Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G140300 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 5.7e-83 310.8 153 100.0
Phvul.007G239900 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 2.9e-63 245.4 177 71.2
VMungo0720G1859 Vigna mungo HOM05D001119 ORTHO05D000862 2.3e-52 209.1 178 61.2
Glyma.02G161566 Glycine max HOM05D001119 ORTHO05D000862 1.2e-45 186.8 178 55.6
Glyma.02G156500 Glycine max HOM05D001119 ORTHO05D000862 1.6e-37 159.8 177 51.4
arahy.Tifrunner.gnm1.ann1.E6EV8K Arachis hypogaea HOM05D001119 ORTHO05D000862 1.9e-22 109.8 151 41.1
arahy.Tifrunner.gnm1.ann1.3R87N1 Arachis hypogaea HOM05D001119 ORTHO05D000862 2.5e-22 109.4 151 40.4
Lalb_Chr19g0129081 Lupinus albus HOM05D001119 ORTHO05D000862 1.6e-21 106.7 165 38.2
Lalb_Chr03g0036451 Lupinus albus HOM05D001119 ORTHO05D000862 2.3e-20 102.8 167 34.7
Psat0s1161g0040 Pisum sativum HOM05D001119 ORTHO05D000862 4.9e-18 95.1 161 33.5
Medtr1g008090 Medicago truncatula HOM05D001119 ORTHO05D000862 1.4e-17 93.6 169 33.7
Lj1g0024903 Lotus japonicus HOM05D001119 ORTHO05D000862 5.4e-17 91.7 167 34.1
Lj4g0017342 Lotus japonicus HOM05D001119 ORTHO05D000862 1.2e-16 90.5 178 32.6
Ca_27106_v3 Cicer arietinum L. HOM05D001119 ORTHO05D000862 3.0e-15 85.9 161 31.7
Sabra10G0167500 Salix brachista HOM05D001119 ORTHO05D000862 3.3e-14 82.4 156 35.3
Haze_16943 Corylus avellana HOM05D001119 ORTHO05D000862 5.6e-14 81.6 149 33.6
Potri.008G045000 Populus trichocarpa HOM05D001119 ORTHO05D000862 5.6e-14 81.6 149 33.6
Lj2g0016450 Lotus japonicus HOM05D001119 ORTHO05D000862 2.1e-13 79.7 97 41.2
Cfa001587 Carpinus fangiana HOM05D001119 ORTHO05D000862 2.8e-13 79.3 149 33.6
QL08p056978 Quercus lobata HOM05D001119 ORTHO05D000862 4.7e-13 78.6 148 33.1
Sabra08G0031200 Salix brachista HOM05D001119 ORTHO05D000862 4.7e-13 78.6 178 29.8
Medtr1g048380 Medicago truncatula HOM05D001119 ORTHO05D000862 6.2e-13 78.2 119 35.3
Medtr7g032860 Medicago truncatula HOM05D001119 ORTHO05D000862 8.1e-13 77.8 169 28.4
Lj3g0021803 Lotus japonicus HOM05D001119 ORTHO05D000862 1.1e-12 77.4 168 31.0
Medtr1g102760 Medicago truncatula HOM05D001119 ORTHO05D000862 1.2e-11 73.9 105 36.2
CiPaw.01G277000 Carya illinoinensis HOM05D001119 ORTHO05D000862 3.4e-11 72.4 101 42.6
Cc09_g02590 Coffea canephora HOM05D001119 ORTHO05D000862 1.3e-10 70.5 147 27.2
TPR.G35690 Trifolium pratense HOM05D001119 ORTHO05D000862 1.3e-10 70.5 157 30.6
CsaV3_5G026010 Cucumis sativus L. HOM05D001119 ORTHO05D000862 2.2e-10 69.7 144 29.2
Manes.10G041300 Manihot esculenta HOM05D001119 ORTHO05D000862 4.9e-10 68.6 157 30.6
MELO3C025499.2 Cucumis melo HOM05D001119 ORTHO05D000862 6.4e-10 68.2 140 30.7
Potri.010G216400 Populus trichocarpa HOM05D001119 ORTHO05D000862 6.4e-10 68.2 95 35.8
Medtr1g046710 Medicago truncatula HOM05D001119 ORTHO05D000862 8.4e-10 67.8 98 35.7
Oeu017236.1 Olea europaea HOM05D001119 ORTHO05D000862 8.4e-10 67.8 95 32.6
Lj3g0002278 Lotus japonicus HOM05D001119 ORTHO05D000862 1.1e-09 67.4 158 31.0
Gohir.D13G022000 Gossypium hirsutum HOM05D001119 ORTHO05D000862 1.4e-09 67.0 150 28.0
Rhsim05G0007600 Rhododendron simsii HOM05D001119 ORTHO05D000862 1.4e-09 67.0 145 31.7
Ciclev10033619m.g Citrus clementina HOM05D001119 ORTHO05D000862 2.4e-09 66.2 149 32.9
Hma1.2p1_0179F.1_g079540 Hydrangea macrophylla HOM05D001119 ORTHO05D000862 2.4e-09 66.2 87 39.1
Rhsim03G0122400 Rhododendron simsii HOM05D001119 ORTHO05D000862 2.4e-09 66.2 98 33.7
TAR633G1771 Trochodendron aralioides HOM05D001119 ORTHO05D000862 2.4e-09 66.2 88 37.5
Cpa.g.sc1.267 Carica papaya HOM05D001119 ORTHO05D000862 4.1e-09 65.5 152 27.6
Prupe.2G219300 Prunus persica HOM05D001119 ORTHO05D000862 4.1e-09 65.5 142 28.9
CSS0035501 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 7.1e-09 64.7 139 29.5
TAR633G2176 Trochodendron aralioides HOM05D001119 ORTHO05D000862 7.1e-09 64.7 88 36.4
Gorai.013G024800 Gossypium raimondii HOM05D001119 ORTHO05D000862 9.2e-09 64.3 80 36.2
Sed0006454 Sechium edule HOM05D001119 ORTHO05D000862 9.2e-09 64.3 151 27.2
PGSC0003DMG400010569 Solanum tuberosum HOM05D001119 ORTHO05D000862 1.6e-08 63.5 154 31.2
ClCG09G020410 Citrullus lanatus HOM05D001119 ORTHO05D000862 2.1e-08 63.2 145 26.2
Thecc.10G066900 Theobroma cacao HOM05D001119 ORTHO05D000862 3.5e-08 62.4 92 35.9
CSS0011228 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 4.6e-08 62.0 89 34.8
FAN10G2964 Fragaria x ananassa HOM05D001119 ORTHO05D000862 4.6e-08 62.0 151 28.5
PGR142G2693 Punica granatum HOM05D001119 ORTHO05D000862 4.6e-08 62.0 113 30.1
Sopen04g020180 Solanum pennellii HOM05D001119 ORTHO05D000862 4.6e-08 62.0 154 29.9
Solyc04g049860.2 Solanum lycopersicum HOM05D001119 ORTHO05D000862 6.0e-08 61.6 154 29.2
FAN03G1394 Fragaria x ananassa HOM05D001119 ORTHO05D000862 7.8e-08 61.2 151 28.5
Hma1.2p1_0192F.1_g083540 Hydrangea macrophylla HOM05D001119 ORTHO05D000862 1.0e-07 60.8 97 28.9
Duzib128G1698 Durio zibethinus HOM05D001119 ORTHO05D000862 1.3e-07 60.5 80 37.5
FAN21G3374 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.3e-07 60.5 146 26.0
Manes.16G121000 Manihot esculenta HOM05D001119 ORTHO05D000862 1.3e-07 60.5 89 32.6
Nn2g10643 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.3e-07 60.5 90 32.2
Actinidia38244 Actinidia chinensis HOM05D001119 ORTHO05D000862 2.3e-07 59.7 141 29.1
Nn2g14752 Nelumbo nucifera HOM05D001119 ORTHO05D000862 2.3e-07 59.7 86 37.2
Phvul.003G130800 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 3.0e-07 59.3 90 32.2
Nitab4.5_0003582g0040 Nicotiana tabacum HOM05D001119 ORTHO05D000862 3.9e-07 58.9 95 30.5
FvH4_3g26240 Fragaria vesca HOM05D001119 ORTHO05D000862 5.1e-07 58.5 146 26.0
MD07G1180400 Malus domestica HOM05D001119 ORTHO05D000862 5.1e-07 58.5 91 35.2
Nitab4.5_0000061g0300 Nicotiana tabacum HOM05D001119 ORTHO05D000862 5.1e-07 58.5 95 30.5
RcHm_v2.0_Chr6g0270221 Rosa chinensis HOM05D001119 ORTHO05D000862 5.1e-07 58.5 137 30.7
QL11p000739 Quercus lobata HOM05D001119 ORTHO05D000862 6.6e-07 58.2 88 33.0
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 6.6e-07 58.2 141 29.1
VMungo1215G2745 Vigna mungo HOM05D001119 ORTHO05D000862 6.6e-07 58.2 90 33.3
FvH4_7g20310 Fragaria vesca HOM05D001119 ORTHO05D000862 8.6e-07 57.8 141 29.1
Haze_26011 Corylus avellana HOM05D001119 ORTHO05D000862 1.1e-06 57.4 88 31.8
Migut.F01793 Erythranthe guttata HOM05D001119 ORTHO05D000862 1.5e-06 57.0 96 27.1
RcHm_v2.0_Chr1g0364241 Rosa chinensis HOM05D001119 ORTHO05D000862 1.5e-06 57.0 135 24.4
Atru.chr7.2408 Acer truncatum HOM05D001119 ORTHO05D000862 1.9e-06 56.6 100 33.0
Cfa002990 Carpinus fangiana HOM05D001119 ORTHO05D000862 1.9e-06 56.6 88 30.7
TWI34G1834 Tripterygium wilfordii HOM05D001119 ORTHO05D000862 1.9e-06 56.6 86 32.6
FvH4_7g20311 Fragaria vesca HOM05D001119 ORTHO05D000862 2.5e-06 56.2 151 27.2
FAN06G2550 Fragaria x ananassa HOM05D001119 ORTHO05D000862 2.5e-06 56.2 151 27.2
COL.COLO4_18841 Corchorus olitorius HOM05D001119 ORTHO05D000862 3.3e-06 55.8 91 34.1
Nn2g14751 Nelumbo nucifera HOM05D001119 ORTHO05D000862 3.3e-06 55.8 85 34.1
GSVIVG01016349001 Vitis vinifera HOM05D001119 ORTHO05D000862 3.3e-06 55.8 140 26.4
Atru.chr12.627 Acer truncatum HOM05D001119 ORTHO05D000862 4.3e-06 55.5 142 28.2
Manes.16G095400 Manihot esculenta HOM05D001119 ORTHO05D000862 4.3e-06 55.5 88 31.8
Lj5g0014110 Lotus japonicus HOM05D001119 ORTHO05D000862 5.6e-06 55.1 77 32.5
FAN06G4087 Fragaria x ananassa HOM05D001119 ORTHO05D000862 7.3e-06 54.7 141 28.4
Gohir.A13G021400 Gossypium hirsutum HOM05D001119 ORTHO05D000862 7.3e-06 54.7 136 27.2
CARHR118190 Cardamine hirsuta HOM05D001119 ORTHO05D000862 9.6e-06 54.3 89 30.3
Duzib187G1631 Durio zibethinus HOM05D001119 ORTHO05D000862 9.6e-06 54.3 86 32.6
Glyma.17G049300 Glycine max HOM05D001119 ORTHO05D000862 9.6e-06 54.3 92 31.5
Thecc.09G026700 Theobroma cacao HOM05D001119 ORTHO05D000862 9.6e-06 54.3 91 31.9


User provided reference genes

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