Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 1.2e-87 326.6 181 100.0
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 7.2e-77 290.8 202 84.7
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 9.7e-66 253.8 182 85.2
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 2.1e-60 236.1 181 79.6
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 6.1e-60 234.6 181 80.1
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 3.0e-51 205.7 208 66.3
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.5e-50 203.4 226 58.0
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 3.1e-48 195.7 186 64.5
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 9.1e-48 194.1 183 64.5
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 4.5e-47 191.8 184 64.7
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 7.7e-47 191.0 186 61.8
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 7.7e-47 191.0 184 62.0
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 7.7e-47 191.0 185 63.8
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 1.0e-46 190.7 184 63.0
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 1.7e-46 189.9 184 61.4
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 2.9e-46 189.1 184 63.6
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 3.8e-46 188.7 186 62.4
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 1.1e-45 187.2 184 61.4
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 1.5e-45 186.8 184 62.5
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 2.5e-45 186.0 184 61.4
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.5e-45 186.0 188 61.2
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 2.5e-45 186.0 180 63.9
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 3.3e-45 185.7 185 63.8
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 3.3e-45 185.7 180 61.7
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 7.2e-45 184.5 201 57.2
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 7.2e-45 184.5 185 62.2
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 7.2e-45 184.5 185 60.5
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 9.5e-45 184.1 184 60.9
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 1.2e-44 183.7 180 61.7
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.2e-44 183.7 180 64.4
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 4.7e-44 181.8 186 59.7
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 6.1e-44 181.4 181 62.4
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 6.1e-44 181.4 185 61.6
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 1.4e-43 180.3 184 63.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 1.8e-43 179.9 185 60.5
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 1.8e-43 179.9 196 58.7
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 4.0e-43 178.7 142 73.2
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 5.2e-43 178.3 191 59.2
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 6.8e-43 177.9 181 60.2
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 8.9e-43 177.6 186 58.6
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 1.5e-42 176.8 181 61.9
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 2.6e-42 176.0 200 55.5
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 4.4e-42 175.3 184 59.8
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 7.5e-42 174.5 190 57.4
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 1.7e-41 173.3 183 60.1
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 1.7e-41 173.3 153 68.0
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 2.2e-41 172.9 188 58.0
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 4.9e-41 171.8 194 57.7
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 6.3e-41 171.4 194 56.7
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 6.3e-41 171.4 186 60.8
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 8.3e-41 171.0 191 58.6
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 1.1e-40 170.6 196 56.6
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 1.8e-40 169.9 187 56.1
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 5.4e-40 168.3 182 57.7
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 1.2e-39 167.2 203 55.7
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 2.0e-39 166.4 111 80.2
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 2.7e-39 166.0 97 87.6
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 2.3e-38 162.9 180 57.8
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 5.0e-38 161.8 185 56.2
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.9e-37 159.8 177 59.3
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 3.3e-37 159.1 202 52.0
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.6e-36 156.8 183 55.2
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 2.8e-36 156.0 107 80.4
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 8.0e-36 154.5 108 78.7
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 2.3e-35 152.9 192 51.6
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 8.9e-35 151.0 186 50.5
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.4e-34 148.7 186 51.1
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 5.8e-34 148.3 186 51.1
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 7.5e-34 147.9 184 52.7
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 9.8e-34 147.5 133 63.9
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.9e-33 146.0 135 63.0
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 6.4e-33 144.8 182 52.7
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 2.7e-31 139.4 129 69.8
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 3.5e-31 139.0 135 59.3
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 7.8e-31 137.9 129 62.8
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 5.6e-29 131.7 159 53.5
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 7.3e-29 131.3 185 52.4
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 1.8e-27 126.7 97 67.0
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 8.9e-27 124.4 185 47.6
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 2.0e-26 123.2 144 57.6
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 4.4e-26 122.1 187 46.0
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.5e-26 121.3 133 58.6
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 2.2e-25 119.8 139 58.3
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 1.4e-24 117.1 230 40.9
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 9.2e-24 114.4 120 60.0
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 1.2e-20 104.0 54 96.3
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 2.1e-20 103.2 188 41.5
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 2.1e-20 103.2 52 100.0
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 2.8e-20 102.8 57 93.0
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 4.7e-20 102.1 52 98.1
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 4.7e-20 102.1 52 98.1
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 1.1e-19 100.9 52 96.2
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 1.1e-19 100.9 52 96.2
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 4.0e-19 99.0 52 94.2
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 6.8e-19 98.2 186 39.8
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 2.0e-18 96.7 169 46.2
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 4.4e-18 95.5 133 50.4
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 4.4e-18 95.5 133 50.4
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.9e-17 92.8 134 47.0
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 3.7e-17 92.4 164 46.3
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 9.2e-16 87.8 168 42.3
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 1.2e-15 87.4 128 47.7
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 1.2e-15 87.4 180 39.4
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 1.2e-15 87.4 180 39.4
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 1.2e-12 77.4 172 40.7
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 1.2e-12 77.4 37 100.0
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 4.7e-12 75.5 133 42.1
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 2.4e-11 73.2 44 84.1
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 4.0e-11 72.4 170 34.7
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 1.5e-10 70.5 51 68.6
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 3.4e-10 69.3 36 100.0
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 5.8e-10 68.6 36 97.2
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 1.7e-09 67.0 137 40.9
Lalb_Chr24g0398631 Lupinus albus HOM05D005752 ORTHO05D006959 2.2e-09 66.6 71 56.3
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.1e-08 64.3 42 81.0
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 5.4e-08 62.0 37 89.2
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 1.2e-07 60.8 77 44.2
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 1.2e-07 60.8 35 88.6
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 5.1e-06 55.5 80 46.2


User provided reference genes

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