Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G078000 Phaseolus vulgaris HOM05D004773 ORTHO05D005943 1.4e-170 602.8 290 100.0
Glyma.16G151100 Glycine max HOM05D004773 ORTHO05D005943 6.9e-130 467.6 273 83.5
Lj2g0008141 Lotus japonicus HOM05D004773 ORTHO05D005943 1.3e-123 446.8 272 80.1
Ca_04503_v3 Cicer arietinum L. HOM05D004773 ORTHO05D005943 2.1e-123 446.0 272 79.8
Lalb_Chr06g0173871 Lupinus albus HOM05D004773 ORTHO05D005943 7.6e-121 437.6 273 78.4
Medtr6g033025 Medicago truncatula HOM05D004773 ORTHO05D005943 9.9e-121 437.2 273 77.3
Psat1g096800 Pisum sativum HOM05D004773 ORTHO05D005943 2.7e-118 429.1 273 78.4
arahy.Tifrunner.gnm1.ann1.WJU3K5 Arachis hypogaea HOM05D004773 ORTHO05D005943 7.4e-116 421.0 274 73.4
MD15G1141100 Malus domestica HOM05D004773 ORTHO05D005943 1.1e-111 407.1 287 67.6
Manes.08G158200 Manihot esculenta HOM05D004773 ORTHO05D005943 2.7e-110 402.5 273 70.3
Ciclev10032178m.g Citrus clementina HOM05D004773 ORTHO05D005943 1.5e-108 396.7 273 69.6
Lj1P1212T41 Lonicera japonica HOM05D004773 ORTHO05D005943 2.5e-108 396.0 274 69.0
QL09p005927 Quercus lobata HOM05D004773 ORTHO05D005943 1.1e-106 390.6 288 66.7
CsaV3_3G010040 Cucumis sativus L. HOM05D004773 ORTHO05D005943 4.1e-106 388.7 272 69.5
AL6G28660 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 9.0e-106 387.5 274 67.2
Atru.chr2.1725 Acer truncatum HOM05D004773 ORTHO05D005943 1.2e-105 387.1 273 68.1
CiPaw.05G210200 Carya illinoinensis HOM05D004773 ORTHO05D005943 3.4e-105 385.6 286 66.4
Carub.0006s1581 Capsella rubella HOM05D004773 ORTHO05D005943 4.5e-105 385.2 274 67.9
MELO3C006226.2 Cucumis melo HOM05D004773 ORTHO05D005943 5.9e-105 384.8 272 69.1
BcaB08g36761 Brassica carinata HOM05D004773 ORTHO05D005943 1.0e-104 384.0 273 68.9
Sed0007971 Sechium edule HOM05D004773 ORTHO05D005943 1.3e-104 383.6 272 67.6
Hund21271 Selenicereus undatus HOM05D004773 ORTHO05D005943 1.3e-104 383.6 273 67.8
Cfa016123 Carpinus fangiana HOM05D004773 ORTHO05D005943 1.7e-104 383.3 287 65.9
Thhalv10014121m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 3.8e-104 382.1 272 68.4
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 3.8e-104 382.1 274 66.1
AUR62014736 Chenopodium quinoa HOM05D004773 ORTHO05D005943 6.5e-104 381.3 282 64.2
AT5G17570 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 8.5e-104 380.9 274 66.8
A10p21830 Brassica napus HOM05D004773 ORTHO05D008759 1.1e-103 380.6 273 67.4
Duzib128G1941 Durio zibethinus HOM05D004773 ORTHO05D005943 1.9e-103 379.8 273 67.0
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 3.2e-103 379.0 273 66.7
Aqoxy5G04203 Aquilegia oxysepala HOM05D004773 ORTHO05D005943 5.5e-103 378.3 273 66.7
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 5.5e-103 378.3 273 65.9
C09p59580 Brassica napus HOM05D004773 ORTHO05D005943 9.3e-103 377.5 273 67.4
BcaC04g18778 Brassica carinata HOM05D004773 ORTHO05D005943 2.1e-102 376.3 273 67.0
BolC9t58797H Brassica oleracea HOM05D004773 ORTHO05D005943 2.1e-102 376.3 273 67.0
Sp6g26650 Schrenkiella parvula HOM05D004773 ORTHO05D005943 2.1e-102 376.3 273 67.8
Haze_00339 Corylus avellana HOM05D004773 ORTHO05D005943 2.7e-102 375.9 287 65.2
Prupe.7G272000 Prunus persica HOM05D004773 ORTHO05D005943 3.6e-102 375.6 274 66.1
MBI04_g12483_MAGBIO Magnolia biondii HOM05D004773 ORTHO05D005943 6.1e-102 374.8 273 66.3
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 6.1e-102 374.8 273 65.2
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 7.9e-102 374.4 276 65.6
Gorai.007G248200 Gossypium raimondii HOM05D004773 ORTHO05D005943 1.0e-101 374.0 273 64.8
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 1.3e-101 373.6 273 65.9
Gohir.D11G235500 Gossypium hirsutum HOM05D004773 ORTHO05D005943 2.3e-101 372.9 274 64.2
Oeu053928.1 Olea europaea HOM05D004773 ORTHO05D005943 2.3e-101 372.9 274 64.2
vmacro15870 Vaccinium macrocarpon HOM05D004773 ORTHO05D005943 6.7e-101 371.3 274 65.0
Actinidia11804 Actinidia chinensis HOM05D004773 ORTHO05D005943 5.7e-100 368.2 274 63.9
CDE07G0301 Ceratophyllum demersum HOM05D004773 ORTHO05D005943 9.7e-100 367.5 281 63.7
Rhsim02G0120400 Rhododendron simsii HOM05D000873 ORTHO05D002948 2.2e-99 366.3 274 64.2
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 4.8e-99 365.2 273 64.5
Aa31LG11G12090 Aethionema arabicum HOM05D004773 ORTHO05D005943 1.4e-98 363.6 273 65.9
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 3.1e-98 362.5 273 65.2
ECA234G3816 Erigeron canadensis HOM05D004773 ORTHO05D005943 5.3e-98 361.7 274 63.9
ClCG05G002600 Citrullus lanatus HOM05D004773 ORTHO05D005943 1.2e-97 360.5 320 58.1
HanXRQChr17g0555701 Helianthus annuus HOM05D004773 ORTHO05D005943 1.5e-97 360.1 273 63.4
TWI32G1059 Tripterygium wilfordii HOM05D004773 ORTHO05D005943 2.6e-97 359.4 273 66.3
Nn2g15176 Nelumbo nucifera HOM05D004773 ORTHO05D005943 5.9e-97 358.2 272 62.5
Nitab4.5_0003676g0020 Nicotiana tabacum HOM05D004773 ORTHO05D005943 1.0e-96 357.5 275 61.8
Sopen02g023790 Solanum pennellii HOM05D004773 ORTHO05D005943 1.7e-96 356.7 274 62.8
Peaxi162Scf00527g00065 Petunia axillaris HOM05D004773 ORTHO05D005943 2.2e-96 356.3 278 62.6
DCAR_024890 Daucus carota HOM05D004773 ORTHO05D005943 2.9e-96 355.9 273 61.5
CAN.G1181.18 Capsicum annuum HOM05D004773 ORTHO05D005943 5.0e-96 355.1 273 62.6
Solyc02g078980.3 Solanum lycopersicum HOM05D004773 ORTHO05D005943 8.5e-96 354.4 274 62.4
Nitab4.5_0005399g0010 Nicotiana tabacum HOM05D004773 ORTHO05D005943 1.9e-95 353.2 275 61.8
arahy.Tifrunner.gnm1.ann1.KNV4WG Arachis hypogaea HOM05D004773 ORTHO05D005943 7.2e-95 351.3 274 62.4
Cc02_g12570 Coffea canephora HOM05D004773 ORTHO05D005943 2.1e-94 349.7 277 61.0
MSTRG.7300 Avicennia marina HOM05D004773 ORTHO05D005943 2.7e-94 349.4 274 62.4
PGSC0003DMG400022363 Solanum tuberosum HOM05D004773 ORTHO05D005943 1.4e-93 347.1 277 60.6
Hma1.2p1_0144F.1_g064840 Hydrangea macrophylla HOM05D004773 ORTHO05D005943 2.3e-93 346.3 274 60.9
ATR0620G003 Amborella trichopoda HOM05D004773 ORTHO05D005943 5.1e-93 345.1 272 62.9
PSO063G3794 Papaver somniferum HOM05D004773 ORTHO05D005943 5.1e-93 345.1 275 62.9
PGR102G2546 Punica granatum HOM05D004773 ORTHO05D005943 8.8e-93 344.4 272 60.7
SalBow8G5056 Salvia bowleyana HOM05D004773 ORTHO05D005943 8.8e-93 344.4 273 63.4
CANSAT01G2664 Cannabis sativa HOM05D004773 ORTHO05D005943 3.3e-92 342.4 274 62.0
Gohir.A11G222000 Gossypium hirsutum HOM05D004773 ORTHO05D005943 9.7e-92 340.9 232 67.2
Lsat_1_v5_gn_4_57340 Lactuca sativa HOM05D004773 ORTHO05D005943 9.7e-92 340.9 274 59.1
Migut.M01200 Erythranthe guttata HOM05D004773 ORTHO05D005943 1.7e-91 340.1 273 61.5
Eucgr.F01970 Eucalyptus grandis HOM05D004773 ORTHO05D005943 2.8e-91 339.3 273 59.7
CARHR195610 Cardamine hirsuta HOM05D004773 ORTHO05D005943 1.8e-90 336.7 233 69.5
GSVIVG01019376001 Vitis vinifera HOM05D004773 ORTHO05D005943 2.4e-90 336.3 255 62.4
HanXRQChr12g0364651 Helianthus annuus HOM05D004773 ORTHO05D005943 5.3e-90 335.1 274 59.9
TPR.G6097 Trifolium pratense HOM05D004773 ORTHO05D005943 2.6e-89 332.8 277 62.8
Eucgr.F01964 Eucalyptus grandis HOM05D004773 ORTHO05D005943 5.9e-89 331.6 272 58.1
Os04g0577500 Oryza sativa ssp. japonica HOM05D004773 ORTHO05D005943 1.3e-88 330.5 274 60.6
AUR62012595 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.9e-87 326.6 232 64.7
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.9e-87 326.6 232 69.8
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 2.5e-87 326.2 232 69.8
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.5e-87 326.2 232 69.8
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.4e-87 324.3 232 69.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.4e-87 324.3 232 69.4
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.7e-86 322.8 232 69.0
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.7e-86 322.8 232 69.0
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.6e-86 322.4 232 69.0
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 7.9e-86 321.2 232 68.5
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-85 320.9 232 68.5
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 1.0e-85 320.9 234 62.8
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 1.8e-85 320.1 289 55.0
HPP92_001431 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.5e-84 317.0 279 56.6
Cc02_g14730 Coffea canephora HOM05D004773 ORTHO05D005943 1.7e-83 313.5 274 55.5
HPP92_001439 Vanilla planifolia HOM05D004773 ORTHO05D005943 1.7e-83 313.5 279 56.3
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.8e-83 312.8 232 67.7
ECA234G0571 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.6e-81 307.0 267 55.1
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 2.5e-79 299.7 230 59.6
Gohir.D13G163600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.6e-78 297.0 239 58.2
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 6.1e-78 295.0 231 58.9
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 1.4e-77 293.9 275 53.8
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.8e-77 293.5 207 69.1
SHI39094 Sapria himalayana HOM05D004773 ORTHO05D005943 2.3e-77 293.1 318 47.8
Gohir.A13G158600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 6.7e-77 291.6 230 58.7
AUR62014585 Chenopodium quinoa HOM05D004773 ORTHO05D005943 2.0e-76 290.0 273 54.2
AL3G12620 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 4.8e-75 285.4 218 59.6
Carub.0003s0264 Capsella rubella HOM05D004773 ORTHO05D005943 6.3e-75 285.0 218 59.2
PSO063G1994 Papaver somniferum HOM05D004773 ORTHO05D005943 6.3e-75 285.0 215 60.0
Gorai.013G199600 Gossypium raimondii HOM05D004773 ORTHO05D005943 1.1e-74 284.3 239 56.5
PSO782G1422 Papaver somniferum HOM05D004773 ORTHO05D005943 3.1e-74 282.7 182 70.9
VMungo0464G1467 Vigna mungo HOM05D004773 ORTHO05D005943 2.7e-73 279.6 170 78.2
Aa31LG5G14030 Aethionema arabicum HOM05D004773 ORTHO05D005943 7.7e-73 278.1 215 58.1
Pp3c12_11300 Physcomitrium patens HOM05D004773 ORTHO05D005943 1.0e-72 277.7 270 47.0
A06p26410 Brassica napus HOM05D004773 ORTHO05D005943 1.7e-72 276.9 218 58.3
BNapus_Darmor_BZH_scaffold_78p00160 Brassica napus HOM05D004773 ORTHO05D005943 1.7e-72 276.9 218 58.3
SMO367G0365 Selaginella moellendorffii HOM05D004773 ORTHO05D005943 5.0e-72 275.4 257 52.1
Mapoly0004s0110 Marchantia polymorpha HOM05D004773 ORTHO05D005943 1.9e-71 273.5 272 51.1
BNapus_Darmor_BZH_scaffold_162p00180 Brassica napus HOM05D004773 ORTHO05D005943 4.2e-71 272.3 219 58.0
BolC1t05828H Brassica oleracea HOM05D004773 ORTHO05D005943 4.2e-71 272.3 219 58.0
BraA01t04577Z Brassica rapa HOM05D004773 ORTHO05D005943 5.5e-71 271.9 220 57.7
AT3G03500 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 3.0e-69 266.2 198 60.6
BcaC09g47749 Brassica carinata HOM05D004773 ORTHO05D005943 2.6e-68 263.1 244 51.6
AUR62014597 Chenopodium quinoa HOM05D004773 ORTHO05D005943 5.7e-68 261.9 216 57.4
AagrBONN_evm.TU.Sc2ySwM_362.2127 Anthoceros agrestis HOM05D004773 ORTHO05D005943 9.8e-68 261.2 217 54.8
Dinv40507 Davidia involucrata HOM05D004773 ORTHO05D005943 9.8e-68 261.2 274 52.6
CBR_g32162 Chara braunii HOM05D004773 ORTHO05D001111 2.7e-65 253.1 277 50.2
Thhalv10021316m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 2.9e-56 223.0 169 59.2
VMungo0464G0773 Vigna mungo HOM05D004773 ORTHO05D005943 8.9e-53 211.5 128 84.4
unitig_37.g12340 Utricularia gibba HOM05D004773 ORTHO05D005943 1.2e-52 211.1 149 62.4
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 3.0e-48 196.4 230 47.8
COL.COLO4_31150 Corchorus olitorius HOM05D004773 ORTHO05D005943 1.9e-47 193.7 144 57.6
Sp3g02490 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.1e-39 167.9 325 34.5
CAN.G1247.2 Capsicum annuum HOM05D004773 ORTHO05D005943 8.9e-37 158.3 254 36.2
RcHm_v2.0_Chr3g0466941 Rosa chinensis HOM05D004773 ORTHO05D005943 2.9e-27 126.7 86 74.4
SEGI_00738 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 8.6e-24 115.2 131 48.9
PRCOL_00005876 Prasinoderma coloniale HOM05D004773 ORTHO05D005943 2.1e-22 110.5 272 30.1
Cre17.g717200 Chlamydomonas reinhardtii HOM05D004773 ORTHO05D005943 5.2e-21 105.9 262 30.5
HPP92_010162 Vanilla planifolia HOM05D004773 ORTHO05D005943 2.6e-20 103.6 77 55.8
MCO10G115 Micromonas commoda HOM05D004773 ORTHO05D005943 4.9e-19 99.4 162 34.0
TPR.G35071 Trifolium pratense HOM05D004773 ORTHO05D005943 5.4e-18 95.9 52 84.6
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 3.5e-17 93.2 223 27.8
AL6G10940 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 3.0e-16 90.1 72 55.6
PGSC0003DMG400004239 Solanum tuberosum HOM05D004773 ORTHO05D005943 1.5e-15 87.8 51 64.7
Glyma.16G150900 Glycine max HOM05D004773 ORTHO05D005943 2.1e-14 84.0 61 73.8
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 5.4e-10 69.3 218 29.8
Glyma.09G113200 Glycine max HOM05D004773 ORTHO05D005943 9.3e-10 68.6 59 52.5
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 1.0e-08 65.1 214 24.3
SEGI_31644 Sequoiadendron giganteum HOM05D004773 ORTHO05D005943 1.0e-08 65.1 53 50.9
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 1.3e-08 64.7 214 28.0
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 2.3e-08 63.9 216 28.2
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 2.3e-08 63.9 162 30.9
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 5.1e-08 62.8 241 25.7
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 8.7e-08 62.0 193 31.1
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 1.1e-07 61.6 215 25.6
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 4.3e-07 59.7 120 35.0
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 1.3e-06 58.2 203 27.1
AL3G13200 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 3.7e-06 56.6 49 46.9


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