Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 8.1e-106 387.1 198 100.0
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 3.7e-95 351.7 198 86.9
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 1.6e-93 346.3 198 86.4
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 4.2e-86 321.6 198 76.3
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 3.9e-84 315.1 198 76.8
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 3.3e-83 312.0 198 75.3
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 4.3e-83 311.6 198 74.7
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 1.3e-82 310.1 198 75.8
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-81 307.0 198 74.2
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 3.1e-81 305.4 198 72.7
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 4.0e-81 305.1 198 74.7
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 4.0e-81 305.1 196 75.0
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.2e-80 303.5 196 74.5
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.5e-80 303.1 198 69.2
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 3.4e-80 302.0 198 71.7
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 5.8e-80 301.2 198 73.2
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 7.6e-80 300.8 198 71.2
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 9.9e-80 300.4 198 72.7
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 1.7e-79 299.7 197 69.0
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.2e-79 299.3 198 72.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 2.2e-79 299.3 197 71.6
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 3.8e-79 298.5 196 73.5
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 4.9e-79 298.1 198 70.7
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 4.9e-79 298.1 198 72.2
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 4.9e-79 298.1 197 71.6
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 1.4e-78 296.6 198 70.7
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 4.2e-78 295.0 198 70.7
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 4.2e-78 295.0 197 68.5
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 9.3e-78 293.9 198 68.2
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.2e-77 293.5 198 68.7
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.2e-77 293.5 198 73.7
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.1e-77 292.7 197 68.5
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 2.1e-77 292.7 198 70.2
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 68.2
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.5e-77 292.0 198 72.2
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 3.5e-77 292.0 198 68.2
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 3.5e-77 292.0 198 67.2
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 4.6e-77 291.6 197 68.0
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 70.2
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 7.9e-77 290.8 195 68.2
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 7.9e-77 290.8 197 69.0
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 69.2
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 69.2
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.3e-76 290.0 197 66.0
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.3e-76 290.0 198 69.2
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 1.7e-76 289.7 198 69.7
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 1.7e-76 289.7 198 68.2
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 1.7e-76 289.7 198 69.2
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.7e-76 289.7 197 72.1
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.3e-76 289.3 198 70.7
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.3e-76 289.3 198 67.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 2.3e-76 289.3 198 66.7
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 3.0e-76 288.9 197 69.5
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 71.2
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 3.9e-76 288.5 198 68.2
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 68.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.5e-75 286.6 198 69.2
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.9e-75 286.2 197 69.5
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.3e-75 285.4 191 72.8
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 3.3e-75 285.4 196 69.4
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 68.2
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 7.3e-75 284.3 197 67.0
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 2.1e-74 282.7 198 66.2
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.6e-74 282.0 183 73.2
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 6.2e-74 281.2 196 67.9
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 8.1e-74 280.8 189 70.4
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 8.1e-74 280.8 196 67.9
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 1.1e-73 280.4 196 65.3
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.1e-73 280.4 197 68.0
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.4e-73 280.0 198 67.2
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.4e-73 279.3 198 65.7
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 2.4e-73 279.3 196 64.8
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 3.1e-73 278.9 187 70.6
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 4.0e-73 278.5 197 67.5
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 9.0e-73 277.3 198 66.2
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.2e-72 276.9 198 66.7
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.5e-72 276.6 199 67.8
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 2.6e-72 275.8 198 67.2
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.4e-72 275.4 192 69.3
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 3.4e-72 275.4 198 66.7
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 4.5e-72 275.0 197 65.5
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 4.5e-72 275.0 183 66.7
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 5.8e-72 274.6 198 64.1
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 7.6e-72 274.2 186 68.8
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.3e-71 273.5 197 65.0
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.7e-71 273.1 184 66.8
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 3.8e-71 271.9 198 65.2
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 4.9e-71 271.6 197 64.5
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 8.4e-71 270.8 198 64.1
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 8.4e-71 270.8 183 67.8
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.1e-70 270.4 198 65.2
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-70 270.4 184 66.3
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.1e-70 270.4 184 66.3
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.9e-70 269.6 199 65.8
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 2.4e-70 269.2 186 68.3
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 3.2e-70 268.9 196 68.4
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 5.5e-70 268.1 198 64.1
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 9.3e-70 267.3 199 64.8
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.2e-69 266.9 198 66.2
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 1.6e-69 266.5 198 64.6
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 1.6e-69 266.5 198 63.1
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 2.7e-69 265.8 198 63.1
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 2.7e-69 265.8 198 63.1
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 3.5e-69 265.4 197 63.5
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 3.5e-69 265.4 196 64.3
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 4.6e-69 265.0 198 65.7
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 7.9e-69 264.2 196 62.8
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.3e-68 262.7 191 66.5
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 6.7e-68 261.2 186 66.1
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 5.6e-67 258.1 197 60.9
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 1.6e-66 256.5 183 67.2
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 2.1e-66 256.1 196 61.2
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.4e-65 253.4 198 57.6
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.2e-64 250.4 198 58.1
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 4.5e-64 248.4 198 59.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 1.1e-62 243.8 178 64.0
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 1.6e-61 240.0 194 57.2
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 4.8e-58 228.4 196 58.2
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 8.2e-58 227.6 183 58.5
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 7.6e-56 221.1 170 63.5
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 4.2e-54 215.3 144 64.6
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 4.2e-54 215.3 144 67.4
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 4.2e-54 215.3 187 56.7
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.5e-54 214.9 143 68.5
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 2.1e-53 213.0 198 60.1
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 4.6e-53 211.8 144 64.6
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 7.9e-53 211.1 155 63.9
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.0e-52 209.1 197 51.3
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 5.7e-51 204.9 156 59.0
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.3e-50 203.8 169 57.4
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 1.4e-49 200.3 194 51.0
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 2.6e-48 196.1 198 49.0
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 3.2e-46 189.1 114 70.2
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 7.9e-45 184.5 198 50.5
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 4.1e-41 172.2 98 74.5
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.7e-37 159.5 126 61.9
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 2.2e-34 149.8 182 43.4
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.4e-33 147.1 181 42.5
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 2.0e-32 143.3 183 45.9
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 2.4e-25 119.8 182 38.5
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 1.6e-24 117.1 73 67.1
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.2e-22 109.4 68 72.1
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 2.1e-21 106.7 144 41.7
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 1.2e-19 100.9 106 49.1
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 2.8e-18 96.3 192 37.0
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 5.4e-17 92.0 124 42.7
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 9.1e-17 91.3 63 65.1
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 4.5e-16 89.0 70 51.4
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.9e-15 86.3 123 41.5
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 9.4e-14 81.3 58 67.2
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 1.1e-06 57.8 43 62.8


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