Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 8.3e-137 490.3 242 100.0
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 2.3e-126 455.7 242 92.1
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 5.4e-112 407.9 242 82.6
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 2.6e-106 389.0 252 79.4
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 4.1e-104 381.7 244 81.1
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 4.3e-101 371.7 250 76.4
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 1.6e-100 369.8 253 75.5
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 1.3e-94 350.1 236 76.3
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 1.7e-94 349.7 235 76.2
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 3.9e-94 348.6 246 72.0
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 1.1e-93 347.1 243 72.0
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 1.1e-93 347.1 243 72.0
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 9.6e-93 344.0 243 72.0
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 9.6e-93 344.0 243 72.0
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 9.6e-93 344.0 243 72.0
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 9.6e-93 344.0 245 71.8
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.2e-92 343.6 243 71.6
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 1.2e-92 343.6 242 71.5
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.6e-92 343.2 243 71.6
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 1.6e-92 343.2 242 71.5
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 2.8e-92 342.4 243 72.8
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 2.8e-92 342.4 242 70.2
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 1.8e-91 339.7 242 72.7
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 1.8e-91 339.7 242 71.9
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 2.4e-91 339.3 242 71.9
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 3.1e-91 339.0 242 71.9
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 6.8e-91 337.8 228 75.0
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 1.2e-90 337.0 242 71.9
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 1.2e-90 337.0 242 70.7
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 1.5e-90 336.7 243 73.3
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 1.5e-90 336.7 244 72.5
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 3.4e-90 335.5 244 70.9
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 4.9e-89 331.6 243 70.0
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 8.4e-89 330.9 243 72.8
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.9e-88 329.7 244 70.5
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 3.2e-88 328.9 242 67.8
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 4.2e-88 328.6 243 70.4
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 2.7e-87 325.9 243 70.0
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 2.7e-87 325.9 243 68.3
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 3.5e-87 325.5 247 69.2
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 3.5e-87 325.5 243 70.8
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 4.6e-87 325.1 245 67.8
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 7.8e-87 324.3 244 70.9
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 1.0e-86 323.9 249 69.1
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 2.3e-86 322.8 249 68.7
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 1.1e-85 320.5 242 68.6
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 1.9e-85 319.7 246 67.9
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 2.5e-85 319.3 243 68.7
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 3.3e-85 318.9 198 77.8
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 5.6e-85 318.2 245 70.6
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 5.6e-85 318.2 248 68.1
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 1.6e-84 316.6 243 70.4
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.6e-84 316.6 242 65.3
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.6e-84 316.6 193 79.3
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 2.8e-84 315.8 244 66.0
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 2.8e-84 315.8 189 81.0
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 3.6e-84 315.5 246 67.1
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 3.6e-84 315.5 193 79.3
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 8.1e-84 314.3 242 67.8
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.4e-83 313.5 244 66.0
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 1.8e-83 313.2 244 66.0
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 3.1e-83 312.4 243 69.1
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 3.1e-83 312.4 244 65.6
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 2.6e-82 309.3 244 66.8
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 4.4e-82 308.5 242 68.6
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 7.6e-82 307.8 187 78.6
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 7.6e-82 307.8 246 64.2
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 9.9e-82 307.4 244 66.0
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 1.7e-81 306.6 209 73.2
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.7e-81 306.6 222 68.5
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 1.1e-80 303.9 243 65.4
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 1.1e-80 303.9 222 69.8
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 1.9e-80 303.1 189 79.4
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 2.4e-80 302.8 255 63.9
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 2.4e-80 302.8 211 73.5
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 1.2e-79 300.4 242 66.5
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 4.6e-79 298.5 252 63.1
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 1.0e-78 297.4 236 65.3
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 1.3e-78 297.0 248 63.7
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 1.3e-78 297.0 246 65.0
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 1.7e-78 296.6 247 64.4
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 2.3e-78 296.2 253 63.6
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 3.0e-78 295.8 247 64.0
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 3.0e-78 295.8 196 73.5
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 3.0e-78 295.8 197 73.1
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 3.9e-78 295.4 245 65.7
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 5.1e-78 295.0 250 63.2
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 1.5e-77 293.5 246 63.8
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 1.9e-77 293.1 255 62.4
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 9.6e-77 290.8 239 66.1
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 2.1e-76 289.7 232 65.5
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 2.1e-76 289.7 227 64.3
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 4.8e-76 288.5 222 66.2
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 4.8e-76 288.5 244 63.9
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 6.2e-76 288.1 247 64.0
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 1.1e-75 287.3 219 66.2
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 1.4e-75 287.0 195 73.3
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 5.3e-75 285.0 233 61.4
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 5.3e-75 285.0 197 69.0
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 9.0e-75 284.3 250 63.2
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 1.5e-74 283.5 244 62.3
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 1.5e-74 283.5 244 62.3
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 1.5e-74 283.5 247 59.5
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 5.8e-74 281.6 249 63.5
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 9.9e-74 280.8 254 61.4
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 1.3e-73 280.4 248 62.5
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 2.2e-73 279.6 192 73.4
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 3.8e-73 278.9 193 73.6
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 3.2e-72 275.8 244 61.5
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 7.1e-72 274.6 217 66.8
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 3.9e-70 268.9 253 59.7
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.3e-69 265.8 204 67.2
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 3.3e-69 265.8 164 79.9
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 1.4e-64 250.4 209 63.6
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 1.2e-63 247.3 203 64.5
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 4.6e-55 218.8 201 60.2
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 1.8e-54 216.9 120 83.3
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 3.9e-54 215.7 121 86.0
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 4.8e-52 208.8 121 79.3
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 5.9e-50 201.8 166 65.1
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 2.7e-47 193.0 111 79.3
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 7.9e-47 191.4 150 60.0
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 2.3e-46 189.9 186 54.3
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 3.3e-45 186.0 208 46.6
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 4.1e-43 179.1 144 56.2
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 8.5e-41 171.4 173 52.6
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 9.4e-40 167.9 152 52.6
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 9.4e-32 141.4 117 68.4
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 4.4e-29 132.5 68 86.8
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 1.7e-28 130.6 176 38.1
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 4.5e-18 95.9 152 32.2
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 3.0e-14 83.2 123 43.9
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 6.8e-14 82.0 132 34.8
Nn2g10688 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.2e-10 71.2 102 45.1
HanXRQChr10g0292531 Helianthus annuus HOM05D005690 ORTHO05D007075 2.3e-06 57.0 67 52.2


User provided reference genes

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