Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G119400 Phaseolus vulgaris HOM05D007270 ORTHO05D009126 3.0e-69 265.0 128 100.0
VMungo0464G2153 Vigna mungo HOM05D007270 ORTHO05D009126 6.5e-48 194.1 135 76.3
Glyma.16G196000 Glycine max HOM05D007270 ORTHO05D009126 1.8e-37 159.5 130 68.5
Glyma.09G143000 Glycine max HOM05D007270 ORTHO05D009126 1.7e-32 142.9 134 63.4
Psat0ss2830g0200 Pisum sativum HOM05D007270 ORTHO05D009126 3.8e-32 141.7 116 61.2
Medtr0022s0200 Medicago truncatula HOM05D007270 ORTHO05D009126 2.0e-28 129.4 114 61.4
TPR.G10771 Trifolium pratense HOM05D007270 ORTHO05D009126 9.7e-28 127.1 120 57.5
Lj2g0001956 Lotus japonicus HOM05D007270 ORTHO05D009126 1.3e-27 126.7 137 56.9
Thecc.03G173300 Theobroma cacao HOM05D007270 ORTHO05D009126 2.6e-20 102.4 120 54.2
Lalb_Chr06g0161061 Lupinus albus HOM05D007270 ORTHO05D009126 7.4e-20 100.9 117 49.6
Hma1.2p1_2094F.1_g313960 Hydrangea macrophylla HOM05D007270 ORTHO05D009126 1.3e-19 100.1 96 58.3
CsaV3_3G016970 Cucumis sativus L. HOM05D007270 ORTHO05D009126 1.7e-19 99.8 107 53.3
MD07G1266700 Malus domestica HOM05D007270 ORTHO05D009126 1.7e-19 99.8 112 52.7
Dinv28460 Davidia involucrata HOM05D007270 ORTHO05D009126 6.3e-19 97.8 94 57.4
Sed0022823 Sechium edule HOM05D007270 ORTHO05D009126 1.4e-18 96.7 108 54.6
Sed0026018 Sechium edule HOM05D007270 ORTHO05D009126 1.4e-18 96.7 106 55.7
ClCG05G007940 Citrullus lanatus HOM05D007270 ORTHO05D009126 2.4e-18 95.9 99 55.6
Manes.14G027400 Manihot esculenta HOM05D007270 ORTHO05D009126 4.1e-18 95.1 111 55.0
Dinv35199 Davidia involucrata HOM05D007270 ORTHO05D009126 7.0e-18 94.4 94 57.4
Gohir.A08G100400 Gossypium hirsutum HOM05D007270 ORTHO05D009126 9.1e-18 94.0 114 50.0
Gohir.D08G111600 Gossypium hirsutum HOM05D007270 ORTHO05D009126 9.1e-18 94.0 114 50.9
Duzib205G1728 Durio zibethinus HOM05D007270 ORTHO05D009126 1.2e-17 93.6 116 51.7
LjContig00238g0018696 Lotus japonicus HOM05D007270 ORTHO05D009126 1.2e-17 93.6 135 47.4
TWI39G0237 Tripterygium wilfordii HOM05D007270 ORTHO05D009126 2.0e-17 92.8 119 50.4
Prupe.2G292300 Prunus persica HOM05D007270 ORTHO05D009126 2.6e-17 92.4 94 57.4
Ciclev10006265m.g Citrus clementina HOM05D007270 ORTHO05D009126 3.5e-17 92.0 115 47.8
Glyma.10G237600 Glycine max HOM05D007270 ORTHO05D009126 3.5e-17 92.0 125 46.4
Gorai.004G119700 Gossypium raimondii HOM05D007270 ORTHO05D009126 4.5e-17 91.7 114 50.0
VMungo0481G0001 Vigna mungo HOM05D007270 ORTHO05D009126 4.5e-17 91.7 129 47.3
arahy.Tifrunner.gnm1.ann1.Y59FV0 Arachis hypogaea HOM05D007270 ORTHO05D009126 7.7e-17 90.9 136 46.3
Gorai.006G047600 Gossypium raimondii HOM05D007270 ORTHO05D009126 1.0e-16 90.5 112 48.2
Duzib084G1249 Durio zibethinus HOM05D007270 ORTHO05D009126 1.7e-16 89.7 116 53.4
RcHm_v2.0_Chr1g0376981 Rosa chinensis HOM05D007270 ORTHO05D009126 1.7e-16 89.7 110 50.0
Hma1.2p1_0270F.1_g108240 Hydrangea macrophylla HOM05D007270 ORTHO05D009126 2.2e-16 89.4 95 53.7
Duzib068G0291 Durio zibethinus HOM05D007270 ORTHO05D009126 2.9e-16 89.0 111 50.5
Gohir.D09G041400 Gossypium hirsutum HOM05D007270 ORTHO05D009126 6.5e-16 87.8 113 46.0
Phvul.007G068000 Phaseolus vulgaris HOM05D007270 ORTHO05D009126 6.5e-16 87.8 111 50.5
QL09p014589 Quercus lobata HOM05D007270 ORTHO05D009126 6.5e-16 87.8 109 50.5
COL.COLO4_14286 Corchorus olitorius HOM05D007270 ORTHO05D009126 1.1e-15 87.0 140 46.4
TAR375G1025 Trochodendron aralioides HOM05D007270 ORTHO05D009126 1.1e-15 87.0 106 50.0
Actinidia03115 Actinidia chinensis HOM05D007270 ORTHO05D009126 1.9e-15 86.3 115 47.0
MD01G1198900 Malus domestica HOM05D007270 ORTHO05D009126 2.5e-15 85.9 94 54.3
Atru.chr1.483 Acer truncatum HOM05D007270 ORTHO05D009126 3.2e-15 85.5 110 50.0
Glyma.20G157001 Glycine max HOM05D007270 ORTHO05D009126 3.2e-15 85.5 107 49.5
arahy.Tifrunner.gnm1.ann1.89K6QE Arachis hypogaea HOM05D007270 ORTHO05D009126 4.2e-15 85.1 99 49.5
FAN10G3505 Fragaria x ananassa HOM05D007270 ORTHO05D009126 5.5e-15 84.7 110 47.3
FAN01G3083 Fragaria x ananassa HOM05D007270 ORTHO05D009126 7.2e-15 84.3 110 47.3
Nitab4.5_0000716g0240 Nicotiana tabacum HOM05D007270 ORTHO05D009126 7.2e-15 84.3 97 47.4
FAN06G1959 Fragaria x ananassa HOM05D007270 ORTHO05D009126 9.4e-15 84.0 110 47.3
FAN06G2673 Fragaria x ananassa HOM05D007270 ORTHO05D009126 9.4e-15 84.0 110 47.3
FvH4_7g29230 Fragaria vesca HOM05D007270 ORTHO05D009126 1.2e-14 83.6 102 50.0
Gohir.A12G259600 Gossypium hirsutum HOM05D007270 ORTHO05D009126 1.6e-14 83.2 115 48.7
Nn1g01405 Nelumbo nucifera HOM05D007270 ORTHO05D009126 1.6e-14 83.2 103 48.5
MSTRG.8447 Avicennia marina HOM05D007270 ORTHO05D009126 2.1e-14 82.8 95 53.7
FAN03G3015 Fragaria x ananassa HOM05D007270 ORTHO05D009126 2.1e-14 82.8 110 46.4
FAN03G0438 Fragaria x ananassa HOM05D007270 ORTHO05D009126 2.7e-14 82.4 110 46.4
TWI23G0245 Tripterygium wilfordii HOM05D007270 ORTHO05D009126 2.7e-14 82.4 109 48.6
Gorai.008G279000 Gossypium raimondii HOM05D007270 ORTHO05D009126 3.6e-14 82.0 115 48.7
Sabra12G0104200 Salix brachista HOM05D007270 ORTHO05D009126 3.6e-14 82.0 116 46.6
TAR374G0261 Trochodendron aralioides HOM05D007270 ORTHO05D009126 3.6e-14 82.0 106 48.1
Cc02_g03180 Coffea canephora HOM05D007270 ORTHO05D009126 8.0e-14 80.9 98 54.1
CDE02G2351 Ceratophyllum demersum HOM05D007270 ORTHO05D009126 1.0e-13 80.5 117 43.6
Haze_13735 Corylus avellana HOM05D007270 ORTHO05D009126 1.0e-13 80.5 119 47.1
arahy.Tifrunner.gnm1.ann1.LNQ50U Arachis hypogaea HOM05D007270 ORTHO05D009126 1.4e-13 80.1 96 46.9
Potri.015G140800 Populus trichocarpa HOM05D007270 ORTHO05D009126 1.4e-13 80.1 100 51.0
MELO3C006894.2 Cucumis melo HOM05D007270 ORTHO05D009126 1.8e-13 79.7 105 45.7
Gohir.D12G260400 Gossypium hirsutum HOM05D007270 ORTHO05D009126 1.8e-13 79.7 115 49.6
Peaxi162Scf00915g00024 Petunia axillaris HOM05D007270 ORTHO05D009126 3.0e-13 79.0 111 47.7
Nitab4.5_0001508g0050 Nicotiana tabacum HOM05D007270 ORTHO05D009126 4.0e-13 78.6 98 48.0
Solyc03g026000.4 Solanum lycopersicum HOM05D007270 ORTHO05D009126 5.2e-13 78.2 97 49.5
Sopen03g004830 Solanum pennellii HOM05D007270 ORTHO05D009126 5.2e-13 78.2 97 49.5
PGSC0003DMG400014284 Solanum tuberosum HOM05D007270 ORTHO05D009126 6.8e-13 77.8 97 49.5
Rhsim09G0197400 Rhododendron simsii HOM05D007270 ORTHO05D009126 8.8e-13 77.4 99 46.5
Hma1.2p1_1323F.1_g275600 Hydrangea macrophylla HOM05D007270 ORTHO05D009126 1.2e-12 77.0 59 64.4
Gohir.A09G040765 Gossypium hirsutum HOM05D007270 ORTHO05D009126 1.5e-12 76.6 130 40.8
CANSAT21G0701 Cannabis sativa HOM05D007270 ORTHO05D009126 2.0e-12 76.3 95 50.5
MBI12_g14428_MAGBIO Magnolia biondii HOM05D007270 ORTHO05D009126 2.0e-12 76.3 115 44.3
MBI12_g15032_MAGBIO Magnolia biondii HOM05D007270 ORTHO05D009126 2.0e-12 76.3 115 44.3
Migut.F00356 Erythranthe guttata HOM05D007270 ORTHO05D009126 3.4e-12 75.5 94 50.0
Aqoxy7G00397 Aquilegia oxysepala HOM05D007270 ORTHO05D009126 2.2e-11 72.8 113 40.7
Eucgr.K00240 Eucalyptus grandis HOM05D007270 ORTHO05D009126 3.7e-11 72.0 108 46.3
Oeu061638.1 Olea europaea HOM05D007270 ORTHO05D009126 3.7e-11 72.0 96 49.0
MSTRG.27125 Avicennia marina HOM05D007270 ORTHO05D009126 4.8e-11 71.6 95 49.5
SalBow4G1292 Salvia bowleyana HOM05D007270 ORTHO05D009126 4.8e-11 71.6 94 47.9
SalBow4G1320 Salvia bowleyana HOM05D007270 ORTHO05D009126 4.8e-11 71.6 94 47.9
Sc13g0008530 Simmondsia chinensis HOM05D007270 ORTHO05D009126 4.8e-11 71.6 97 43.3
CDE11G1162 Ceratophyllum demersum HOM05D007270 ORTHO05D009126 1.1e-10 70.5 111 40.5
Eucgr.A02802 Eucalyptus grandis HOM05D007270 ORTHO05D009126 1.1e-10 70.5 129 39.5
PGR142G1670 Punica granatum HOM05D007270 ORTHO05D009126 1.1e-10 70.5 100 42.0
EL10Ac3g05666 Beta vulgaris HOM05D007270 ORTHO05D009126 3.1e-10 68.9 98 43.9
Hund11759 Selenicereus undatus HOM05D050443 ORTHO05D009126 9.1e-10 67.4 119 38.7
Hund28785 Selenicereus undatus HOM05D050443 ORTHO05D009126 9.1e-10 67.4 119 38.7
GSVIVG01010593001 Vitis vinifera HOM05D007270 ORTHO05D009126 1.6e-09 66.6 75 54.7
MBI04_g04728_MAGBIO Magnolia biondii HOM05D007270 ORTHO05D009126 4.5e-09 65.1 100 41.0
Lsat_1_v5_gn_0_29801 Lactuca sativa HOM05D007270 ORTHO05D009126 5.9e-09 64.7 99 45.5
Cfa008302 Carpinus fangiana HOM05D007270 ORTHO05D009126 1.7e-08 63.2 86 54.7
Lsat_1_v5_gn_0_29881 Lactuca sativa HOM05D007270 ORTHO05D009126 2.2e-08 62.8 94 42.6
Ca_10783_v3 Cicer arietinum L. HOM05D007270 ORTHO05D009126 5.0e-08 61.6 116 40.5
PSO478G4124 Papaver somniferum HOM05D007270 ORTHO05D009126 6.5e-08 61.2 118 38.1
CiPaw.04G065800 Carya illinoinensis HOM05D007270 ORTHO05D009126 1.9e-07 59.7 101 45.5
Lsat_1_v5_gn_0_29861 Lactuca sativa HOM05D007270 ORTHO05D009126 1.9e-07 59.7 103 40.8
DCAR_018187 Daucus carota HOM05D007270 ORTHO05D009126 2.5e-07 59.3 108 40.7
CiPaw.03G104500 Carya illinoinensis HOM05D007270 ORTHO05D009126 3.2e-07 58.9 82 50.0
ECA232G2863 Erigeron canadensis HOM05D007270 ORTHO05D009126 7.2e-07 57.8 96 38.5
Gohir.D12G069603 Gossypium hirsutum HOM05D007270 ORTHO05D009126 1.2e-06 57.0 74 45.9
HanXRQChr09g0253491 Helianthus annuus HOM05D007270 ORTHO05D009126 1.2e-06 57.0 95 40.0
PSO782G1298 Papaver somniferum HOM05D007270 ORTHO05D009126 8.0e-06 54.3 121 37.2


User provided reference genes

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