Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 5.6e-206 720.7 363 100.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.1e-183 644.4 353 87.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.9e-162 575.5 362 79.0
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.5e-161 573.2 362 79.0
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.4e-159 566.6 364 77.2
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.4e-158 561.6 361 78.1
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.7e-157 559.7 352 73.0
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.7e-154 549.7 351 74.9
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.6e-150 535.8 354 70.1
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.7e-149 531.9 354 71.5
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.1e-148 530.4 352 71.3
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.8e-148 529.6 353 72.5
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.1e-148 528.9 353 72.8
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.1e-148 528.5 353 69.4
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 7.0e-148 527.7 353 72.0
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.5e-147 525.4 353 71.7
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.3e-146 523.5 353 71.4
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-146 522.7 354 70.9
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 6.5e-146 521.2 364 70.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 7.2e-145 517.7 354 69.2
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.6e-144 516.5 357 66.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.8e-144 515.8 360 67.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 5.2e-143 511.5 351 71.8
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.5e-142 510.0 355 68.7
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 5.7e-142 508.1 354 66.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.7e-142 508.1 354 68.9
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 3.7e-141 505.4 354 66.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.9e-141 505.0 357 66.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 4.1e-140 501.9 351 63.5
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 4.1e-140 501.9 353 67.1
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 7.0e-140 501.1 358 65.9
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.2e-140 500.7 354 66.7
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.2e-139 500.4 351 67.2
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.0e-138 497.3 330 69.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.8e-138 495.4 351 67.5
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.8e-138 495.4 354 66.7
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 5.0e-138 495.0 358 64.8
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 2.5e-137 492.7 351 63.5
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.5e-137 492.7 354 64.1
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.6e-136 488.8 350 63.1
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 6.1e-136 488.0 385 60.8
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.0e-135 487.3 459 53.8
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 3.0e-135 485.7 350 65.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-130 470.3 415 57.6
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.0e-130 469.2 415 57.6
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.1e-129 467.2 351 62.4
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.5e-129 466.8 360 59.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.6e-129 464.9 351 62.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 7.3e-129 464.5 354 62.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.8e-128 462.6 353 68.0
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 4.0e-127 458.8 357 60.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 8.9e-127 457.6 352 61.6
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.6e-126 456.1 364 60.4
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.9e-124 449.9 352 66.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.9e-124 449.9 352 66.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.1e-124 448.7 352 66.2
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 6.0e-123 444.9 360 58.3
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 7.8e-123 444.5 321 63.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 3.6e-120 435.6 352 59.4
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 8.3e-117 424.5 501 46.5
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.1e-116 424.1 362 55.8
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.0e-114 416.0 355 58.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 3.1e-111 406.0 459 49.0
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.5e-105 387.1 194 91.8
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 9.6e-105 384.4 215 88.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 3.3e-97 359.4 286 59.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 4.5e-86 322.4 197 76.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.9e-85 318.9 291 56.4
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 4.2e-84 315.8 243 61.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.5e-81 307.4 357 43.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-76 290.8 367 43.3
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.5e-73 280.8 343 47.2
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 2.1e-67 260.4 148 76.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 3.1e-63 246.5 160 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.5e-61 238.8 233 48.9
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 6.5e-53 212.2 128 84.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.6e-51 207.6 140 64.3
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 6.1e-51 205.7 250 44.8
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 7.0e-47 192.2 366 34.2
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.6e-43 181.0 159 65.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 9.1e-39 165.2 105 69.5
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.2e-38 164.9 422 28.0
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.6e-38 164.5 383 31.6
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.9e-28 131.0 105 57.1
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.3e-28 130.2 73 76.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 5.5e-28 129.4 103 64.1
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-25 121.3 102 57.8
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 7.5e-25 119.0 73 64.4
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 7.5e-25 119.0 73 64.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 3.7e-24 116.7 69 69.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.4e-23 112.8 68 79.4
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.0e-23 112.5 68 77.9
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-22 110.5 68 76.5
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.5e-22 109.8 113 51.3
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.8e-22 109.0 68 76.5
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.9e-21 107.1 109 45.0
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.0e-18 96.7 89 57.3
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 6.8e-18 95.9 164 31.7
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.8e-18 95.9 75 62.7
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 7.5e-17 92.4 55 65.5
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.9e-16 90.5 52 71.2
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.0e-13 79.7 52 65.4
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 2.5e-12 77.4 179 35.2
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 5.6e-12 76.3 57 61.4
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.3e-08 62.4 163 30.7
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-06 58.2 83 34.9


User provided reference genes

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