Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.6e-150 533.5 272 100.0
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 2.8e-141 505.4 272 94.5
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 8.2e-117 424.1 277 82.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 2.2e-106 389.4 273 76.2
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 2.7e-104 382.5 266 75.6
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 7.9e-104 380.9 272 76.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 3.0e-103 379.0 269 74.0
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.5e-102 376.7 269 73.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.5e-102 376.7 269 73.6
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.7e-102 374.0 267 74.2
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 2.4e-100 369.4 279 74.6
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 4.1e-100 368.6 277 74.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 6.9e-100 367.9 271 73.4
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 6.9e-100 367.9 268 74.6
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.0e-98 364.0 272 72.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.2e-98 362.8 272 73.2
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.8e-98 362.1 270 71.9
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.9e-97 359.8 279 71.0
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 9.4e-97 357.5 270 71.9
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.6e-96 355.5 231 79.7
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 6.1e-96 354.8 270 72.6
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 7.9e-96 354.4 271 72.7
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 8.8e-95 350.9 274 70.8
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 2.6e-94 349.4 267 71.9
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.7e-94 348.2 267 72.7
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 2.2e-93 346.3 266 69.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.8e-93 345.9 234 78.2
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.1e-92 344.0 272 71.3
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.8e-92 343.2 235 79.1
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.1e-92 342.4 232 78.9
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 7.0e-92 341.3 270 70.0
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.1e-92 340.9 232 78.4
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.2e-91 340.5 277 69.7
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.6e-91 340.1 277 70.0
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 1.6e-91 340.1 272 72.1
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.0e-91 339.7 231 77.1
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.6e-91 339.3 265 70.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 3.5e-91 339.0 279 69.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 5.9e-91 338.2 271 67.5
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.9e-91 338.2 214 80.8
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 7.7e-91 337.8 280 68.6
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 7.7e-91 337.8 278 67.6
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.0e-90 337.4 272 68.8
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 1.7e-90 336.7 242 75.6
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 3.8e-90 335.5 283 66.4
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.5e-90 334.7 265 68.3
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 4.2e-89 332.0 231 74.5
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.1e-88 329.7 267 67.8
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.6e-88 328.9 230 73.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.6e-88 328.9 232 75.9
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.6e-88 328.9 235 74.9
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 8.0e-88 327.8 223 78.9
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.0e-87 327.4 275 66.5
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.3e-87 326.2 240 74.6
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 3.0e-87 325.9 198 83.8
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.0e-87 325.5 200 81.0
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 8.8e-87 324.3 232 75.0
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.0e-86 323.2 232 75.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-86 323.2 188 87.2
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 3.3e-86 322.4 218 78.4
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 3.3e-86 322.4 218 78.4
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.4e-86 322.0 279 66.7
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.7e-86 321.6 204 82.4
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 5.7e-86 321.6 279 67.4
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 7.5e-86 321.2 218 78.4
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 7.5e-86 321.2 201 80.1
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.3e-85 320.5 228 75.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.7e-85 320.1 201 79.6
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 2.2e-85 319.7 191 84.8
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 2.8e-85 319.3 231 73.2
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 4.8e-85 318.5 233 73.0
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 4.8e-85 318.5 187 85.6
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 6.3e-85 318.2 264 67.4
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 6.3e-85 318.2 218 77.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 6.3e-85 318.2 200 81.0
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 8.2e-85 317.8 282 66.3
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.1e-84 317.4 234 72.6
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.4e-84 317.0 232 75.0
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.4e-84 317.0 187 85.6
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.4e-84 317.0 262 65.6
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.4e-84 316.2 199 81.9
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 3.1e-84 315.8 236 73.7
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 3.1e-84 315.8 265 67.5
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.1e-84 315.5 246 71.1
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 9.1e-84 314.3 216 76.4
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 2.7e-83 312.8 236 72.9
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 5.9e-83 311.6 216 75.5
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.9e-82 309.3 186 83.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 6.5e-82 308.1 194 81.4
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 6.5e-82 308.1 264 66.3
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 1.1e-81 307.4 269 62.1
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.9e-81 306.6 190 81.1
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 3.2e-81 305.8 202 81.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 2.7e-80 302.8 216 76.4
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.8e-79 300.1 233 68.7
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 4.0e-79 298.9 190 77.9
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 3.4e-78 295.8 185 79.5
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.4e-76 288.5 272 61.4
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 7.0e-76 288.1 247 64.0
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 5.9e-75 285.0 270 59.3
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 6.8e-71 271.6 195 67.7
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.4e-70 268.9 242 65.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.0e-67 260.0 179 78.8
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 8.6e-66 254.6 188 65.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 5.6e-65 251.9 192 64.1
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.6e-64 250.4 267 55.8
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.7e-61 240.4 170 77.1
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 3.7e-61 239.2 198 62.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.3e-55 219.9 139 81.3
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 9.8e-54 214.5 170 68.8
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.6e-48 197.2 179 59.8
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.6e-46 189.9 210 48.1
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 2.2e-45 186.8 109 83.5
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 8.3e-45 184.9 199 48.2
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 3.2e-44 183.0 139 66.9
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.3e-39 166.8 109 71.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.7e-35 153.3 118 72.0
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.5e-33 147.5 188 42.0
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 4.3e-25 119.4 82 73.2
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 6.7e-18 95.5 71 71.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-14 83.6 93 55.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.7e-13 80.9 47 80.9
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 9.6e-09 65.1 44 72.7
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 4.8e-08 62.8 65 56.9
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 6.2e-08 62.4 44 63.6


User provided reference genes

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