Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.1e-65 251.5 117 100.0
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 7.5e-43 177.2 107 78.5
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.4e-41 172.2 113 72.6
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.3e-39 166.4 107 72.0
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.0e-35 152.5 115 67.8
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.1e-33 145.2 87 79.3
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.5e-30 136.3 86 72.1
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 8.9e-28 127.1 87 67.8
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-24 116.3 113 50.4
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 3.5e-24 115.2 104 51.0
Phvul.011G112766 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.6e-24 114.8 102 56.9
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 1.7e-23 112.8 107 48.6
Phvul.002G214200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.5e-22 109.0 66 74.2
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-21 106.3 107 49.5
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-21 104.8 113 44.2
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-21 104.4 113 45.1
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 1.4e-20 103.2 111 46.8
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 1.8e-20 102.8 113 46.0
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 5.2e-20 101.3 113 41.6
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 8.9e-20 100.5 102 45.1
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 5.8e-19 97.8 112 40.2
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 7.5e-19 97.4 108 40.7
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-18 96.7 95 48.4
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-18 96.7 104 44.2
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-18 96.7 111 43.2
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 3.7e-18 95.1 112 38.4
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 8.3e-18 94.0 113 43.4
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-17 93.2 101 45.5
Phvul.009G187600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.4e-17 92.4 113 46.0
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 2.4e-17 92.4 113 37.2
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 4.1e-17 91.7 97 45.4
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 5.4e-17 91.3 112 37.5
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 7.0e-17 90.9 96 41.7
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 7.0e-17 90.9 113 38.9
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 9.2e-17 90.5 85 48.2
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-16 90.1 96 45.8
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-16 89.7 91 47.3
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-16 89.0 101 40.6
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-16 89.0 101 40.6
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-15 85.9 101 42.6
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-15 85.9 86 46.5
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-15 85.9 104 37.5
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 3.0e-15 85.5 101 39.6
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 3.0e-15 85.5 107 38.3
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 5.1e-15 84.7 97 44.3
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-15 84.0 100 38.0
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 1.5e-14 83.2 100 39.0
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-14 82.8 89 42.7
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 2.5e-14 82.4 91 44.0
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 4.3e-14 81.6 106 37.7
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 5.6e-14 81.3 96 39.6
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 5.6e-14 81.3 106 37.7
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 5.6e-14 81.3 111 36.0
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 5.6e-14 81.3 89 42.7
FvH4_7g18611 Fragaria vesca HOM05D001538 ORTHO05D000007 7.3e-14 80.9 96 39.6
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 9.5e-14 80.5 106 36.8
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-13 80.1 101 39.6
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-13 80.1 98 38.8
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 2.8e-13 79.0 106 35.8
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-13 78.6 87 41.4
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 4.7e-13 78.2 104 31.7
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 4.7e-13 78.2 87 43.7
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 4.7e-13 78.2 89 38.2
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-13 77.8 80 48.8
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 6.2e-13 77.8 91 42.9
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 8.1e-13 77.4 96 38.5
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 8.1e-13 77.4 106 35.8
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-12 77.0 100 37.0
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-12 76.6 99 31.3
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-12 76.6 83 41.0
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-12 76.3 110 36.4
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 2.3e-12 75.9 96 37.5
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 3.1e-12 75.5 79 44.3
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 3.1e-12 75.5 95 38.9
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-12 75.1 106 27.4
Phvul.007G135700 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.0e-12 75.1 46 73.9
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 5.2e-12 74.7 104 39.4
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 6.8e-12 74.3 106 36.8
Medtr3g071850 Medicago truncatula HOM05D000051 ORTHO05D000015 6.8e-12 74.3 102 37.3
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 8.9e-12 73.9 106 36.8
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 8.9e-12 73.9 95 35.8
Psat4g149040 Pisum sativum HOM05D001538 ORTHO05D000007 8.9e-12 73.9 79 46.8
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-11 73.6 105 38.1
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-11 73.2 97 39.2
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-11 72.8 94 40.4
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-11 72.8 78 46.2
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 2.6e-11 72.4 106 35.8
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.6e-11 72.4 106 35.8
TPR.G28566 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-11 72.4 68 45.6
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 3.4e-11 72.0 106 32.1
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 3.4e-11 72.0 106 37.7
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 3.4e-11 72.0 91 36.3
Medtr5g037100 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-11 72.0 102 37.3
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 4.4e-11 71.6 78 44.9
Medtr0014s0120 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-11 71.2 93 37.6
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 7.5e-11 70.9 107 37.4
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 9.9e-11 70.5 94 37.2
Medtr2g048290 Medicago truncatula HOM05D001538 ORTHO05D000007 9.9e-11 70.5 76 46.1
Medtr4g009745 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-10 70.1 74 41.9
Medtr7g063750 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-10 70.1 59 50.8
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 2.2e-10 69.3 98 37.8
Lj1P491T18 Lonicera japonica HOM05D001538 ORTHO05D000007 3.7e-10 68.6 106 29.2
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 6.4e-10 67.8 106 39.6
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 8.3e-10 67.4 74 43.2
Psat4g031920 Pisum sativum HOM05D001538 ORTHO05D000007 8.3e-10 67.4 69 43.5
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 8.3e-10 67.4 66 47.0
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-09 67.0 80 40.0
Medtr6g042480 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-09 66.6 94 38.3
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-09 65.9 104 26.0
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-09 65.9 101 32.7
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 3.2e-09 65.5 106 34.0
Medtr7g037570 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-09 64.7 69 46.4
TPR.G22375 Trifolium pratense HOM05D001538 ORTHO05D000007 5.4e-09 64.7 61 49.2
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 7.1e-09 64.3 112 31.2
Lj2A1218G28 Lonicera japonica HOM05D012945 ORTHO05D000007 1.2e-08 63.5 104 33.7
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 1.2e-08 63.5 58 48.3
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-08 63.5 67 43.3
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 1.6e-08 63.2 104 32.7
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-08 62.8 106 32.1
Medtr8g069240 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-08 62.8 75 38.7
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 7.8e-08 60.8 70 41.4
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-07 60.5 72 40.3
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-07 60.5 79 35.4
Psat4g074680 Pisum sativum HOM05D001538 ORTHO05D000007 1.0e-07 60.5 60 41.7
Medtr8g022850 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-07 59.3 105 32.4
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 3.9e-07 58.5 81 37.0
Medtr5g036050 Medicago truncatula HOM05D049287 ORTHO05D000007 3.9e-07 58.5 47 48.9
Medtr2g043180 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-07 58.2 66 43.9
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-07 58.2 81 37.0
Medtr5g047910 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-07 58.2 60 45.0
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 5.1e-07 58.2 67 41.8
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 6.6e-07 57.8 59 42.4
Medtr6g049130 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-07 57.4 75 37.3
Medtr6g464500 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-07 57.4 75 40.0
Medtr0063s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-06 57.0 74 33.8
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.1e-06 57.0 69 36.2
Medtr3g050340 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-06 56.2 80 32.5
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-06 56.2 72 37.5
Medtr5g071600 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-06 55.8 69 40.6
TPR.G3483 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-06 55.5 52 46.2
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 4.3e-06 55.1 45 48.9
Medtr3g465060 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-06 55.1 84 32.1
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-06 54.7 74 35.1


User provided reference genes

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