Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.2e-104 382.5 221 100.0
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 9.0e-82 307.4 220 83.6
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 4.4e-68 261.9 226 70.4
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 9.4e-63 244.2 221 65.2
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 5.3e-58 228.4 229 61.6
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.3e-53 213.0 225 58.2
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 6.8e-53 211.5 224 58.0
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 2.4e-50 203.0 245 53.1
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 2.0e-44 183.3 248 48.8
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 2.2e-43 179.9 248 48.4
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 2.3e-40 169.9 236 54.2
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 5.0e-40 168.7 262 53.4
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.5e-39 167.2 261 53.3
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 3.3e-39 166.0 237 49.4
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 4.3e-39 165.6 236 47.0
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 4.3e-39 165.6 236 47.0
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 2.1e-38 163.3 243 46.1
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 2.1e-38 163.3 227 44.9
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 4.7e-38 162.2 243 46.1
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 1.4e-37 160.6 254 42.9
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 1.8e-37 160.2 140 63.6
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.2e-36 157.5 216 51.4
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 2.0e-36 156.8 247 49.8
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 3.4e-36 156.0 246 44.7
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 5.7e-36 155.2 221 44.3
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 7.5e-36 154.8 241 48.1
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 9.8e-36 154.5 245 48.2
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 9.8e-36 154.5 238 49.2
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 9.8e-36 154.5 239 43.1
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 1.3e-35 154.1 225 50.7
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 3.7e-35 152.5 248 48.0
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 4.9e-35 152.1 245 47.8
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 8.3e-35 151.4 162 59.9
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 8.3e-35 151.4 240 46.7
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.4e-34 150.6 237 40.9
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 4.1e-34 149.1 243 46.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 5.4e-34 148.7 266 45.5
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 5.4e-34 148.7 236 47.5
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 7.0e-34 148.3 229 47.6
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.2e-33 147.5 214 45.8
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.6e-33 147.1 256 46.9
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 2.0e-33 146.7 240 43.3
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.7e-33 146.4 235 43.0
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 3.5e-33 146.0 232 48.7
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 5.9e-33 145.2 170 48.2
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 5.9e-33 145.2 247 44.5
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 7.8e-33 144.8 262 46.9
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 1.0e-32 144.4 211 42.7
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.7e-32 143.7 222 48.2
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.3e-32 143.3 228 46.1
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.0e-32 142.9 85 76.5
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 3.9e-32 142.5 232 43.5
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 5.0e-32 142.1 228 41.2
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 5.0e-32 142.1 218 41.3
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 5.0e-32 142.1 214 46.7
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 6.6e-32 141.7 241 44.8
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 8.6e-32 141.4 219 41.6
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 8.6e-32 141.4 228 50.9
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 8.6e-32 141.4 255 50.2
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.1e-31 141.0 232 46.6
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.5e-31 140.6 235 50.6
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 1.5e-31 140.6 166 48.2
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.5e-31 140.6 80 77.5
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.5e-31 139.8 228 46.5
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 9.5e-31 137.9 236 50.0
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 1.2e-30 137.5 220 43.2
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.2e-30 137.5 227 43.2
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.6e-30 137.1 227 48.9
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 1.6e-30 137.1 218 41.3
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.6e-30 137.1 94 69.1
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.6e-30 137.1 233 48.5
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.6e-30 137.1 218 40.4
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 1.6e-30 137.1 162 48.1
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 3.6e-30 136.0 238 44.1
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 4.7e-30 135.6 235 44.7
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 8.0e-30 134.8 221 40.7
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 1.4e-29 134.0 219 41.6
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 1.8e-29 133.7 236 44.9
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 2.3e-29 133.3 218 41.3
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 2.3e-29 133.3 219 41.6
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 2.3e-29 133.3 218 41.3
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 3.1e-29 132.9 215 40.5
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 4.0e-29 132.5 199 44.7
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 4.0e-29 132.5 79 75.9
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 6.8e-29 131.7 232 42.7
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 6.8e-29 131.7 219 41.6
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 6.8e-29 131.7 160 44.4
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-28 131.0 216 41.2
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.2e-28 131.0 216 41.2
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.2e-28 131.0 260 46.5
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.2e-28 131.0 214 49.5
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.2e-28 131.0 238 47.1
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.2e-28 131.0 215 40.0
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.5e-28 130.6 231 45.9
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 2.0e-28 130.2 219 41.1
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 2.0e-28 130.2 219 50.2
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 2.6e-28 129.8 217 39.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 4.4e-28 129.0 81 72.8
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 4.4e-28 129.0 222 40.5
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 4.4e-28 129.0 239 48.5
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.7e-27 127.1 251 39.8
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.7e-27 127.1 225 40.0
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 2.9e-27 126.3 219 44.3
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.9e-27 126.3 227 47.6
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.7e-27 125.9 238 43.3
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.7e-27 125.9 220 39.5
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 8.3e-27 124.8 213 41.8
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 8.3e-27 124.8 213 41.8
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.1e-26 124.4 74 75.7
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 1.9e-26 123.6 226 50.0
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 2.4e-26 123.2 79 65.8
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 2.4e-26 123.2 225 44.0
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 5.4e-26 122.1 219 39.7
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.4e-26 122.1 217 41.0
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 5.4e-26 122.1 79 73.4
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 2.0e-25 120.2 268 41.8
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.0e-25 120.2 226 42.0
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.0e-25 120.2 225 39.6
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.3e-24 116.7 241 38.6
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 3.9e-24 115.9 86 66.3
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 3.9e-24 115.9 218 42.7
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 6.6e-24 115.2 221 39.8
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 3.3e-23 112.8 221 39.8
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 4.3e-23 112.5 86 64.0
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 4.7e-22 109.0 79 63.3
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.1e-21 107.8 219 39.3
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 1.8e-21 107.1 76 65.8
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 2.3e-21 106.7 94 57.4
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 6.8e-21 105.1 214 36.4
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 6.8e-21 105.1 214 36.4
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.2e-20 104.4 103 49.5
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 7.5e-20 101.7 206 34.5
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 7.5e-20 101.7 226 33.2
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.9e-19 99.8 77 59.7
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 3.7e-19 99.4 214 33.6
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.1e-18 97.8 157 36.9
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 9.2e-18 94.7 77 55.8
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 6.6e-16 88.6 78 55.1
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.2e-12 77.8 192 40.1
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 3.4e-12 76.3 215 30.2


User provided reference genes

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