Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.5e-173 610.9 317 100.0
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.3e-170 601.7 317 98.1
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.2e-158 562.4 320 91.2
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.8e-155 552.7 317 87.4
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.8e-153 545.4 314 89.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.5e-151 538.5 314 87.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.9e-150 535.4 317 89.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 5.0e-150 534.6 314 87.6
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.5e-149 533.1 317 85.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 4.7e-148 528.1 303 87.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 2.9e-142 508.8 360 75.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.8e-142 508.4 316 80.7
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 8.5e-142 507.3 318 80.8
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.5e-141 505.8 318 79.9
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 3.2e-141 505.4 318 79.9
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.2e-140 503.4 318 79.6
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 6.1e-140 501.1 315 78.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 8.0e-140 500.7 317 79.8
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.0e-139 500.4 315 78.7
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.3e-139 499.2 318 77.4
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.0e-139 498.8 318 78.6
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.2e-139 498.0 315 78.4
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 3.4e-138 495.4 316 78.5
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 3.4e-138 495.4 318 79.6
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 5.7e-138 494.6 317 77.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.7e-137 493.0 313 78.3
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 4.9e-137 491.5 313 78.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.0e-135 486.1 317 76.0
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 2.7e-135 485.7 318 77.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.5e-135 485.0 320 76.9
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 4.5e-135 485.0 314 77.1
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 5.9e-135 484.6 317 74.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 5.9e-135 484.6 318 74.5
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.3e-134 483.4 319 74.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 6.6e-134 481.1 324 75.6
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 3.3e-133 478.8 317 79.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.3e-133 478.8 318 75.5
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.2e-131 471.5 316 73.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.6e-130 469.2 316 73.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 5.7e-130 468.0 316 73.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 7.5e-130 467.6 316 72.5
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-129 466.8 316 72.8
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.3e-129 466.8 316 72.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.7e-129 466.5 317 71.9
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.7e-129 466.5 316 73.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.7e-129 466.5 316 72.2
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 1.7e-129 466.5 317 73.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.2e-129 466.1 306 73.9
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 2.9e-129 465.7 318 73.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.9e-129 464.9 306 73.5
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 8.3e-129 464.2 316 71.5
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.4e-128 463.4 317 72.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.4e-128 463.4 315 74.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.4e-128 463.4 316 72.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.8e-128 463.0 303 76.2
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-127 459.5 338 74.0
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.0e-127 459.5 307 73.3
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.7e-127 459.1 322 71.1
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.5e-127 458.8 318 72.6
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.0e-126 455.7 318 72.0
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.6e-126 454.5 316 71.8
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.1e-125 453.8 303 74.9
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.1e-125 453.8 318 71.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 4.3e-125 451.8 325 70.2
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.3e-125 451.8 316 71.8
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.2e-124 450.3 338 68.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.0e-123 445.3 309 71.2
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.2e-122 443.7 311 72.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.2e-121 439.5 318 71.4
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.9e-121 439.1 313 69.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.1e-120 437.2 297 72.7
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.4e-120 436.0 304 71.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 6.6e-118 427.9 320 70.9
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 3.3e-117 425.6 318 67.0
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.3e-117 425.2 317 67.5
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.7e-116 421.8 306 69.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 6.2e-116 421.4 269 79.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 8.1e-116 421.0 318 67.6
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.0e-114 416.4 298 72.8
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 5.8e-114 414.8 317 67.8
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.3e-113 413.7 316 65.2
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.2e-113 412.9 269 80.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.2e-113 412.9 269 80.3
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.0e-107 392.1 289 69.6
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.0e-106 389.8 316 66.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.2e-103 380.6 315 63.5
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.3e-102 377.1 254 75.6
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 8.7e-94 347.8 234 73.9
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.1e-93 347.4 248 69.4
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.8e-92 342.8 323 52.6
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.2e-89 333.2 315 51.4
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 9.3e-88 327.8 181 90.6
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 4.6e-87 325.5 256 68.0
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.9e-83 311.6 314 47.8
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 9.0e-83 311.2 319 52.4
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.4e-82 309.3 207 73.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.9e-82 307.8 314 47.8
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.2e-80 302.8 194 75.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 3.5e-79 299.3 216 69.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 8.4e-73 278.1 332 51.2
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 8.4e-73 278.1 234 62.4
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.2e-71 274.2 268 53.0
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.3e-70 270.0 309 44.0
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 3.0e-62 243.0 341 41.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 3.8e-57 226.1 146 76.7
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 5.2e-46 189.1 144 64.6
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.7e-44 184.1 227 47.6
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.0e-42 177.2 129 66.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-35 154.1 103 76.7
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.2e-31 141.4 247 37.7
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.9e-25 120.2 93 63.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.2e-24 116.3 88 63.6
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 9.5e-24 115.2 211 38.4
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.3e-22 110.5 70 80.0
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.6e-10 69.7 72 47.2
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 7.3e-08 62.4 44 61.4
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 2.3e-06 57.4 43 62.8
Lj5g0003691 Lotus japonicus HOM05D006919 ORTHO05D236465 4.0e-06 56.6 36 83.3
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 8.9e-06 55.5 46 63.0


User provided reference genes

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