Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 1.0e-42 176.4 94 100.0
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 2.5e-33 145.2 95 86.3
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 1.3e-32 142.9 81 87.7
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 6.9e-31 137.1 98 81.6
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 1.1e-20 103.2 95 63.2
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 5.5e-20 100.9 97 63.9
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.1e-15 85.1 99 52.5
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 9.0e-15 83.6 93 50.5
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 2.6e-14 82.0 99 51.5
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 5.9e-14 80.9 99 51.5
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 7.7e-14 80.5 100 51.0
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 2.2e-13 79.0 100 49.0
Medtr6g033505 Medicago truncatula HOM05D008287 ORTHO05D010110 2.2e-13 79.0 94 52.1
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 2.2e-13 79.0 91 45.1
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 3.8e-13 78.2 95 45.3
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 6.5e-13 77.4 101 45.5
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.1e-12 76.6 87 49.4
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 1.9e-12 75.9 87 48.3
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 2.5e-12 75.5 84 47.6
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 4.2e-12 74.7 95 48.4
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 4.2e-12 74.7 91 50.5
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 7.2e-12 73.9 98 49.0
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 9.4e-12 73.6 95 47.4
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 9.4e-12 73.6 91 45.1
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 9.4e-12 73.6 86 51.2
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.2e-11 73.2 93 45.2
arahy.Tifrunner.gnm1.ann1.LAB5TB Arachis hypogaea HOM05D008287 ORTHO05D010110 1.6e-11 72.8 95 48.4
arahy.Tifrunner.gnm1.ann1.7IIA7U Arachis hypogaea HOM05D008287 ORTHO05D010110 2.1e-11 72.4 95 48.4
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 7.9e-11 70.5 96 43.8
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 1.4e-10 69.7 86 44.2
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 2.3e-10 68.9 85 47.1
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 2.3e-10 68.9 81 45.7
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 3.9e-10 68.2 86 44.2
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 6.7e-10 67.4 89 48.3
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 6.7e-10 67.4 81 44.4
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 1.1e-09 66.6 81 44.4
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 1.5e-09 66.2 83 44.6
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 1.5e-09 66.2 60 53.3
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 2.0e-09 65.9 81 45.7
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 2.5e-09 65.5 84 47.6
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 3.3e-09 65.1 97 44.3
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 4.3e-09 64.7 95 42.1
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 2.8e-08 62.0 99 43.4
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 6.3e-08 60.8 92 42.4
AT5G49015 Arabidopsis thaliana HOM05D013386 ORTHO05D010110 1.1e-07 60.1 93 46.2
Cc06_g14360 Coffea canephora HOM05D008287 ORTHO05D010110 1.4e-07 59.7 110 41.8
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 3.1e-07 58.5 83 37.3
CARHR286230 Cardamine hirsuta HOM05D013386 ORTHO05D010110 1.2e-06 56.6 93 44.1
AL8G22370 Arabidopsis lyrata HOM05D013386 ORTHO05D010110 2.0e-06 55.8 93 44.1
Carub.0008s0883 Capsella rubella HOM05D013386 ORTHO05D010110 2.6e-06 55.5 91 46.2
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 5.9e-06 54.3 81 34.6
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 7.7e-06 53.9 36 63.9


User provided reference genes

Program Settings