Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.1e-86 323.2 159 100.0
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.7e-61 239.6 162 77.8
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.1e-57 226.9 163 74.8
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 1.4e-52 209.9 167 69.5
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 5.0e-50 201.4 166 66.3
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 2.6e-46 189.1 161 65.2
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.7e-37 159.8 154 58.4
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 7.1e-36 154.5 164 57.3
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 6.0e-35 151.4 162 56.2
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 7.8e-35 151.0 154 55.2
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 6.6e-34 147.9 162 55.6
Lj5g0011924 Lotus japonicus HOM05D007935 ORTHO05D007393 9.9e-30 134.0 169 52.7
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.2e-27 127.1 164 49.4
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 2.7e-27 125.9 159 45.9
Phvul.007G090200 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 2.3e-26 122.9 153 51.0
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.1e-26 121.7 168 47.0
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 1.9e-25 119.8 157 43.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 7.3e-25 117.9 172 45.3
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 7.3e-25 117.9 159 45.9
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.2e-22 110.5 159 47.2
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 8.4e-21 104.4 159 42.1
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 7.1e-20 101.3 160 40.6
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.2e-19 100.5 163 41.7
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.5e-19 99.0 171 40.4
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 2.3e-18 96.3 159 40.9
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 3.0e-18 95.9 166 38.6
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 3.9e-18 95.5 167 38.9
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.9e-18 95.5 173 37.6
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 5.1e-18 95.1 158 41.8
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 6.6e-18 94.7 167 38.9
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 6.6e-18 94.7 178 40.4
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 7.3e-17 91.3 182 34.6
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 7.3e-17 91.3 175 37.1
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 3.6e-16 89.0 137 37.2
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 3.6e-16 89.0 163 36.2
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 3.6e-16 89.0 157 38.9
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 8.1e-16 87.8 180 36.1
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.4e-15 86.3 170 34.7
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.1e-15 85.9 171 36.8
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 4.0e-15 85.5 170 36.5
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 5.3e-15 85.1 171 32.7
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 5.3e-15 85.1 170 34.7
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 2.6e-14 82.8 175 37.1
Carub.0002s1869 Capsella rubella HOM05D010479 ORTHO05D007393 3.4e-14 82.4 174 37.4
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.2e-13 79.7 168 33.3
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 3.8e-13 79.0 157 35.7
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.9e-13 78.6 167 37.1
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 1.1e-12 77.4 175 32.0
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.1e-12 77.4 152 32.2
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.4e-12 77.0 165 36.4
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 1.4e-12 77.0 152 31.6
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 4.2e-12 75.5 157 31.8
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 9.3e-12 74.3 162 35.2
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-11 73.9 185 29.7
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.2e-11 73.9 155 33.5
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.1e-11 73.2 159 34.0
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 3.5e-11 72.4 169 32.0
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 3.5e-11 72.4 169 32.0
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 7.9e-11 71.2 161 34.2
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 7.9e-11 71.2 175 35.4
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 1.3e-10 70.5 148 34.5
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 1.7e-10 70.1 151 35.1
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 5.1e-10 68.6 190 28.4
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 5.1e-10 68.6 167 32.9
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 5.1e-10 68.6 154 29.2
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 8.7e-10 67.8 168 34.5
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 8.7e-10 67.8 152 30.3
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 8.7e-10 67.8 173 32.4
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 1.1e-09 67.4 166 33.1
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 1.1e-09 67.4 162 33.3
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.5e-09 67.0 206 29.6
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 1.9e-09 66.6 166 28.3
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 2.5e-09 66.2 167 35.3
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 2.5e-09 66.2 167 35.3
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 2.5e-09 66.2 176 35.2
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 3.3e-09 65.9 91 44.0
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 7.3e-09 64.7 161 34.8
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 7.3e-09 64.7 168 35.7
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 9.6e-09 64.3 175 32.6
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 9.6e-09 64.3 161 34.8
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 1.6e-08 63.5 156 32.7
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 2.8e-08 62.8 161 32.9
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 3.6e-08 62.4 140 35.0
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 6.2e-08 61.6 98 43.9
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 6.2e-08 61.6 172 31.4
CsaV3_2G033460 Cucumis sativus L. HOM05D030816 ORTHO05D028878 6.2e-08 61.6 151 33.1
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 6.2e-08 61.6 166 33.7
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 8.1e-08 61.2 161 31.7
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 1.1e-07 60.8 157 35.7
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 1.4e-07 60.5 165 33.3
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 1.4e-07 60.5 165 33.3
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 2.4e-07 59.7 157 34.4
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 2.4e-07 59.7 166 32.5
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 4.0e-07 58.9 166 30.1
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 4.0e-07 58.9 180 27.8
MELO3C008117.2 Cucumis melo HOM05D030816 ORTHO05D028878 6.9e-07 58.2 151 31.8
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 6.9e-07 58.2 170 28.8
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 9.0e-07 57.8 151 33.1
SGA_v2.0_scaffold118G32471 Striga asiatica HOM05D007935 ORTHO05D007393 9.0e-07 57.8 157 31.8
BcaB03g15625 Brassica carinata HOM05D010479 ORTHO05D007393 1.2e-06 57.4 88 43.2
BcaB05g24691 Brassica carinata HOM05D010479 ORTHO05D007393 1.2e-06 57.4 159 32.1
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 1.5e-06 57.0 88 42.0
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 3.4e-06 55.8 108 37.0
Potri.T045901 Populus trichocarpa HOM05D009958 ORTHO05D007393 3.4e-06 55.8 174 29.3
BcaB03g14910 Brassica carinata HOM05D010479 ORTHO05D007393 5.8e-06 55.1 95 42.1
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 5.8e-06 55.1 88 40.9
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 9.9e-06 54.3 149 29.5
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 9.9e-06 54.3 108 36.1


User provided reference genes

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