Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G130200 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.2e-120 436.4 209 100.0
Phvul.004G130700 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 4.7e-96 354.8 209 83.3
Phvul.004G131100 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 4.7e-88 328.2 209 77.5
Phvul.004G131000 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 9.1e-84 313.9 209 74.6
Phvul.004G131200 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.2e-83 313.5 201 77.6
VMungo0464G0624 Vigna mungo HOM05D013217 ORTHO05D000427 1.2e-75 287.0 207 68.6
Phvul.004G130750 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 3.0e-66 255.8 167 73.1
Phvul.004G130800 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 7.3e-49 198.0 153 66.0
Phvul.004G130400 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.1e-48 196.4 200 52.5
VMungo0464G1990 Vigna mungo HOM05D000535 ORTHO05D000427 2.1e-43 179.9 202 50.5
Phvul.004G130500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.0e-42 177.6 202 47.0
Phvul.004G130600 Phaseolus vulgaris HOM05D013217 ORTHO05D000427 1.4e-36 157.1 197 43.7
Glyma.09G155500 Glycine max HOM05D000535 ORTHO05D000427 6.6e-34 148.3 204 45.1
Medtr6g059650 Medicago truncatula HOM05D000535 ORTHO05D000427 1.3e-32 144.1 208 41.8
Psat1g112600 Pisum sativum HOM05D000535 ORTHO05D000427 2.1e-32 143.3 202 43.1
Lj2g0009599 Lotus japonicus HOM05D000535 ORTHO05D000427 8.1e-32 141.4 197 42.1
Medtr3g463590 Medicago truncatula HOM05D000535 ORTHO05D000427 1.8e-31 140.2 212 45.8
Lalb_Chr01g0008701 Lupinus albus HOM05D000535 ORTHO05D000427 1.5e-30 137.1 214 42.1
Phvul.004G129600 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.5e-30 137.1 207 43.0
arahy.Tifrunner.gnm1.ann1.9N9F55 Arachis hypogaea HOM05D000535 ORTHO05D000427 2.0e-30 136.7 202 43.1
Medtr6g065460 Medicago truncatula HOM05D000535 ORTHO05D000427 2.6e-30 136.3 210 41.0
VMungo0464G1848 Vigna mungo HOM05D013217 ORTHO05D000427 2.6e-30 136.3 208 38.9
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 5.8e-30 135.2 200 43.5
Ca_25239_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 7.6e-30 134.8 198 42.9
arahy.Tifrunner.gnm1.ann1.U2UX9Q Arachis hypogaea HOM05D000535 ORTHO05D000427 3.2e-28 129.4 198 41.4
Lj5g0017298 Lotus japonicus HOM05D000535 ORTHO05D000427 9.3e-28 127.9 214 40.2
Phvul.004G129900 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 9.3e-28 127.9 208 41.3
Medtr6g059730 Medicago truncatula HOM05D000535 ORTHO05D000427 2.7e-27 126.3 196 41.3
Phvul.004G129800 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 7.9e-27 124.8 208 41.3
Medtr6g059680 Medicago truncatula HOM05D000535 ORTHO05D000427 2.3e-26 123.2 198 40.4
Medtr6g059410 Medicago truncatula HOM05D000535 ORTHO05D000427 3.0e-26 122.9 210 39.5
Psat1g112520 Pisum sativum HOM05D000535 ORTHO05D000427 3.0e-26 122.9 197 40.6
Psat0s2953g0120 Pisum sativum HOM05D000535 ORTHO05D000427 1.1e-25 120.9 205 40.0
TPR.G5828 Trifolium pratense HOM05D000535 ORTHO05D000427 1.5e-25 120.6 205 40.0
Phvul.004G129500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.9e-25 120.2 199 43.2
Psat0s4676g0040 Pisum sativum HOM05D000535 ORTHO05D000427 4.3e-25 119.0 210 36.2
Medtr6g059530 Medicago truncatula HOM05D000535 ORTHO05D000427 9.6e-25 117.9 210 39.0
Medtr6g017225 Medicago truncatula HOM05D000535 ORTHO05D000427 4.5e-22 109.0 212 34.0
Psat0s2953g0040 Pisum sativum HOM05D000535 ORTHO05D000427 1.7e-21 107.1 225 36.4
Ca_26737_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 1.1e-20 104.4 206 35.0
arahy.Tifrunner.gnm1.ann1.L4PC56 Arachis hypogaea HOM05D013217 ORTHO05D000427 1.2e-19 100.9 107 47.7
Medtr6g066190 Medicago truncatula HOM05D000535 ORTHO05D000427 1.2e-19 100.9 195 36.4
Medtr6g059760 Medicago truncatula HOM05D000535 ORTHO05D000427 1.0e-18 97.8 212 33.5
Medtr6g009650 Medicago truncatula HOM05D000535 ORTHO05D000427 2.3e-18 96.7 173 37.6
Medtr6g009563 Medicago truncatula HOM05D000535 ORTHO05D000427 3.0e-18 96.3 183 37.2
Psat0s2953g0160 Pisum sativum HOM05D000535 ORTHO05D000427 3.9e-18 95.9 194 37.6
TPR.G8844 Trifolium pratense HOM05D000535 ORTHO05D000427 8.7e-18 94.7 213 34.7
Psat1g116360 Pisum sativum HOM05D000535 ORTHO05D000427 1.1e-17 94.4 196 35.2
Medtr6g066210 Medicago truncatula HOM05D000535 ORTHO05D000427 3.3e-17 92.8 175 38.9
TPR.G8847 Trifolium pratense HOM05D000535 ORTHO05D000427 3.3e-17 92.8 196 35.7
Medtr1g035770 Medicago truncatula HOM05D000535 ORTHO05D000427 2.1e-16 90.1 199 36.2
Medtr6g045403 Medicago truncatula HOM05D000535 ORTHO05D000427 2.8e-16 89.7 211 32.2
Lalb_Chr03g0033261 Lupinus albus HOM05D000535 ORTHO05D000427 4.8e-16 89.0 207 33.3
VMungo0464G2067 Vigna mungo HOM05D000535 ORTHO05D000427 1.1e-15 87.8 181 33.1
Medtr6g045433 Medicago truncatula HOM05D000535 ORTHO05D000427 3.1e-15 86.3 211 33.6
Medtr6g044780 Medicago truncatula HOM05D000535 ORTHO05D000427 1.5e-14 84.0 209 32.1
Medtr6g045097 Medicago truncatula HOM05D000535 ORTHO05D000427 2.0e-14 83.6 209 31.6
TPR.G5846 Trifolium pratense HOM05D000535 ORTHO05D000427 2.0e-14 83.6 191 31.4
Medtr6g044810 Medicago truncatula HOM05D000535 ORTHO05D000427 1.1e-12 77.8 209 31.6
VMungo0464G1632 Vigna mungo HOM05D000535 ORTHO05D000427 5.5e-12 75.5 180 32.2
Glyma.08G341700 Glycine max HOM05D000535 ORTHO05D011300 7.1e-12 75.1 205 31.2
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 1.6e-11 73.9 205 32.2
TWI12G0051 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 3.5e-11 72.8 204 28.9
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 6.1e-11 72.0 201 32.8
CiPaw.16G075200 Carya illinoinensis HOM05D000535 ORTHO05D000427 7.9e-11 71.6 167 29.3
VMungo0464G0329 Vigna mungo HOM05D000535 ORTHO05D000427 1.3e-10 70.9 207 30.0
Cc00_g04330 Coffea canephora HOM05D000535 ORTHO05D000427 3.9e-10 69.3 197 30.5
TWI15G0556 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 3.9e-10 69.3 207 29.0
DCAR_021971 Daucus carota HOM05D000535 ORTHO05D000427 5.1e-10 68.9 145 33.8
Glyma.08G341500 Glycine max HOM05D010343 ORTHO05D011300 5.1e-10 68.9 211 28.9
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 6.7e-10 68.6 197 30.5
COL.COLO4_16157 Corchorus olitorius HOM05D000535 ORTHO05D000427 6.7e-10 68.6 216 30.6
DCAR_011686 Daucus carota HOM05D000535 ORTHO05D000427 1.1e-09 67.8 196 29.6
arahy.Tifrunner.gnm1.ann1.K2SWWG Arachis hypogaea HOM05D000535 ORTHO05D000427 1.9e-09 67.0 168 29.2
CAN.G929.9 Capsicum annuum HOM05D000535 ORTHO05D000427 1.9e-09 67.0 192 28.1
Sc14g0008190 Simmondsia chinensis HOM05D000535 ORTHO05D000427 1.9e-09 67.0 176 29.5
arahy.Tifrunner.gnm1.ann1.91JQUG Arachis hypogaea HOM05D000535 ORTHO05D000427 2.5e-09 66.6 118 39.0
Solyc06g072210.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 4.3e-09 65.9 191 29.8
TPR.G27454 Trifolium pratense HOM05D000535 ORTHO05D000427 4.3e-09 65.9 195 26.2
Medtr6g059755 Medicago truncatula HOM05D013217 ORTHO05D000427 7.4e-09 65.1 109 35.8
Peaxi162Scf00171g00131 Petunia axillaris HOM05D000535 ORTHO05D000427 1.3e-08 64.3 178 26.4
DCAR_021972 Daucus carota HOM05D000535 ORTHO05D000427 2.8e-08 63.2 155 31.0
Lj5P167T32 Lonicera japonica HOM05D000535 ORTHO05D000427 3.7e-08 62.8 174 26.4
Sopen06g028530 Solanum pennellii HOM05D000535 ORTHO05D000427 4.8e-08 62.4 166 29.5
Lalb_Chr14g0370191 Lupinus albus HOM05D000535 ORTHO05D000427 6.3e-08 62.0 198 24.2
Phvul.004G129700 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 6.3e-08 62.0 206 30.1
COL.COLO4_16143 Corchorus olitorius HOM05D000535 ORTHO05D000427 1.4e-07 60.8 216 29.6
PGSC0003DMG400026967 Solanum tuberosum HOM05D000535 ORTHO05D000427 1.8e-07 60.5 184 28.3
TPR.G27457 Trifolium pratense HOM05D000535 ORTHO05D000427 1.2e-06 57.8 172 26.2
arahy.Tifrunner.gnm1.ann1.RZR4T8 Arachis hypogaea HOM05D000535 ORTHO05D000427 1.5e-06 57.4 169 27.8


User provided reference genes

Program Settings