38.5
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.9e-07 59.3 98 40.8
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.9e-07 59.3 98 40.8
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 2.9e-07 59.3 84 40.5
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 3.7e-07 58.9 99 41.4
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 3.7e-07 58.9 89 43.8
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 3.7e-07 58.9 156 33.3
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 3.7e-07 58.9 156 33.3
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 3.7e-07 58.9 86 45.3
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 4.9e-07 58.5 84 44.0
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 4.9e-07 58.5 102 39.2
Cc04_g06850 Coffea canephora HOM05D003094 ORTHO05D003482 4.9e-07 58.5 141 36.2
MELO3C002109.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.9e-07 58.5 130 37.7
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 4.9e-07 58.5 131 36.6
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 4.9e-07 58.5 133 36.8
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 4.9e-07 58.5 82 41.5
Ah.11g047710 Amaranthus hybridus HOM05D003094 ORTHO05D003482 8.3e-07 57.8 111 37.8
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 8.3e-07 57.8 89 40.4
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 1.1e-06 57.4 174 35.1
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.4e-06 57.0 159 32.7
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.4e-06 57.0 127 33.1
Solyc03g119160.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 1.4e-06 57.0 89 41.6
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 1.4e-06 57.0 100 40.0
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.9e-06 56.6 76 44.7
ECA233G5083 Erigeron canadensis HOM05D003094 ORTHO05D003482 1.9e-06 56.6 120 36.7
Peaxi162Scf00683g00019 Petunia axillaris HOM05D003094 ORTHO05D003482 1.9e-06 56.6 120 32.5
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.4e-06 56.2 85 44.7
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 2.4e-06 56.2 96 39.6
EL10Ac5g11481 Beta vulgaris HOM05D003094 ORTHO05D003482 3.2e-06 55.8 94 35.1
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 3.2e-06 55.8 159 32.7
CAN.G1129.14 Capsicum annuum HOM05D003094 ORTHO05D003482 3.2e-06 55.8 96 38.5
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 3.2e-06 55.8 82 40.2
Gohir.D08G096900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.2e-06 55.8 119 37.8
Gohir.D10G153150 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.1e-06 55.5 71 49.3
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 4.1e-06 55.5 85 41.2
Sopen03g038050 Solanum pennellii HOM05D003094 ORTHO05D003482 4.1e-06 55.5 101 41.6
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 5.4e-06 55.1 133 34.6
COL.COLO4_38537 Corchorus olitorius HOM05D003094 ORTHO05D003482 5.4e-06 55.1 69 43.5
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 5.4e-06 55.1 156 33.3
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 5.4e-06 55.1 100 39.0
Sc10g0009380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 5.4e-06 55.1 131 35.1
HanXRQChr17g0558961 Helianthus annuus HOM05D003094 ORTHO05D003482 7.0e-06 54.7 122 35.2
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 9.2e-06 54.3 89 36.0
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 9.2e-06 54.3 126 34.9
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 9.2e-06 54.3 140 33.6
Gorai.012G098500 Gossypium raimondii HOM05D000575 ORTHO05D003482 9.2e-06 54.3 71 47.9
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 9.2e-06 54.3 85 40.0
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 9.2e-06 54.3 103 36.9


User provided reference genes

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