Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 0.0e+00 1419.8 763 100.0
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 7.7e-290 1000.3 746 77.1
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 1.6e-247 859.8 783 65.8
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 1.1e-222 777.3 722 64.4
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 5.7e-192 675.2 701 60.5
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 1.3e-191 674.1 842 51.4
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 4.7e-178 629.0 807 53.3
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 1.9e-171 607.1 810 51.0
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 1.1e-147 528.1 767 48.4
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 2.2e-135 487.3 653 51.1
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 4.0e-129 466.5 699 46.6
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 5.3e-73 280.0 779 35.2
Psat7g226800 Pisum sativum HOM05D012459 ORTHO05D010844 1.8e-60 238.4 585 37.8
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 2.9e-55 221.1 409 40.6
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 1.2e-53 215.7 602 34.1
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 3.3e-30 137.9 854 28.3
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 5.4e-25 120.6 786 29.3
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 2.1e-24 118.6 846 25.9
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 3.3e-22 111.3 724 26.1
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 1.6e-21 109.0 785 28.7
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.6e-21 109.0 817 29.4
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 5.2e-20 104.0 828 25.5
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.5e-19 102.4 980 23.4
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 1.3e-18 99.4 826 25.8
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 4.9e-18 97.4 555 25.9
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 4.2e-17 94.4 826 25.4
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 5.4e-17 94.0 816 23.8
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 2.1e-16 92.0 777 26.8
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 1.5e-14 85.9 146 43.2
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 1.9e-14 85.5 368 32.3
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 2.1e-13 82.0 803 24.0
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 3.6e-13 81.3 207 37.2
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 4.8e-13 80.9 159 39.6
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 4.0e-12 77.8 803 25.2
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 9.0e-12 76.6 848 24.6
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 1.2e-11 76.3 982 22.5
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 1.5e-11 75.9 154 33.8
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 3.4e-11 74.7 170 36.5
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 5.8e-11 73.9 985 23.2
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 1.3e-10 72.8 435 25.1
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 2.2e-10 72.0 153 35.3
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 3.8e-10 71.2 813 26.3
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 4.9e-10 70.9 783 24.9
BcaC04g23353 Brassica carinata HOM05D009813 ORTHO05D011936 1.9e-09 68.9 192 35.9
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 1.9e-09 68.9 443 27.1
A09p08400 Brassica napus HOM05D009813 ORTHO05D011936 9.3e-09 66.6 149 35.6
BraA09t36490Z Brassica rapa HOM05D009813 ORTHO05D011936 9.3e-09 66.6 149 35.6
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 1.2e-08 66.2 152 39.5
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.1e-08 65.5 154 37.7
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 8.7e-07 60.1 414 25.8
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 1.1e-06 59.7 789 26.9
BolC3t18527H Brassica oleracea HOM05D009813 ORTHO05D011936 1.9e-06 58.9 116 37.9
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 2.5e-06 58.5 186 29.6
PGR102G2674 Punica granatum HOM05D012473 ORTHO05D010844 4.3e-06 57.8 149 36.9
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 5.6e-06 57.4 113 34.5
BcaC01g02626 Brassica carinata HOM05D009813 ORTHO05D011936 7.4e-06 57.0 115 38.3
C03p62710 Brassica napus HOM05D009813 ORTHO05D011936 7.4e-06 57.0 115 38.3


User provided reference genes

Program Settings