Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.6e-89 332.0 170 100.0
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 3.7e-83 311.6 170 93.5
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 2.6e-81 305.4 167 93.4
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 1.5e-76 289.7 167 86.8
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 3.7e-75 285.0 167 86.2
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 1.1e-74 283.5 165 86.7
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 1.4e-74 283.1 167 85.6
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 1.7e-72 276.2 165 85.5
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 5.5e-71 271.2 153 86.3
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 5.5e-71 271.2 155 85.2
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 1.6e-70 269.6 163 81.0
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 4.7e-70 268.1 167 80.2
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 6.1e-70 267.7 162 80.9
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 1.4e-69 266.5 165 81.8
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 2.3e-69 265.8 164 81.1
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 3.0e-69 265.4 166 78.3
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 3.0e-69 265.4 165 79.4
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 4.0e-69 265.0 158 81.6
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 4.0e-69 265.0 169 79.3
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 5.2e-69 264.6 169 78.7
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 6.8e-69 264.2 152 84.9
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 6.8e-69 264.2 161 80.1
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 1.2e-68 263.5 164 79.9
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 1.2e-68 263.5 164 79.9
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 1.5e-68 263.1 180 73.9
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 1.5e-68 263.1 171 78.4
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.5e-68 263.1 164 79.9
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.5e-68 263.1 169 77.5
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 1.5e-68 263.1 167 79.0
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 2.0e-68 262.7 164 79.9
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 2.0e-68 262.7 165 79.4
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 2.6e-68 262.3 166 78.9
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 2.6e-68 262.3 166 78.9
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 2.6e-68 262.3 167 78.4
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 2.6e-68 262.3 164 79.3
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 3.4e-68 261.9 164 79.3
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 3.4e-68 261.9 166 78.9
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 3.4e-68 261.9 166 78.9
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 4.4e-68 261.5 164 79.9
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 4.4e-68 261.5 180 75.6
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 5.7e-68 261.2 167 79.6
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 5.7e-68 261.2 164 78.7
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 5.7e-68 261.2 167 77.8
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 7.5e-68 260.8 167 76.0
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 7.5e-68 260.8 166 78.3
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 7.5e-68 260.8 164 79.3
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 7.5e-68 260.8 166 78.3
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 7.5e-68 260.8 153 83.7
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 7.5e-68 260.8 168 79.8
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 9.8e-68 260.4 169 76.3
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 9.8e-68 260.4 171 76.0
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 1.3e-67 260.0 167 79.0
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 1.3e-67 260.0 162 81.5
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 1.7e-67 259.6 164 78.7
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 1.7e-67 259.6 170 79.4
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 1.7e-67 259.6 176 76.7
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.7e-67 259.6 164 78.7
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.7e-67 259.6 168 78.6
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.2e-67 259.2 171 78.4
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 2.2e-67 259.2 168 79.2
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.8e-67 258.8 168 78.6
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 3.7e-67 258.5 164 78.0
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 3.7e-67 258.5 164 78.7
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 4.8e-67 258.1 168 78.6
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.8e-67 258.1 168 78.6
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 4.8e-67 258.1 163 79.1
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 4.8e-67 258.1 180 73.3
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 6.3e-67 257.7 168 78.0
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 6.3e-67 257.7 168 78.0
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 8.3e-67 257.3 164 78.0
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 8.3e-67 257.3 180 73.3
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 8.3e-67 257.3 164 78.7
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 1.1e-66 256.9 163 77.3
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 1.4e-66 256.5 164 78.0
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 1.4e-66 256.5 164 78.0
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 1.8e-66 256.1 164 78.0
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.8e-66 256.1 168 78.0
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.8e-66 256.1 168 78.0
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.8e-66 256.1 152 82.9
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 1.8e-66 256.1 151 81.5
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.4e-66 255.8 164 77.4
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 2.4e-66 255.8 166 78.9
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 2.4e-66 255.8 171 77.2
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 3.1e-66 255.4 164 77.4
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 3.1e-66 255.4 146 85.6
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 4.1e-66 255.0 164 77.4
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 4.1e-66 255.0 164 76.8
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 4.1e-66 255.0 151 82.8
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 5.4e-66 254.6 165 78.2
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 7.0e-66 254.2 169 76.9
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 7.0e-66 254.2 173 76.3
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 9.1e-66 253.8 164 78.0
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 1.2e-65 253.4 171 78.4
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 1.2e-65 253.4 171 74.9
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 2.0e-65 252.7 169 74.6
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 2.0e-65 252.7 160 78.8
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 3.5e-65 251.9 173 76.3
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 7.7e-65 250.8 172 75.0
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 1.3e-64 250.0 164 75.6
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 1.3e-64 250.0 168 74.4
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.7e-64 249.6 169 75.1
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.7e-64 249.6 164 76.2
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 1.7e-64 249.6 164 74.4
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 1.7e-64 249.6 167 76.6
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 1.7e-64 249.6 173 76.3
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 2.2e-64 249.2 155 81.3
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 2.2e-64 249.2 173 76.3
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 2.9e-64 248.8 155 79.4
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 2.9e-64 248.8 167 77.2
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 5.0e-64 248.1 171 73.1
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 5.0e-64 248.1 171 73.1
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-64 248.1 164 75.6
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-64 248.1 164 75.6
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 5.0e-64 248.1 166 77.1
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 8.5e-64 247.3 180 71.1
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 1.1e-63 246.9 163 74.8
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 3.2e-63 245.4 170 74.1
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 3.2e-63 245.4 174 74.1
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 5.5e-63 244.6 174 74.1
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 1.2e-62 243.4 167 73.7
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.6e-62 243.0 164 74.4
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-62 243.0 168 75.0
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-62 243.0 168 75.0
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 3.6e-62 241.9 174 73.6
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 4.7e-62 241.5 164 74.4
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 4.7e-62 241.5 164 74.4
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 6.1e-62 241.1 156 76.9
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 8.0e-62 240.7 169 72.2
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 5.2e-61 238.0 156 74.4
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 6.8e-61 237.7 225 57.8
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 8.8e-61 237.3 154 75.3
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 1.2e-60 236.9 172 69.8
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 2.6e-60 235.7 169 72.2
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 7.5e-60 234.2 169 70.4
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 3.1e-58 228.8 146 74.0
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 4.5e-57 224.9 138 76.8
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 1.0e-56 223.8 138 76.1
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 9.5e-55 217.2 140 77.9
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 8.9e-53 210.7 168 64.9
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 1.5e-52 209.9 126 81.7
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.8e-50 203.0 164 64.6
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 5.0e-48 194.9 155 60.6
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 2.5e-47 192.6 126 75.4
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 2.8e-46 189.1 132 70.5
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 6.4e-43 177.9 134 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 5.4e-42 174.9 134 64.2
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 2.0e-41 172.9 112 73.2
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 1.3e-40 170.2 108 82.4
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 6.6e-40 167.9 134 59.7
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.9e-39 166.4 168 57.1
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 2.5e-39 166.0 133 58.6
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.4e-37 160.2 187 49.7
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.6e-33 146.7 88 84.1
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 2.1e-33 146.4 91 76.9
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.5e-31 140.2 164 53.0
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 7.3e-31 137.9 86 81.4
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 1.2e-30 137.1 120 54.2
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 3.2e-26 122.5 98 65.3
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.1e-25 119.8 105 65.7
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 3.5e-25 119.0 103 58.3
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 9.6e-23 110.9 124 43.5
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 2.1e-22 109.8 56 85.7
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.7e-22 108.6 175 37.1
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 1.4e-21 107.1 71 73.2
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 9.9e-20 100.9 124 41.1
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 9.9e-20 100.9 124 41.1
AT4G28005 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 3.2e-18 95.9 164 40.9
BcaC03g14494 Brassica carinata HOM05D004003 ORTHO05D004595 2.3e-16 89.7 62 67.7
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 6.6e-16 88.2 100 44.0
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 6.6e-16 88.2 100 44.0
COL.COLO4_06858 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.5e-15 86.3 59 69.5
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 8.1e-14 81.3 52 75.0
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 5.3e-13 78.6 95 38.9
CAN.G640.19 Capsicum annuum HOM05D004003 ORTHO05D004595 3.4e-12 75.9 64 62.5
ATR0721G175 Amborella trichopoda HOM05D004003 ORTHO05D004595 2.2e-11 73.2 52 57.7
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 1.6e-09 67.0 95 41.1


User provided reference genes

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