Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G065900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 4.7e-91 337.8 166 100.0
VMungo0464G1881 Vigna mungo HOM05D004693 ORTHO05D005545 7.1e-63 244.2 178 74.2
Glyma.19G047800 Glycine max HOM05D004693 ORTHO05D005545 9.2e-63 243.8 178 71.3
Glyma.18G296600 Glycine max HOM05D004693 ORTHO05D005545 3.3e-44 182.2 167 61.7
Medtr6g025680 Medicago truncatula HOM05D004693 ORTHO05D005545 4.3e-44 181.8 173 59.0
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea HOM05D004693 ORTHO05D005545 1.3e-43 180.3 178 56.2
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea HOM05D004693 ORTHO05D005545 1.3e-43 180.3 178 56.2
Lj2g0008970 Lotus japonicus HOM05D004693 ORTHO05D005545 8.1e-43 177.6 176 58.0
Phvul.008G005900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 8.1e-43 177.6 172 58.1
VMungo1383G0350 Vigna mungo HOM05D004693 ORTHO05D005545 8.1e-43 177.6 172 57.6
Glyma.08G365700 Glycine max HOM05D004693 ORTHO05D005545 1.1e-42 177.2 167 59.9
Medtr6g018550 Medicago truncatula HOM05D004693 ORTHO05D005545 3.1e-42 175.6 173 57.8
Phvul.007G143200 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 1.5e-41 173.3 172 57.6
Medtr7g007280 Medicago truncatula HOM05D004693 ORTHO05D005545 3.4e-41 172.2 174 56.9
Lj1g0002546 Lotus japonicus HOM05D004693 ORTHO05D005545 7.6e-41 171.0 166 57.8
Lalb_Chr21g0317811 Lupinus albus HOM05D004693 ORTHO05D005545 1.3e-40 170.2 171 57.3
Psat3g205360 Pisum sativum HOM05D004693 ORTHO05D005545 2.9e-40 169.1 174 56.9
TPR.G32451 Trifolium pratense HOM05D004693 ORTHO05D005545 4.9e-40 168.3 174 58.0
Lalb_Chr17g0335881 Lupinus albus HOM05D004693 ORTHO05D005545 6.4e-40 167.9 178 56.7
TPR.G9726 Trifolium pratense HOM05D004693 ORTHO05D005545 7.1e-39 164.5 174 56.3
Ca_04048_v3 Cicer arietinum L. HOM05D004693 ORTHO05D005545 2.7e-38 162.5 174 55.2
Cpa.g.sc282.10 Carica papaya HOM05D004693 ORTHO05D005545 2.3e-37 159.5 177 48.0
Prupe.5G053500 Prunus persica HOM05D004693 ORTHO05D005545 2.3e-37 159.5 174 53.4
MD09G1253000 Malus domestica HOM05D004693 ORTHO05D005545 3.3e-36 155.6 172 51.2
MD00G1132400 Malus domestica HOM05D004693 ORTHO05D005545 7.4e-36 154.5 180 52.8
Manes.02G068600 Manihot esculenta HOM05D004693 ORTHO05D005545 2.8e-35 152.5 172 50.0
Prupe.3G157500 Prunus persica HOM05D004693 ORTHO05D005545 1.4e-34 150.2 173 50.9
Psat1g081400 Pisum sativum HOM05D004693 ORTHO05D005545 5.3e-34 148.3 123 64.2
GSVIVG01031023001 Vitis vinifera HOM05D004693 ORTHO05D005545 1.2e-33 147.1 174 47.7
MD06G1045700 Malus domestica HOM05D004693 ORTHO05D005545 1.5e-33 146.7 158 51.9
Nn4g23871 Nelumbo nucifera HOM05D004693 ORTHO05D005545 2.0e-33 146.4 172 49.4
Potri.004G099500 Populus trichocarpa HOM05D004693 ORTHO05D005545 2.6e-33 146.0 172 49.4
Ciclev10012575m.g Citrus clementina HOM05D004693 ORTHO05D005545 1.3e-32 143.7 169 49.1
Dinv33946 Davidia involucrata HOM05D004693 ORTHO05D005545 6.5e-32 141.4 141 54.6
TAR629G3320 Trochodendron aralioides HOM05D004693 ORTHO05D005545 1.9e-31 139.8 130 55.4
FvH4_5g20670 Fragaria vesca HOM05D004693 ORTHO05D005545 2.5e-31 139.4 178 48.3
Sed0027829 Sechium edule HOM05D004693 ORTHO05D005545 3.2e-31 139.0 163 50.3
CANSAT78G0919 Cannabis sativa HOM05D004693 ORTHO05D005545 5.5e-31 138.3 141 52.5
Actinidia15883 Actinidia chinensis HOM05D004693 ORTHO05D005545 1.2e-30 137.1 170 48.2
Gohir.A12G053800 Gossypium hirsutum HOM05D004693 ORTHO05D005545 1.6e-30 136.7 120 58.3
Gohir.D12G052500 Gossypium hirsutum HOM05D004693 ORTHO05D005545 1.6e-30 136.7 120 58.3
Gorai.008G055600 Gossypium raimondii HOM05D004693 ORTHO05D005545 1.6e-30 136.7 120 58.3
RcHm_v2.0_Chr7g0206351 Rosa chinensis HOM05D004693 ORTHO05D005545 1.6e-30 136.7 145 53.8
Atru.chr1.1699 Acer truncatum HOM05D004693 ORTHO05D005545 3.5e-30 135.6 166 48.8
vmacro05556 Vaccinium macrocarpon HOM05D004693 ORTHO05D005545 4.6e-30 135.2 171 46.8
PGR004G1354 Punica granatum HOM05D004693 ORTHO05D005545 6.0e-30 134.8 110 60.9
ClCG05G011670 Citrullus lanatus HOM05D004693 ORTHO05D005545 1.3e-29 133.7 163 47.9
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla HOM05D004693 ORTHO05D005545 2.3e-29 132.9 151 47.7
Lj2A442G45 Lonicera japonica HOM05D004693 ORTHO05D005545 2.3e-29 132.9 151 49.7
Nn3g17869 Nelumbo nucifera HOM05D004693 ORTHO05D005545 3.9e-29 132.1 111 59.5
Sed0014747 Sechium edule HOM05D004693 ORTHO05D005545 8.7e-29 131.0 109 59.6
PGSC0003DMG401026407 Solanum tuberosum HOM05D004693 ORTHO05D005545 8.7e-29 131.0 169 47.3
Sp5g22010 Schrenkiella parvula HOM05D004693 ORTHO05D005545 1.1e-28 130.6 119 55.5
Thecc.04G133900 Theobroma cacao HOM05D004693 ORTHO05D005545 1.5e-28 130.2 174 43.7
AT1G67080 Arabidopsis thaliana HOM05D004693 ORTHO05D005545 2.5e-28 129.4 126 55.6
TWI53G0853 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 2.5e-28 129.4 174 46.0
Carub.0002s1337 Capsella rubella HOM05D004693 ORTHO05D005545 3.3e-28 129.0 118 56.8
Aqoxy3G00271 Aquilegia oxysepala HOM05D004693 ORTHO05D005545 4.3e-28 128.6 108 59.3
A02p13930 Brassica napus HOM05D004693 ORTHO05D005545 5.7e-28 128.3 133 50.4
BraA02t06454Z Brassica rapa HOM05D004693 ORTHO05D005545 5.7e-28 128.3 133 50.4
HanXRQChr12g0376541 Helianthus annuus HOM05D004693 ORTHO05D005545 5.7e-28 128.3 166 45.8
PSO478G2919 Papaver somniferum HOM05D004693 ORTHO05D005545 5.7e-28 128.3 111 58.6
Sed0024744 Sechium edule HOM05D004693 ORTHO05D005545 7.4e-28 127.9 163 46.0
Sopen02g030740 Solanum pennellii HOM05D004693 ORTHO05D005545 9.6e-28 127.5 174 47.1
CsaV3_3G020700 Cucumis sativus L. HOM05D004693 ORTHO05D005545 1.3e-27 127.1 163 47.2
Thhalv10019078m.g Eutrema salsugineum HOM05D004693 ORTHO05D005545 1.3e-27 127.1 118 55.1
HanXRQChr15g0471501 Helianthus annuus HOM05D004693 ORTHO05D005545 1.3e-27 127.1 166 44.6
C02p22440 Brassica napus HOM05D004693 ORTHO05D005545 1.6e-27 126.7 156 44.9
AL2G25440 Arabidopsis lyrata HOM05D004693 ORTHO05D005545 2.1e-27 126.3 129 54.3
CARHR059530 Cardamine hirsuta HOM05D004693 ORTHO05D005545 2.1e-27 126.3 126 56.3
THA.LOC104805567 Tarenaya hassleriana HOM05D004693 ORTHO05D005545 2.1e-27 126.3 117 55.6
BcaC03g14797 Brassica carinata HOM05D004693 ORTHO05D005545 2.8e-27 125.9 156 44.2
TWI77G0167 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 2.8e-27 125.9 174 46.6
MSTRG.15294 Avicennia marina HOM05D004693 ORTHO05D005545 3.7e-27 125.6 170 44.7
BolC2t08398H Brassica oleracea HOM05D004693 ORTHO05D005545 4.8e-27 125.2 136 49.3
PSO017G3734 Papaver somniferum HOM05D004693 ORTHO05D005545 8.2e-27 124.4 111 57.7
BcaB05g24236 Brassica carinata HOM05D004693 ORTHO05D005545 1.4e-26 123.6 110 58.2
DCAR_025914 Daucus carota HOM05D004693 ORTHO05D005545 1.4e-26 123.6 120 51.7
Solyc02g086050.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.4e-26 123.6 172 45.3
ECA246G3075 Erigeron canadensis HOM05D004693 ORTHO05D005545 1.8e-26 123.2 168 45.8
Oeu010266.2 Olea europaea HOM05D004693 ORTHO05D005545 1.8e-26 123.2 107 57.9
Sabra17G0095200 Salix brachista HOM05D004693 ORTHO05D005545 2.4e-26 122.9 129 51.2
TAR371G1203 Trochodendron aralioides HOM05D004693 ORTHO05D005545 2.4e-26 122.9 111 56.8
Aa31LG2G3480 Aethionema arabicum HOM05D004693 ORTHO05D005545 3.1e-26 122.5 136 48.5
Nitab4.5_0001217g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 6.9e-26 121.3 163 44.8
Eucgr.F02496 Eucalyptus grandis HOM05D004693 ORTHO05D005545 2.6e-25 119.4 178 41.0
Peaxi162Scf00394g00618 Petunia axillaris HOM05D004693 ORTHO05D005545 3.4e-25 119.0 182 42.9
DCAR_017191 Daucus carota HOM05D004693 ORTHO05D005545 4.5e-25 118.6 109 55.0
FAN13G1234 Fragaria x ananassa HOM05D004693 ORTHO05D005545 1.3e-24 117.1 211 39.8
ATR1125G077 Amborella trichopoda HOM05D004693 ORTHO05D005545 1.7e-24 116.7 112 54.5
Potri.017G114900 Populus trichocarpa HOM05D004693 ORTHO05D005545 1.7e-24 116.7 115 53.0
Solyc02g063170.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 2.2e-24 116.3 156 46.8
Lsat_1_v5_gn_3_79761 Lactuca sativa HOM05D004693 ORTHO05D005545 1.1e-23 114.0 166 45.2
Peaxi162Scf00501g00318 Petunia axillaris HOM05D004693 ORTHO05D005545 1.1e-23 114.0 86 67.4
SGA_v2.0_scaffold115G32108 Striga asiatica HOM05D000286 ORTHO05D000170 1.1e-23 114.0 118 51.7
PGSC0003DMG400024184 Solanum tuberosum HOM05D004693 ORTHO05D005545 1.4e-23 113.6 106 55.7
EL10Ac2g04567 Beta vulgaris HOM05D004693 ORTHO05D005545 2.5e-23 112.8 108 54.6
Actinidia36320 Actinidia chinensis HOM05D004693 ORTHO05D005545 3.2e-23 112.5 166 43.4
Sopen02g014240 Solanum pennellii HOM05D004693 ORTHO05D005545 4.2e-23 112.1 154 45.5
CAN.G625.24 Capsicum annuum HOM05D004693 ORTHO05D005545 5.5e-23 111.7 195 38.5
CAN.G225.4 Capsicum annuum HOM05D004693 ORTHO05D005545 9.3e-23 110.9 106 55.7
Nitab4.5_0004398g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 9.3e-23 110.9 106 56.6
MSTRG.23575 Avicennia marina HOM05D004693 ORTHO05D005545 1.2e-22 110.5 109 54.1
Cc07_g08830 Coffea canephora HOM05D004693 ORTHO05D005545 6.1e-22 108.2 174 43.1
Eucgr.F02495 Eucalyptus grandis HOM05D004693 ORTHO05D005545 1.0e-21 107.5 116 50.0
HPP92_000177 Vanilla planifolia HOM05D004693 ORTHO05D005545 2.3e-21 106.3 109 50.5
Migut.H00217 Erythranthe guttata HOM05D004693 ORTHO05D005545 3.0e-21 105.9 86 64.0
HPP92_021861 Vanilla planifolia HOM05D004693 ORTHO05D005545 5.1e-21 105.1 108 50.9
Hund13716 Selenicereus undatus HOM05D004693 ORTHO05D005545 6.7e-21 104.8 106 53.8
unitig_32.g11889 Utricularia gibba HOM05D004693 ORTHO05D005545 6.7e-21 104.8 111 49.5
Solyc03g034240.4 Solanum lycopersicum HOM05D004693 ORTHO05D005545 8.7e-21 104.4 161 41.0
Sopen03g007020 Solanum pennellii HOM05D004693 ORTHO05D005545 1.5e-20 103.6 160 40.0
PGSC0003DMG402019589 Solanum tuberosum HOM05D004693 ORTHO05D005545 1.5e-20 103.6 161 41.0
QL02p051402 Quercus lobata HOM05D004693 ORTHO05D005545 1.9e-20 103.2 76 68.4
SGA_v2.0_scaffold33G13498 Striga asiatica HOM05D004693 ORTHO05D005545 1.3e-19 100.5 107 52.3
SalBow5G5330 Salvia bowleyana HOM05D004693 ORTHO05D005545 6.3e-19 98.2 85 62.4
Os01g0128300 Oryza sativa ssp. japonica HOM05D004693 ORTHO05D005545 1.1e-18 97.4 78 59.0
Ah.16g101760 Amaranthus hybridus HOM05D004693 ORTHO05D005545 2.4e-18 96.3 76 64.5
AUR62009000 Chenopodium quinoa HOM05D004693 ORTHO05D005545 3.1e-18 95.9 78 61.5
Pp3c3_37490 Physcomitrium patens HOM05D004693 ORTHO05D005545 5.3e-18 95.1 113 47.8
AUR62023302 Chenopodium quinoa HOM05D004693 ORTHO05D005545 6.9e-18 94.7 78 61.5
Zm00001eb335080 Zea mays HOM05D004693 ORTHO05D005545 2.6e-17 92.8 76 60.5
Migut.L00317 Erythranthe guttata HOM05D004693 ORTHO05D005545 4.5e-17 92.0 73 64.4
Zm00001eb125470 Zea mays HOM05D004693 ORTHO05D005545 5.9e-17 91.7 73 63.0
Sabra04G0080500 Salix brachista HOM05D004693 ORTHO05D005545 1.3e-16 90.5 170 38.8
COL.COLO4_09328 Corchorus olitorius HOM05D004693 ORTHO05D005545 5.0e-16 88.6 66 66.7
Nitab4.5_0000912g0240 Nicotiana tabacum HOM05D004693 ORTHO05D005545 5.0e-16 88.6 80 56.2
SalBow3G4509 Salvia bowleyana HOM05D004693 ORTHO05D005545 6.5e-16 88.2 87 55.2
Nitab4.5_0000659g0050 Nicotiana tabacum HOM05D004693 ORTHO05D005545 8.5e-16 87.8 93 51.6
Nitab4.5_0002207g0070 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.1e-15 87.4 109 44.0
Pp3c12_21540 Physcomitrium patens HOM05D004693 ORTHO05D005545 1.9e-15 86.7 110 47.3
SEGI_37456 Sequoiadendron giganteum HOM05D004693 ORTHO05D005545 4.2e-15 85.5 107 46.7
unitig_748.g8751 Utricularia gibba HOM05D004693 ORTHO05D005545 1.6e-14 83.6 132 40.9
Mapoly0134s0007 Marchantia polymorpha HOM05D004693 ORTHO05D005545 2.1e-14 83.2 131 40.5
SMO356G0314 Selaginella moellendorffii HOM05D004693 ORTHO05D005545 2.0e-12 76.6 72 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis HOM05D004693 ORTHO05D005545 8.2e-11 71.2 72 51.4
MELO3C023805.2 Cucumis melo HOM05D004693 ORTHO05D005545 1.1e-10 70.9 44 70.5
Duzib133G0419 Durio zibethinus HOM05D004693 ORTHO05D005545 1.8e-10 70.1 93 39.8
Nitab4.5_0007808g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.5e-09 67.0 84 41.7
Nitab4.5_0002207g0120 Nicotiana tabacum HOM05D004693 ORTHO05D005545 4.5e-09 65.5 56 53.6
QL02p051406 Quercus lobata HOM05D004693 ORTHO05D005545 5.0e-08 62.0 91 40.7
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis HOM05D004693 ORTHO05D005545 3.2e-07 59.3 58 51.7
CDE12G0456 Ceratophyllum demersum HOM05D001541 ORTHO05D001465 2.7e-06 56.2 55 49.1
CDE06G0519 Ceratophyllum demersum HOM05D004693 ORTHO05D005545 6.1e-06 55.1 55 50.9


User provided reference genes

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