Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G086800 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 5.4e-107 391.0 190 100.0
Phvul.006G044700 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 1.2e-66 256.9 127 96.1
VMungo0540G2443 Vigna mungo HOM05D000355 ORTHO05D000227 8.9e-62 240.7 130 91.5
Glyma.08G317200 Glycine max HOM05D000355 ORTHO05D000227 2.8e-55 219.2 138 82.6
Glyma.18G095800 Glycine max HOM05D000355 ORTHO05D000227 1.4e-54 216.9 137 81.0
Lj6g0010284 Lotus japonicus HOM05D000355 ORTHO05D000227 5.8e-45 184.9 137 68.6
Lalb_Chr15g0081331 Lupinus albus HOM05D000355 ORTHO05D000227 1.0e-33 147.5 128 61.7
Lalb_Chr10g0107031 Lupinus albus HOM05D000355 ORTHO05D000227 1.1e-32 144.1 143 56.6
Medtr3g052330 Medicago truncatula HOM05D000355 ORTHO05D000227 7.2e-27 124.8 130 53.8
VMungo0647G1125 Vigna mungo HOM05D000355 ORTHO05D000227 9.3e-27 124.4 142 52.1
Ca_14739_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 1.2e-26 124.0 104 63.5
Glyma.14G023100 Glycine max HOM05D000355 ORTHO05D000227 7.9e-26 121.3 137 54.7
Glyma.02G291700 Glycine max HOM05D000355 ORTHO05D000227 3.0e-25 119.4 142 53.5
LjContig00272g0015424 Lotus japonicus HOM05D000355 ORTHO05D000227 5.1e-25 118.6 134 49.3
Phvul.008G268000 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 6.7e-25 118.2 113 54.9
CiPaw.11G190500 Carya illinoinensis HOM05D000355 ORTHO05D000227 3.3e-24 115.9 108 59.3
TPR.G33755 Trifolium pratense HOM05D000355 ORTHO05D000227 2.2e-23 113.2 133 51.9
Haze_09685 Corylus avellana HOM05D000355 ORTHO05D000227 3.7e-23 112.5 122 54.9
QL08p009943 Quercus lobata HOM05D000355 ORTHO05D000227 4.8e-23 112.1 100 59.0
Manes.03G130151 Manihot esculenta HOM05D000355 ORTHO05D000227 6.3e-23 111.7 112 55.4
Manes.15G071100 Manihot esculenta HOM05D000355 ORTHO05D000227 1.8e-22 110.2 141 48.9
MD11G1216500 Malus domestica HOM05D000355 ORTHO05D000227 2.4e-22 109.8 136 47.1
Prupe.4G214900 Prunus persica HOM05D000355 ORTHO05D000227 3.1e-22 109.4 128 48.4
Gohir.D01G067600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 5.9e-21 105.1 113 54.9
Gorai.002G089500 Gossypium raimondii HOM05D000355 ORTHO05D000227 5.9e-21 105.1 113 54.9
MD03G1199600 Malus domestica HOM05D000355 ORTHO05D000227 1.7e-20 103.6 121 49.6
RcHm_v2.0_Chr5g0040191 Rosa chinensis HOM05D000355 ORTHO05D000227 3.8e-20 102.4 127 46.5
Gohir.A01G080400 Gossypium hirsutum HOM05D000355 ORTHO05D000227 6.5e-20 101.7 111 54.1
FAN25G2862 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.4e-19 100.5 126 45.2
CiPaw.12G130300 Carya illinoinensis HOM05D000355 ORTHO05D000227 4.2e-19 99.0 113 50.4
Duzib213G0456 Durio zibethinus HOM05D000355 ORTHO05D000227 4.2e-19 99.0 116 51.7
Duzib170G0673 Durio zibethinus HOM05D000355 ORTHO05D000227 5.5e-19 98.6 116 50.9
Thecc.07G035000 Theobroma cacao HOM05D000355 ORTHO05D000227 5.5e-19 98.6 148 46.6
FAN21G0059 Fragaria x ananassa HOM05D000355 ORTHO05D000227 7.2e-19 98.2 126 44.4
Cfa020334 Carpinus fangiana HOM05D000355 ORTHO05D000227 1.2e-18 97.4 106 55.7
FvH4_3g22890 Fragaria vesca HOM05D000355 ORTHO05D000227 1.6e-18 97.1 126 46.0
FAN11G1364 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.6e-18 97.1 126 46.0
FAN16G3532 Fragaria x ananassa HOM05D000355 ORTHO05D000227 5.1e-17 92.0 113 46.0
SHI26591 Sapria himalayana HOM05D000355 ORTHO05D000227 2.0e-16 90.1 95 48.4
Psat5g178160 Pisum sativum HOM05D000355 ORTHO05D000227 4.8e-15 85.5 120 45.0
TAR626G1504 Trochodendron aralioides HOM05D000355 ORTHO05D000227 4.8e-15 85.5 134 41.8
arahy.Tifrunner.gnm1.ann1.WB5VKA Arachis hypogaea HOM05D000355 ORTHO05D000227 1.8e-14 83.6 111 46.8
Cpa.g.sc12.297 Carica papaya HOM05D000355 ORTHO05D000227 2.4e-14 83.2 109 48.6
Rhsim06G0218100 Rhododendron simsii HOM05D000355 ORTHO05D000227 5.3e-14 82.0 94 46.8
TWI38G0536 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 5.3e-14 82.0 125 43.2
Sopen07g032850 Solanum pennellii HOM05D000355 ORTHO05D000227 1.2e-13 80.9 125 42.4
Nn1g07141 Nelumbo nucifera HOM05D000355 ORTHO05D000227 2.0e-13 80.1 118 43.2
CAN.G337.139 Capsicum annuum HOM05D000355 ORTHO05D000227 5.9e-13 78.6 142 38.0
Nn1g03507 Nelumbo nucifera HOM05D000355 ORTHO05D000227 5.9e-13 78.6 103 45.6
PGR083G1023 Punica granatum HOM05D000355 ORTHO05D000227 7.7e-13 78.2 114 39.5
TAR627G0409 Trochodendron aralioides HOM05D000355 ORTHO05D000227 7.7e-13 78.2 105 42.9
PGSC0003DMG400022315 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.2e-12 76.6 106 41.5
Solyc07g064650.3 Solanum lycopersicum HOM05D000355 ORTHO05D000227 2.9e-12 76.3 109 43.1
TAR624G0087 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.9e-12 76.3 98 42.9
GSVIVG01037661001 Vitis vinifera HOM05D000355 ORTHO05D000227 2.9e-12 76.3 120 43.3
Eucgr.F03472 Eucalyptus grandis HOM05D000355 ORTHO05D000227 3.8e-12 75.9 115 43.5
MSTRG.6925 Avicennia marina HOM05D000355 ORTHO05D000227 8.5e-12 74.7 99 43.4
Gohir.D09G068800 Gossypium hirsutum HOM05D000355 ORTHO05D000227 8.5e-12 74.7 108 46.3
Gorai.006G082900 Gossypium raimondii HOM05D000355 ORTHO05D000227 1.1e-11 74.3 108 46.3
Atru.chr2.3446 Acer truncatum HOM05D000355 ORTHO05D000227 1.4e-11 73.9 126 39.7
CSS0004295 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 1.4e-11 73.9 101 42.6
Aqoxy1G02120 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 1.9e-11 73.6 100 42.0
CSS0044358 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 3.2e-11 72.8 103 42.7
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 4.2e-11 72.4 113 42.5
Peaxi162Scf00235g00024 Petunia axillaris HOM05D000355 ORTHO05D000227 5.5e-11 72.0 102 41.2
Cc05_g13870 Coffea canephora HOM05D000355 ORTHO05D000227 9.4e-11 71.2 102 40.2
Manes.17G038980 Manihot esculenta HOM05D000355 ORTHO05D000227 1.2e-10 70.9 128 37.5
Gohir.A13G137700 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.6e-10 70.5 109 45.0
Gohir.D09G068900 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.6e-10 70.5 156 38.5
Gorai.006G083100 Gossypium raimondii HOM05D000355 ORTHO05D000227 1.6e-10 70.5 156 38.5
Gorai.009G178800 Gossypium raimondii HOM05D000355 ORTHO05D000227 2.1e-10 70.1 87 49.4
Sabra11G0003200 Salix brachista HOM05D000355 ORTHO05D000227 2.1e-10 70.1 124 39.5
arahy.Tifrunner.gnm1.ann1.QG5LTR Arachis hypogaea HOM05D000355 ORTHO05D000227 2.7e-10 69.7 125 37.6
Thecc.06G221000 Theobroma cacao HOM05D000355 ORTHO05D000227 2.7e-10 69.7 119 45.4
Duzib160G0794 Durio zibethinus HOM05D000355 ORTHO05D000227 4.7e-10 68.9 127 40.2
arahy.Tifrunner.gnm1.ann1.3YI7N5 Arachis hypogaea HOM05D000355 ORTHO05D000227 6.1e-10 68.6 55 70.9
Ciclev10009529m.g Citrus clementina HOM05D000355 ORTHO05D000227 6.1e-10 68.6 109 41.3
MSTRG.15144 Avicennia marina HOM05D000355 ORTHO05D000227 7.9e-10 68.2 96 40.6
QL05p073075 Quercus lobata HOM05D000355 ORTHO05D000227 7.9e-10 68.2 121 38.0
ATR0794G099 Amborella trichopoda HOM05D000355 ORTHO05D000227 1.0e-09 67.8 83 48.2
Gohir.D05G173600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.4e-09 67.4 87 48.3
Gohir.A09G068600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.3e-09 66.6 153 35.9
ECA236G2721 Erigeron canadensis HOM05D000593 ORTHO05D000562 3.0e-09 66.2 138 36.2
RcHm_v2.0_Chr5g0002931 Rosa chinensis HOM05D000355 ORTHO05D000227 3.0e-09 66.2 109 40.4
Eucgr.F00753 Eucalyptus grandis HOM05D000355 ORTHO05D000227 5.1e-09 65.5 141 32.6
Gorai.013G159500 Gossypium raimondii HOM05D000355 ORTHO05D000227 5.1e-09 65.5 109 44.0
Gohir.A05G170500 Gossypium hirsutum HOM05D000355 ORTHO05D000227 6.7e-09 65.1 83 48.2
Manes.16G006800 Manihot esculenta HOM05D000355 ORTHO05D000227 6.7e-09 65.1 126 38.1
ClCG09G010840 Citrullus lanatus HOM05D000355 ORTHO05D000227 8.8e-09 64.7 120 33.3
DCAR_022567 Daucus carota HOM05D000355 ORTHO05D000227 8.8e-09 64.7 114 40.4
HanXRQChr11g0337281 Helianthus annuus HOM05D000355 ORTHO05D000227 8.8e-09 64.7 115 40.9
CiPaw.09G092300 Carya illinoinensis HOM05D000355 ORTHO05D000227 1.1e-08 64.3 119 38.7
Duzib192G0607 Durio zibethinus HOM05D000355 ORTHO05D000227 1.1e-08 64.3 127 39.4
Duzib235G0910 Durio zibethinus HOM05D000355 ORTHO05D000227 1.1e-08 64.3 123 39.8
Gohir.D13G142700 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.5e-08 63.9 107 43.0
Nitab4.5_0003495g0040 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.5e-08 63.9 90 40.0
Oeu041815.1 Olea europaea HOM05D000355 ORTHO05D000227 1.5e-08 63.9 87 37.9
Ciclev10009734m.g Citrus clementina HOM05D000355 ORTHO05D000227 2.6e-08 63.2 95 46.3
TWI63G0422 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 2.6e-08 63.2 87 40.2
Potri.004G014000 Populus trichocarpa HOM05D000355 ORTHO05D000227 4.4e-08 62.4 124 37.9
EL10Ac4g07797 Beta vulgaris HOM05D000355 ORTHO05D000227 5.7e-08 62.0 109 36.7
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 5.7e-08 62.0 134 34.3
AUR62020432 Chenopodium quinoa HOM05D000355 ORTHO05D000227 5.7e-08 62.0 151 31.8
Potri.011G004100 Populus trichocarpa HOM05D000355 ORTHO05D000227 5.7e-08 62.0 123 35.8
TWI38G0396 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 7.4e-08 61.6 104 38.5
vmacro09705 Vaccinium macrocarpon HOM05D000355 ORTHO05D000227 7.4e-08 61.6 120 38.3
Dinv20055 Davidia involucrata HOM05D000355 ORTHO05D000227 1.3e-07 60.8 119 37.8
Dinv40763 Davidia involucrata HOM05D000355 ORTHO05D000227 1.7e-07 60.5 96 40.6
Sabra04G0006900 Salix brachista HOM05D000316 ORTHO05D000227 2.8e-07 59.7 121 40.5
RhsimUnG0249700 Rhododendron simsii HOM05D000355 ORTHO05D000227 3.7e-07 59.3 88 38.6
Gohir.A09G068650 Gossypium hirsutum HOM05D000355 ORTHO05D000227 4.8e-07 58.9 119 37.0
Ah.04g165950 Amaranthus hybridus HOM05D000355 ORTHO05D000227 6.3e-07 58.5 86 37.2
Carub.0007s1392 Capsella rubella HOM05D000355 ORTHO05D000227 6.3e-07 58.5 113 35.4
Hma1.2p1_0091F.1_g046420 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 6.3e-07 58.5 111 36.0
BcaC06g32720 Brassica carinata HOM05D000355 ORTHO05D000227 8.2e-07 58.2 97 34.0
AL7G25890 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 1.1e-06 57.8 107 37.4
Glyma.07G260700 Glycine max HOM05D000355 ORTHO05D000227 1.4e-06 57.4 107 37.4
A03p56980 Brassica napus HOM05D000355 ORTHO05D000227 1.8e-06 57.0 102 34.3
Aa31LG5G12030 Aethionema arabicum HOM05D000355 ORTHO05D000227 2.4e-06 56.6 97 34.0
CSS0039394 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 3.1e-06 56.2 90 37.8
Hma1.2p1_0738F.1_g211100 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 3.1e-06 56.2 128 31.2
Hma1.2p1_2518F.1_g323770 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 3.1e-06 56.2 128 31.2
Peaxi162Scf00834g00013 Petunia axillaris HOM05D000355 ORTHO05D000227 3.1e-06 56.2 107 34.6
BolC7t46004H Brassica oleracea HOM05D000355 ORTHO05D000227 4.1e-06 55.8 102 33.3
Ca_00664_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 5.3e-06 55.5 111 31.5
Ca_30194_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 5.3e-06 55.5 111 31.5
FAN25G1886 Fragaria x ananassa HOM05D000355 ORTHO05D000227 5.3e-06 55.5 115 35.7
Lsat_1_v5_gn_7_109900 Lactuca sativa HOM05D000355 ORTHO05D000227 5.3e-06 55.5 136 30.9
AT4G26950 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 7.0e-06 55.1 106 36.8
C07p55090 Brassica napus HOM05D000355 ORTHO05D000227 9.1e-06 54.7 102 33.3
Thhalv10027587m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 9.1e-06 54.7 93 34.4
Hma1.2p1_1804F.1_g303090 Hydrangea macrophylla HOM05D052000 ORTHO05D000227 9.1e-06 54.7 140 35.7


User provided reference genes

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