Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 0.0e+00 1087.0 529 100.0
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.0e-277 959.5 536 87.3
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 4.9e-251 870.9 557 77.6
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.0e-227 793.5 558 71.7
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 3.8e-227 791.6 560 70.5
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 6.7e-224 780.8 591 67.0
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 5.0e-219 764.6 558 69.2
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 2.5e-218 762.3 557 67.5
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 2.5e-218 762.3 554 68.4
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 2.5e-215 752.3 546 68.3
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 9.7e-215 750.4 557 67.7
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.1e-209 732.6 554 67.5
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 7.9e-209 730.7 563 64.5
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.8e-208 729.6 564 65.2
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 3.3e-191 672.2 569 60.3
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 4.8e-190 668.3 535 62.6
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 1.0e-187 660.6 562 58.4
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.2e-187 659.4 571 59.5
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 6.1e-185 651.4 559 59.2
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.4e-184 650.2 571 58.5
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 1.8e-184 649.8 569 58.7
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 1.8e-184 649.8 568 58.1
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 3.0e-184 649.0 560 59.1
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 4.0e-184 648.7 580 56.9
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.8e-184 647.5 571 58.0
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 4.4e-183 645.2 561 57.8
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 5.7e-183 644.8 559 57.4
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 4.8e-182 641.7 550 60.0
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 8.3e-182 641.0 562 58.5
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 1.1e-181 640.6 558 58.2
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 2.4e-181 639.4 539 59.2
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 4.1e-181 638.6 540 57.8
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 9.1e-181 637.5 591 56.7
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 9.1e-181 637.5 560 57.5
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 2.3e-179 632.9 581 57.3
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 2.3e-179 632.9 548 57.5
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 3.8e-179 632.1 565 58.1
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.5e-179 631.3 585 56.1
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 5.5e-178 628.2 563 57.5
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 9.5e-178 627.5 563 56.3
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 1.2e-177 627.1 515 61.4
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 4.0e-176 622.1 559 56.7
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 4.0e-176 622.1 466 67.0
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.2e-176 621.7 558 57.3
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 8.9e-176 620.9 568 56.9
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.2e-175 620.5 592 55.1
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 1.5e-175 620.2 555 56.6
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.5e-175 620.2 549 57.9
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 4.4e-175 618.6 504 61.5
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.3e-174 617.1 568 56.7
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 2.2e-174 616.3 566 55.7
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 3.7e-174 615.5 573 55.1
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 8.3e-174 614.4 494 62.3
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 5.4e-173 611.7 562 55.7
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 7.8e-172 607.8 549 55.9
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 2.9e-171 605.9 548 55.7
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 5.6e-170 601.7 559 56.0
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 5.6e-170 601.7 561 54.0
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 7.3e-170 601.3 539 55.3
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 7.3e-170 601.3 588 53.6
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 7.3e-170 601.3 616 51.5
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 9.5e-170 600.9 543 56.5
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.1e-169 599.7 561 54.7
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 2.8e-169 599.4 564 55.7
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 1.4e-168 597.0 548 55.8
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.4e-168 597.0 587 52.8
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 1.8e-168 596.7 558 55.7
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 3.0e-168 595.9 553 55.5
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 4.0e-168 595.5 573 54.6
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 2.0e-167 593.2 545 56.0
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 7.5e-167 591.3 570 53.9
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 4.9e-166 588.6 558 55.2
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.9e-166 588.6 563 52.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 1.8e-165 586.6 518 56.9
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 5.4e-165 585.1 538 55.9
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 9.2e-165 584.3 551 53.7
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 3.5e-164 582.4 538 54.8
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 6.0e-164 581.6 535 54.4
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 6.0e-164 581.6 587 51.6
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 2.3e-163 579.7 581 52.5
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 6.6e-163 578.2 468 60.5
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.2e-161 573.9 547 52.8
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 2.3e-160 569.7 498 56.2
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 6.8e-160 568.2 492 57.5
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.2e-159 567.4 496 58.3
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 3.4e-159 565.8 553 52.6
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 1.7e-158 563.5 540 53.0
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 7.0e-157 558.1 620 49.2
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 5.6e-154 548.5 481 54.7
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 1.2e-151 540.8 375 72.8
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 2.9e-150 536.2 532 52.1
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 5.1e-147 525.4 374 68.2
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 1.8e-144 516.9 388 63.9
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 3.2e-141 506.1 389 63.8
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.0e-139 501.1 557 47.6
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 3.9e-139 499.2 452 58.0
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 5.1e-139 498.8 389 64.3
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 1.8e-136 490.3 347 67.4
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 5.8e-135 485.3 532 48.9
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.9e-134 483.0 460 56.7
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 7.3e-130 468.4 348 66.1
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 1.4e-125 454.1 577 44.5
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 1.9e-125 453.8 537 47.9
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 1.2e-124 451.1 406 53.9
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 2.3e-123 446.8 352 64.5
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 5.3e-120 435.6 345 63.2
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 6.9e-120 435.3 452 53.1
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 2.3e-115 420.2 448 46.4
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.4e-112 411.0 525 46.1
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 4.0e-112 409.5 322 62.1
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 1.9e-109 400.6 327 60.9
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 1.2e-108 397.9 451 48.1
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 6.9e-104 382.1 300 62.7
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 9.0e-104 381.7 300 62.3
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 5.9e-103 379.0 321 58.6
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 2.9e-102 376.7 493 40.2
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 3.4e-95 353.2 484 39.7
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 5.0e-86 322.8 313 52.1
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.5e-82 311.2 256 60.5
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 6.3e-81 305.8 246 63.8
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.4e-80 304.7 248 59.7
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.5e-74 282.3 212 64.2
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 3.7e-65 253.4 480 31.0
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.3e-59 234.2 216 50.9
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.4e-56 224.9 145 71.7
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.0e-55 221.1 164 67.1
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.7e-54 218.0 220 49.5
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.6e-52 210.3 247 45.3
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.9e-46 190.3 130 65.4
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 7.5e-42 176.0 165 48.5
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 1.6e-36 158.3 99 68.7
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 9.9e-34 149.1 173 41.0
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 9.2e-32 142.5 205 43.9
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 5.1e-30 136.7 150 44.7
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 2.6e-26 124.4 175 41.1
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.4e-24 118.6 82 68.3
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 4.2e-24 117.1 135 45.9
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 3.5e-23 114.0 137 45.3
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.9e-21 108.2 157 43.9
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 1.8e-19 101.7 62 75.8
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 2.6e-18 97.8 139 43.2
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 1.4e-16 92.0 70 61.4
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.8e-09 67.4 73 45.2
SEGI_15377 Sequoiadendron giganteum HOM05D005105 ORTHO05D006244 3.5e-07 60.8 67 44.8


User provided reference genes

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