Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 6.1e-76 287.3 138 100.0
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.3e-70 269.6 138 92.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 2.9e-70 268.5 138 92.0
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.2e-62 242.3 138 83.3
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 7.2e-61 237.3 113 98.2
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 6.3e-57 224.2 146 79.5
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 6.3e-57 224.2 145 79.3
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.0e-55 219.2 138 74.6
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 5.0e-54 214.5 138 73.9
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.8e-48 196.1 118 76.3
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.9e-45 186.0 145 66.9
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.2e-42 176.8 142 62.0
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.3e-41 173.3 127 67.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.2e-41 172.6 117 70.1
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 2.8e-41 172.2 120 68.3
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.8e-41 171.4 127 66.1
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.1e-40 170.2 127 64.6
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.1e-40 170.2 127 65.4
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.1e-40 170.2 127 66.1
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.4e-40 169.9 120 67.5
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.4e-40 169.9 129 62.8
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 1.4e-40 169.9 143 60.8
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.4e-40 169.9 124 66.9
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.8e-40 169.5 125 65.6
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.4e-40 169.1 118 66.9
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 2.4e-40 169.1 130 62.3
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 3.1e-40 168.7 126 61.1
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 4.1e-40 168.3 129 59.7
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 5.4e-40 167.9 139 59.0
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 7.0e-40 167.5 125 68.0
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 7.0e-40 167.5 125 68.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.6e-39 166.4 121 66.1
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.0e-39 166.0 124 63.7
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.7e-39 165.6 129 61.2
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.7e-39 165.6 117 67.5
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 2.7e-39 165.6 128 64.8
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.7e-39 165.6 121 66.9
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.7e-39 165.6 125 64.8
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 3.5e-39 165.2 148 56.1
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.5e-39 164.9 117 65.0
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 5.9e-39 164.5 120 65.0
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 5.9e-39 164.5 129 59.7
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 7.7e-39 164.1 118 66.9
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.0e-38 163.7 150 55.3
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.0e-38 163.7 144 59.0
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.0e-38 163.7 125 61.6
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.3e-38 163.3 129 59.7
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.3e-38 163.3 123 63.4
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.3e-38 163.3 116 65.5
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.7e-38 162.9 121 66.1
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-38 162.9 123 63.4
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-38 162.9 123 63.4
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 2.2e-38 162.5 128 63.3
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 2.2e-38 162.5 129 61.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.2e-38 162.5 118 66.1
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.2e-38 162.5 131 62.6
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.8e-38 161.8 141 56.0
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 8.5e-38 160.6 133 61.7
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.5e-37 159.8 123 62.6
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.5e-37 159.8 130 63.1
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.5e-37 159.8 128 59.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.5e-37 159.8 130 62.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.9e-37 159.5 119 63.9
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 3.2e-37 158.7 124 62.9
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.2e-37 158.7 128 60.2
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.2e-37 158.7 122 63.9
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.2e-37 157.5 119 63.0
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.2e-36 156.8 120 61.7
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.6e-36 156.4 114 65.8
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 2.7e-36 155.6 115 66.1
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 3.6e-36 155.2 127 59.1
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 3.6e-36 155.2 118 62.7
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.3e-35 152.5 115 68.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.3e-35 152.5 118 64.4
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 3.0e-35 152.1 119 63.0
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 3.0e-35 152.1 115 67.8
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 3.0e-35 152.1 115 67.8
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 4.0e-35 151.8 115 67.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 4.0e-35 151.8 114 67.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 4.0e-35 151.8 128 61.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 4.0e-35 151.8 120 62.5
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 4.0e-35 151.8 135 60.7
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 5.2e-35 151.4 115 67.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 8.8e-35 150.6 115 67.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 8.8e-35 150.6 126 54.8
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.2e-34 150.2 114 67.5
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.6e-34 149.1 115 66.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-34 149.1 122 62.3
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 3.4e-34 148.7 114 66.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 7.5e-34 147.5 120 64.2
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 9.8e-34 147.1 137 51.8
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.7e-33 145.2 120 59.2
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.9e-33 144.8 115 64.3
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 6.3e-33 144.4 138 50.7
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 8.3e-33 144.1 114 64.0
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 8.3e-33 144.1 131 55.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.8e-32 142.9 120 58.3
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.4e-32 142.5 136 58.8
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.4e-32 142.5 115 63.5
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.7e-31 139.0 126 60.3
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.9e-29 132.9 88 75.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 2.1e-28 129.4 135 51.1
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.5e-26 123.2 148 43.2
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 2.2e-25 119.4 128 47.7
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 6.3e-25 117.9 139 46.0
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.8e-24 116.3 117 52.1
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 2.4e-24 115.9 80 68.8
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 3.5e-23 112.1 118 50.0
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.6e-20 102.1 71 64.8
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 3.7e-17 92.0 130 38.5
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.9e-16 89.7 50 76.0
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 9.2e-16 87.4 57 64.9
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.3e-13 79.0 118 42.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 7.3e-13 77.8 80 51.2
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 5.8e-10 68.2 113 37.2


User provided reference genes

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