Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G131200 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 2.2e-102 375.6 181 100.0
Phvul.004G130200 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.4e-83 313.2 201 77.6
Phvul.004G130700 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 2.6e-71 272.3 201 70.1
Phvul.004G131100 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 3.3e-66 255.4 201 66.7
Phvul.004G131000 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 2.7e-60 235.7 201 61.7
VMungo0464G0624 Vigna mungo HOM05D013217 ORTHO05D000427 1.0e-59 233.8 203 60.1
Phvul.004G130750 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.0e-51 207.2 146 67.8
Phvul.004G130400 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.6e-36 156.8 199 45.7
VMungo0464G1990 Vigna mungo HOM05D000535 ORTHO05D000427 2.6e-34 149.4 201 45.3
Phvul.004G130800 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 9.2e-32 141.0 153 52.3
Phvul.004G130500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 6.6e-30 134.8 203 41.4
Glyma.09G155500 Glycine max HOM05D000535 ORTHO05D000427 2.0e-26 123.2 181 41.4
VMungo0464G1579 Vigna mungo HOM05D000535 ORTHO05D000427 2.4e-24 116.3 183 39.9
Ca_25239_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 5.4e-24 115.2 189 40.2
Medtr6g059650 Medicago truncatula HOM05D000535 ORTHO05D000427 5.4e-24 115.2 195 38.5
Phvul.004G129600 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 9.2e-24 114.4 184 40.8
Lalb_Chr01g0008701 Lupinus albus HOM05D000535 ORTHO05D000427 1.0e-22 110.9 197 39.1
arahy.Tifrunner.gnm1.ann1.9N9F55 Arachis hypogaea HOM05D000535 ORTHO05D000427 1.3e-22 110.5 180 38.9
Phvul.004G130600 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.3e-22 110.5 196 37.8
Psat1g112600 Pisum sativum HOM05D000535 ORTHO05D000427 5.1e-22 108.6 195 37.4
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 8.6e-22 107.8 161 39.8
Phvul.004G129500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.1e-21 107.5 198 39.4
Psat1g112520 Pisum sativum HOM05D000535 ORTHO05D000427 1.1e-21 107.5 188 38.3
Medtr6g059730 Medicago truncatula HOM05D000535 ORTHO05D000427 1.5e-21 107.1 193 36.8
Lj2g0009599 Lotus japonicus HOM05D000535 ORTHO05D000427 1.9e-21 106.7 196 37.8
Medtr6g059680 Medicago truncatula HOM05D000535 ORTHO05D000427 1.9e-21 106.7 197 37.1
arahy.Tifrunner.gnm1.ann1.U2UX9Q Arachis hypogaea HOM05D000535 ORTHO05D000427 2.5e-21 106.3 180 38.3
Phvul.004G129900 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.1e-20 103.2 207 37.2
TPR.G5828 Trifolium pratense HOM05D000535 ORTHO05D000427 3.6e-20 102.4 196 37.8
Medtr3g463590 Medicago truncatula HOM05D000535 ORTHO05D000427 6.2e-20 101.7 205 39.0
Medtr6g065460 Medicago truncatula HOM05D000535 ORTHO05D000427 1.1e-19 100.9 196 35.2
Phvul.004G129800 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.1e-19 100.9 187 39.0
Psat0s4676g0040 Pisum sativum HOM05D000535 ORTHO05D000427 1.4e-19 100.5 197 34.5
Lj5g0017298 Lotus japonicus HOM05D000535 ORTHO05D000427 2.3e-19 99.8 201 36.3
Psat0s2953g0120 Pisum sativum HOM05D000535 ORTHO05D000427 1.5e-18 97.1 196 37.8
Medtr6g059410 Medicago truncatula HOM05D000535 ORTHO05D000427 7.5e-18 94.7 189 34.4
Medtr6g017225 Medicago truncatula HOM05D000535 ORTHO05D000427 2.2e-17 93.2 205 32.7
VMungo0464G1848 Vigna mungo HOM05D013217 ORTHO05D000427 3.7e-17 92.4 148 35.8
Psat0s2953g0040 Pisum sativum HOM05D000535 ORTHO05D000427 6.4e-17 91.7 216 35.2
Ca_26737_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 1.2e-15 87.4 169 35.5
Medtr6g059530 Medicago truncatula HOM05D000535 ORTHO05D000427 2.1e-15 86.7 189 33.3
TPR.G5811 Trifolium pratense HOM05D000535 ORTHO05D000427 3.0e-14 82.8 186 33.3
Psat0s2953g0160 Pisum sativum HOM05D000535 ORTHO05D000427 3.9e-14 82.4 149 36.2
arahy.Tifrunner.gnm1.ann1.L4PC56 Arachis hypogaea HOM05D013217 ORTHO05D000427 6.6e-14 81.6 97 42.3
Medtr6g009650 Medicago truncatula HOM05D000535 ORTHO05D000427 6.6e-14 81.6 165 35.8
Medtr6g009563 Medicago truncatula HOM05D000535 ORTHO05D000427 1.9e-13 80.1 175 34.9
Medtr1g035770 Medicago truncatula HOM05D000535 ORTHO05D000427 5.6e-13 78.6 185 33.5
Medtr6g059760 Medicago truncatula HOM05D000535 ORTHO05D000427 7.3e-13 78.2 196 32.1
TPR.G8844 Trifolium pratense HOM05D000535 ORTHO05D000427 7.3e-13 78.2 188 34.0
Medtr6g066190 Medicago truncatula HOM05D000535 ORTHO05D000427 2.8e-12 76.3 172 34.3
VMungo0464G2067 Vigna mungo HOM05D000535 ORTHO05D000427 3.4e-10 69.3 156 31.4
TWI12G0051 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 4.4e-10 68.9 146 28.8
TPR.G5846 Trifolium pratense HOM05D000535 ORTHO05D000427 2.2e-09 66.6 139 30.2
TWI15G0556 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 4.9e-09 65.5 146 28.1
arahy.Tifrunner.gnm1.ann1.91JQUG Arachis hypogaea HOM05D000535 ORTHO05D000427 8.4e-09 64.7 103 39.8
Migut.O00272 Erythranthe guttata HOM05D000535 ORTHO05D000427 1.1e-08 64.3 151 29.8
Medtr6g045433 Medicago truncatula HOM05D000535 ORTHO05D000427 1.1e-08 64.3 148 30.4
Medtr6g045403 Medicago truncatula HOM05D000535 ORTHO05D000427 1.4e-08 63.9 205 27.3
VMungo0464G0329 Vigna mungo HOM05D000535 ORTHO05D000427 1.2e-07 60.8 192 28.6
MSTRG.11531 Avicennia marina HOM05D000535 ORTHO05D000427 1.6e-07 60.5 143 29.4
CiPaw.16G075200 Carya illinoinensis HOM05D000535 ORTHO05D000427 1.6e-07 60.5 145 26.9
arahy.Tifrunner.gnm1.ann1.K2SWWG Arachis hypogaea HOM05D000535 ORTHO05D000427 7.8e-07 58.2 151 29.1
DCAR_011686 Daucus carota HOM05D000535 ORTHO05D000427 1.3e-06 57.4 199 25.6
Solyc06g072210.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 2.3e-06 56.6 133 33.1
Sopen06g028530 Solanum pennellii HOM05D000535 ORTHO05D000427 6.6e-06 55.1 133 31.6


User provided reference genes

Program Settings