Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G137000 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 1.2e-54 216.1 94 100.0
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 3.3e-17 91.7 91 42.9
Lalb_Chr18g0052711 Lupinus albus HOM05D005989 ORTHO05D000022 5.7e-17 90.9 90 44.4
TPR.G13740 Trifolium pratense HOM05D005989 ORTHO05D000022 5.7e-17 90.9 92 39.1
RcHm_v2.0_Chr1g0352021 Rosa chinensis HOM05D005989 ORTHO05D000022 2.8e-16 88.6 90 41.1
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 2.8e-16 88.6 90 41.1
RcHm_v2.0_Chr3g0459251 Rosa chinensis HOM05D005989 ORTHO05D000022 6.3e-16 87.4 89 41.6
RcHm_v2.0_Chr4g0395061 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-15 86.7 89 41.6
Glyma.13G358333 Glycine max HOM05D005989 ORTHO05D000022 2.4e-15 85.5 91 38.5
Lalb_Chr21g0306271 Lupinus albus HOM05D005989 ORTHO05D000022 4.1e-15 84.7 90 38.9
TPR.G36653 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-14 83.2 89 40.4
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 3.4e-14 81.6 90 38.9
RcHm_v2.0_Chr7g0184971 Rosa chinensis HOM05D005989 ORTHO05D000022 3.4e-14 81.6 91 37.4
Medtr8g479410 Medicago truncatula HOM05D005989 ORTHO05D000022 5.9e-14 80.9 81 42.0
TPR.G6692 Trifolium pratense HOM05D005989 ORTHO05D000022 1.3e-13 79.7 90 41.1
Lalb_Chr06g0169621 Lupinus albus HOM05D005989 ORTHO05D000022 2.2e-13 79.0 82 39.0
TPR.G18660 Trifolium pratense HOM05D005989 ORTHO05D000022 2.2e-13 79.0 89 38.2
RcHm_v2.0_Chr7g0206171 Rosa chinensis HOM05D005989 ORTHO05D000022 3.8e-13 78.2 91 37.4
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 1.1e-12 76.6 90 34.4
Medtr0070s0030 Medicago truncatula HOM05D015419 ORTHO05D011822 2.5e-12 75.5 82 40.2
Prupe.4G283800 Prunus persica HOM05D005989 ORTHO05D000651 3.2e-12 75.1 74 41.9
Prupe.1G484600 Prunus persica HOM05D005989 ORTHO05D000022 9.4e-12 73.6 81 39.5
Lalb_Chr02g0160271 Lupinus albus HOM05D005989 ORTHO05D000022 1.2e-11 73.2 74 41.9
Psat2g155160 Pisum sativum HOM05D005989 ORTHO05D000022 1.6e-11 72.8 90 35.6
PSO063G2465 Papaver somniferum HOM05D005989 ORTHO05D000022 2.7e-11 72.0 90 35.6
RcHm_v2.0_Chr3g0451531 Rosa chinensis HOM05D005989 ORTHO05D000022 2.7e-11 72.0 92 34.8
Lalb_Chr08g0232201 Lupinus albus HOM05D005989 ORTHO05D000022 1.8e-10 69.3 66 36.4
Psat0s1775g0320 Pisum sativum HOM05D005989 ORTHO05D000022 2.3e-10 68.9 90 35.6
Medtr3g092860 Medicago truncatula HOM05D005989 ORTHO05D000022 3.0e-10 68.6 46 58.7
Medtr7g031765 Medicago truncatula HOM05D009351 ORTHO05D011822 3.0e-10 68.6 90 36.7
PSO541G4268 Papaver somniferum HOM05D005989 ORTHO05D000022 5.1e-10 67.8 90 34.4
PSO832G3439 Papaver somniferum HOM05D005989 ORTHO05D000022 5.1e-10 67.8 90 32.2
RcHm_v2.0_Chr7g0237631 Rosa chinensis HOM05D005989 ORTHO05D000022 6.7e-10 67.4 83 34.9
Lalb_Chr06g0160781 Lupinus albus HOM05D005989 ORTHO05D000022 1.1e-09 66.6 71 38.0
Lalb_Chr07g0188801 Lupinus albus HOM05D005989 ORTHO05D000022 1.1e-09 66.6 90 36.7
Medtr7g059380 Medicago truncatula HOM05D005989 ORTHO05D000022 2.5e-09 65.5 71 36.6
Atru.chr10.504 Acer truncatum HOM05D000003 ORTHO05D000022 4.3e-09 64.7 88 31.8
RcHm_v2.0_Chr2g0120021 Rosa chinensis HOM05D005989 ORTHO05D000022 4.3e-09 64.7 91 30.8
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 4.3e-09 64.7 92 33.7
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-09 63.9 84 39.3
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-09 63.9 84 39.3
RcHm_v2.0_Chr1g0316991 Rosa chinensis HOM05D005989 ORTHO05D000022 7.4e-09 63.9 91 30.8
RcHm_v2.0_Chr1g0357231 Rosa chinensis HOM05D000003 ORTHO05D000004 7.4e-09 63.9 72 38.9
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 7.4e-09 63.9 92 33.7
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 9.7e-09 63.5 91 30.8
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 1.3e-08 63.2 85 34.1
RcHm_v2.0_Chr5g0016091 Rosa chinensis HOM05D005989 ORTHO05D020750 1.3e-08 63.2 90 31.1
FvH4_5g27541 Fragaria vesca HOM05D005989 ORTHO05D000022 1.7e-08 62.8 70 35.7
RcHm_v2.0_Chr4g0393351 Rosa chinensis HOM05D000155 ORTHO05D000022 2.2e-08 62.4 90 31.1
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 2.8e-08 62.0 87 29.9
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 2.8e-08 62.0 92 32.6
FvH4_6g09211 Fragaria vesca HOM05D000003 ORTHO05D000651 3.7e-08 61.6 79 32.9
Atru.chr9.192 Acer truncatum HOM05D005989 ORTHO05D000022 4.8e-08 61.2 87 29.9
Atru.chr5.1911 Acer truncatum HOM05D005989 ORTHO05D000022 6.3e-08 60.8 87 29.9
Medtr2g022360 Medicago truncatula HOM05D005989 ORTHO05D000022 6.3e-08 60.8 56 44.6
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 1.4e-07 59.7 84 32.1
Atru.chr8.558 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-07 59.3 63 36.5
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 1.8e-07 59.3 58 39.7
RcHm_v2.0_Chr2g0133661 Rosa chinensis HOM05D000155 ORTHO05D000022 1.8e-07 59.3 71 35.2
RcHm_v2.0_Chr3g0454631 Rosa chinensis HOM05D002340 ORTHO05D003624 1.8e-07 59.3 71 35.2
Atru.chr2.1816 Acer truncatum HOM05D000003 ORTHO05D000022 2.4e-07 58.9 87 28.7
Medtr1g083630 Medicago truncatula HOM05D000008 ORTHO05D000005 4.1e-07 58.2 53 39.6
Glyma.15G263266 Glycine max HOM05D005989 ORTHO05D000022 5.3e-07 57.8 66 34.8
RcHm_v2.0_Chr3g0472791 Rosa chinensis HOM05D000155 ORTHO05D000022 5.3e-07 57.8 59 42.4
Medtr3g448510 Medicago truncatula HOM05D009351 ORTHO05D011822 6.9e-07 57.4 83 36.1
RcHm_v2.0_Chr7g0222341 Rosa chinensis HOM05D005989 ORTHO05D017036 9.1e-07 57.0 55 45.5
Phvul.010G021300 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 1.5e-06 56.2 69 36.2
Atru.chr3.1839 Acer truncatum HOM05D005989 ORTHO05D000022 2.0e-06 55.8 85 30.6
Psat1g101960 Pisum sativum HOM05D000003 ORTHO05D000007 2.6e-06 55.5 66 31.8
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 3.4e-06 55.1 72 33.3


User provided reference genes

Program Settings