Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 6.8e-169 597.4 344 100.0
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 3.3e-123 445.7 340 79.7
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 7.9e-101 371.3 334 70.1
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 3.8e-87 325.9 334 55.7
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 1.2e-80 304.3 335 60.9
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 1.6e-77 293.9 328 48.2
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.0e-76 291.2 308 49.7
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.4e-76 290.8 329 47.4
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 4.0e-76 289.3 341 48.1
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 3.3e-62 243.0 331 54.4
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 3.0e-55 219.9 297 46.1
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 3.1e-52 209.9 327 45.9
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 3.0e-47 193.4 336 44.6
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 8.6e-47 191.8 323 42.4
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 4.3e-46 189.5 296 48.6
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 2.6e-43 180.3 313 44.7
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 9.9e-43 178.3 290 37.6
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 8.4e-42 175.3 312 35.9
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 8.4e-42 175.3 297 46.1
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.9e-41 174.1 323 45.5
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 2.4e-41 173.7 297 45.5
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 7.1e-41 172.2 327 45.0
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 9.2e-41 171.8 311 41.8
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 9.2e-41 171.8 323 45.2
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 6.0e-40 169.1 329 33.4
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.0e-39 168.3 335 44.5
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 1.7e-39 167.5 321 43.3
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 3.9e-39 166.4 279 49.1
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 5.1e-39 166.0 289 45.0
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.5e-38 164.5 319 42.6
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.9e-38 164.1 311 41.8
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 7.3e-38 162.2 308 43.5
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 1.2e-37 161.4 313 44.1
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 2.1e-37 160.6 296 47.6
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 2.8e-37 160.2 155 49.7
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 6.8e-36 155.6 307 42.3
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 6.8e-36 155.6 307 42.3
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 1.5e-35 154.5 303 42.6
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 2.6e-35 153.7 286 32.2
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 3.4e-35 153.3 284 43.7
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 3.4e-35 153.3 284 43.7
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 3.4e-35 153.3 315 37.1
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 4.4e-35 152.9 169 47.3
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 5.8e-35 152.5 330 42.1
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 9.9e-35 151.8 327 43.1
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 2.9e-34 150.2 145 51.7
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.9e-34 150.2 323 42.4
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 1.1e-33 148.3 309 43.0
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 7.1e-33 145.6 305 42.0
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 7.1e-33 145.6 324 41.7
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 3.0e-31 140.2 297 41.8
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 1.5e-30 137.9 306 41.2
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 1.5e-30 137.9 314 31.8
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.9e-30 137.5 331 39.6
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 3.3e-30 136.7 297 41.4
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 4.3e-30 136.3 335 38.8
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 4.3e-30 136.3 331 39.3
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 1.6e-29 134.4 335 39.4
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 8.1e-29 132.1 329 38.9
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 1.1e-28 131.7 328 38.7
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 1.2e-27 128.3 309 41.4
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 2.0e-27 127.5 186 56.5
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 1.7e-26 124.4 324 39.2
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.2e-26 124.0 299 39.8
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.1e-25 121.7 298 38.9
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 5.4e-25 119.4 310 40.0
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.6e-24 117.9 323 39.6
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 3.5e-24 116.7 265 44.9
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 6.0e-24 115.9 312 38.1
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 3.9e-23 113.2 325 37.8
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 8.7e-23 112.1 328 38.1
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 2.5e-22 110.5 126 42.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 9.6e-22 108.6 287 40.1
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.3e-21 108.2 289 40.1
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 2.1e-21 107.5 291 40.5
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 8.1e-21 105.5 140 40.7
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 1.4e-20 104.8 296 37.5
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 1.8e-20 104.4 286 39.5
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 1.2e-16 91.7 304 35.9
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 6.0e-16 89.4 292 37.7
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.7e-15 85.5 187 47.1
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 7.4e-14 82.4 278 37.8
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.1e-12 78.6 113 40.7
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 1.9e-09 67.8 170 26.5
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.2e-08 65.1 94 34.0
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.7e-08 63.9 100 35.0
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.7e-08 63.9 132 29.5
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 2.7e-08 63.9 81 42.0
arahy.Tifrunner.gnm1.ann1.AV2QAA Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-07 60.5 64 48.4
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.7e-06 56.2 164 23.8
arahy.Tifrunner.gnm1.ann1.W2YVB2 Arachis hypogaea HOM05D007655 ORTHO05D009698 7.4e-06 55.8 38 60.5


User provided reference genes

Program Settings