Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 2.4e-87 325.5 162 100.0
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 3.7e-64 248.4 130 93.8
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 3.5e-59 231.9 136 81.6
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 2.3e-58 229.2 146 81.5
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 6.7e-58 227.6 132 83.3
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 8.7e-58 227.3 133 82.7
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 8.7e-58 227.3 129 84.5
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 8.7e-58 227.3 136 80.1
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 8.7e-58 227.3 136 80.1
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 1.1e-57 226.9 136 79.4
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 1.5e-57 226.5 136 80.1
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 1.9e-57 226.1 120 87.5
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 1.9e-57 226.1 129 83.7
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 1.9e-57 226.1 132 81.1
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 2.5e-57 225.7 132 82.6
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 2.5e-57 225.7 132 82.6
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 2.5e-57 225.7 129 83.7
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 3.3e-57 225.3 120 86.7
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 3.3e-57 225.3 130 82.3
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 4.3e-57 224.9 122 87.7
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 4.3e-57 224.9 129 82.9
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 4.3e-57 224.9 122 87.7
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 5.7e-57 224.6 129 82.9
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 5.7e-57 224.6 120 88.3
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 7.4e-57 224.2 121 86.8
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 7.4e-57 224.2 132 81.8
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 9.6e-57 223.8 136 77.9
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 1.3e-56 223.4 121 87.6
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 2.8e-56 222.2 129 82.9
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 3.7e-56 221.9 139 77.0
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 3.7e-56 221.9 129 82.9
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 4.8e-56 221.5 133 80.5
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 8.2e-56 220.7 137 80.3
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 8.2e-56 220.7 137 80.3
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 8.2e-56 220.7 137 80.3
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 1.1e-55 220.3 120 87.5
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 1.1e-55 220.3 129 81.4
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 1.4e-55 219.9 124 83.9
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 1.4e-55 219.9 114 87.7
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 1.4e-55 219.9 129 80.6
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 1.8e-55 219.5 134 80.6
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 1.8e-55 219.5 134 80.6
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 2.4e-55 219.2 114 88.6
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 2.4e-55 219.2 114 88.6
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 3.1e-55 218.8 114 88.6
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 4.1e-55 218.4 114 87.7
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 4.1e-55 218.4 118 83.9
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 4.1e-55 218.4 118 83.9
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 4.1e-55 218.4 127 81.9
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 5.3e-55 218.0 130 81.5
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 6.9e-55 217.6 129 79.1
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 6.9e-55 217.6 129 79.1
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 6.9e-55 217.6 126 82.5
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 1.2e-54 216.9 118 83.9
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 1.2e-54 216.9 137 78.1
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 1.5e-54 216.5 114 87.7
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 1.5e-54 216.5 114 87.7
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 1.5e-54 216.5 129 79.1
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 2.0e-54 216.1 114 87.7
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 2.0e-54 216.1 114 87.7
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 2.0e-54 216.1 115 85.2
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 2.0e-54 216.1 117 86.3
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 2.6e-54 215.7 131 80.2
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 3.4e-54 215.3 127 77.2
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 3.4e-54 215.3 129 78.3
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.4e-54 215.3 129 79.1
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.4e-54 215.3 129 79.1
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 4.5e-54 214.9 129 81.4
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 4.5e-54 214.9 121 86.0
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 1.7e-53 213.0 141 71.6
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 2.2e-53 212.6 120 80.8
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 2.9e-53 212.2 120 84.2
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 3.8e-53 211.8 128 77.3
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 6.5e-53 211.1 118 83.9
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 6.5e-53 211.1 128 75.8
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 1.1e-52 210.3 120 80.0
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 1.9e-52 209.5 132 76.5
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 2.5e-52 209.1 122 78.7
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 4.2e-52 208.4 129 76.7
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 9.3e-52 207.2 131 76.3
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 1.6e-51 206.5 120 79.2
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 2.1e-51 206.1 120 81.7
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 4.6e-51 204.9 118 83.9
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 1.0e-50 203.8 133 75.2
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 3.9e-50 201.8 120 80.8
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 5.1e-50 201.4 129 76.7
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 4.3e-49 198.4 133 72.9
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 1.3e-48 196.8 133 72.2
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 2.8e-48 195.7 117 79.5
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 4.8e-48 194.9 117 79.5
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 1.1e-47 193.7 122 73.8
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 1.1e-47 193.7 122 73.8
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 1.8e-47 193.0 115 79.1
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 3.1e-47 192.2 129 72.9
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 6.9e-47 191.0 129 70.5
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 9.0e-47 190.7 119 77.3
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 2.9e-45 185.7 111 78.4
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 2.9e-45 185.7 116 75.0
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.8e-45 185.3 129 70.5
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 3.8e-45 185.3 120 71.7
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 6.5e-45 184.5 127 73.2
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 8.5e-45 184.1 105 81.0
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 1.8e-42 176.4 91 90.1
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 9.1e-39 164.1 109 67.0
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 6.3e-24 114.8 70 77.1
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 1.3e-21 107.1 138 50.0
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 3.7e-08 62.4 94 37.2


User provided reference genes

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