Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 3.0e-153 545.0 260 100.0
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 1.6e-141 506.1 260 92.7
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 7.3e-131 470.7 264 85.2
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 3.4e-128 461.8 264 83.7
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 4.3e-123 444.9 259 81.1
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 4.7e-122 441.4 264 79.9
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 4.0e-121 438.3 259 78.8
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.5e-120 436.4 263 77.9
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 2.7e-117 425.6 261 77.8
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 1.7e-103 379.8 239 77.0
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 3.5e-101 372.1 254 69.3
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 1.3e-98 363.6 251 72.5
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 1.1e-97 360.5 262 65.6
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 1.1e-97 360.5 263 65.4
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 1.8e-97 359.8 267 66.3
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 4.6e-93 345.1 268 63.1
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 6.7e-92 341.3 267 62.9
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 1.9e-91 339.7 263 62.0
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 2.1e-90 336.3 263 64.3
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.1e-89 334.0 267 62.9
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 1.8e-89 333.2 267 62.2
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 1.8e-89 333.2 267 62.2
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.4e-89 332.8 257 63.8
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 2.4e-89 332.8 267 61.8
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.2e-88 330.5 267 63.3
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 1.5e-88 330.1 266 60.9
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 2.6e-88 329.3 267 61.8
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 1.7e-87 326.6 264 62.1
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 1.9e-86 323.2 267 60.7
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 1.9e-86 323.2 281 57.7
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 3.2e-86 322.4 268 59.7
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 7.1e-86 321.2 260 61.2
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 1.0e-84 317.4 265 58.9
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.3e-84 317.0 258 61.6
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 3.9e-84 315.5 260 61.5
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.5e-83 313.5 254 60.2
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.9e-83 313.2 254 60.2
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.3e-83 312.4 271 59.0
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 3.3e-83 312.4 271 59.0
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 3.3e-83 312.4 262 59.5
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 5.6e-83 311.6 273 59.3
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 7.4e-83 311.2 260 60.8
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 1.6e-82 310.1 261 59.4
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 2.8e-82 309.3 254 60.2
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 2.8e-82 309.3 221 68.3
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 2.8e-82 309.3 260 60.4
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 8.2e-82 307.8 255 58.4
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 1.4e-81 307.0 259 59.5
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 2.4e-81 306.2 254 61.0
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 4.0e-81 305.4 270 57.4
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 5.3e-81 305.1 267 56.9
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 6.9e-81 304.7 261 59.4
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 9.0e-81 304.3 255 60.0
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 2.6e-80 302.8 255 58.8
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 2.6e-80 302.8 270 57.0
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 5.8e-80 301.6 257 59.5
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 8.4e-79 297.7 266 56.0
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 3.2e-78 295.8 254 59.8
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 2.1e-77 293.1 264 56.4
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.3e-76 290.4 258 55.8
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 3.0e-76 289.3 264 57.2
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 3.9e-76 288.9 272 54.8
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.5e-75 286.2 207 63.8
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.6e-74 283.5 279 53.4
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 3.7e-74 282.3 261 55.2
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 4.8e-74 282.0 277 54.9
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 6.3e-74 281.6 257 55.3
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 8.2e-74 281.2 184 70.7
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.8e-73 280.0 262 55.3
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 4.1e-73 278.9 230 60.4
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 9.0e-73 277.7 212 62.3
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 2.6e-72 276.2 194 70.1
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 4.5e-72 275.4 258 54.7
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 1.3e-71 273.9 270 53.7
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 3.8e-71 272.3 191 68.1
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 4.2e-70 268.9 194 68.0
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.5e-70 268.5 283 50.9
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 2.7e-69 266.2 201 65.2
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 4.6e-69 265.4 303 47.9
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 1.0e-68 264.2 260 52.3
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 8.7e-68 261.2 288 48.6
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 1.1e-65 254.2 257 49.4
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 2.6e-64 249.6 259 48.6
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.7e-63 246.9 153 76.5
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 5.0e-63 245.4 267 50.9
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 3.1e-57 226.1 192 60.9
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.2e-56 224.2 202 59.4
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.2e-56 224.2 199 58.8
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 5.9e-56 221.9 257 47.1
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 3.8e-55 219.2 271 44.6
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 7.2e-54 214.9 267 44.9
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.2e-53 214.2 256 47.3
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.8e-52 210.3 135 69.6
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 3.0e-52 209.5 202 54.5
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.0e-51 206.8 191 57.1
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.3e-50 204.1 284 43.3
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 2.2e-50 203.4 322 40.4
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 2.6e-48 196.4 191 54.5
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.4e-41 173.3 175 53.7
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 1.9e-38 163.7 136 58.8
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 2.0e-35 153.7 267 36.0
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.0e-35 153.7 161 54.0
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 2.0e-35 153.7 164 51.2
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 3.4e-35 152.9 154 53.9
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 9.1e-33 144.8 134 55.2
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 2.7e-32 143.3 167 47.3
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.0e-31 141.4 241 37.3
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-30 136.3 107 56.1
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.1e-22 111.3 173 37.0
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 4.3e-22 109.4 70 68.6
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.4e-20 104.4 70 67.1
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 1.7e-18 97.4 199 34.7
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 5.4e-17 92.4 179 36.3
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 3.9e-15 86.3 177 32.2
Glyma.04G217700 Glycine max HOM05D003201 ORTHO05D211679 1.7e-07 60.8 37 75.7
BcaB04g18148 Brassica carinata HOM05D007105 ORTHO05D009304 3.9e-07 59.7 193 26.9
BcaC07g37753 Brassica carinata HOM05D007105 ORTHO05D009304 3.9e-07 59.7 197 27.9
BolC8t48138H Brassica oleracea HOM05D007105 ORTHO05D009304 3.9e-07 59.7 197 27.9


User provided reference genes

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