Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.2e-152 543.1 273 100.0
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 8.1e-141 503.8 273 92.7
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 1.1e-134 483.4 275 90.2
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 1.6e-120 436.4 287 79.1
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 3.0e-111 405.6 288 74.7
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 5.1e-111 404.8 282 73.0
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 1.4e-108 396.7 278 74.8
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 1.1e-105 387.1 286 71.3
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 5.5e-105 384.8 294 70.7
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 7.7e-99 364.4 287 67.9
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 2.9e-98 362.5 263 72.2
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 6.5e-98 361.3 270 71.5
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 6.5e-98 361.3 262 71.8
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 6.5e-98 361.3 213 83.1
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 5.5e-97 358.2 227 79.3
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 9.4e-97 357.5 275 69.5
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 1.2e-96 357.1 275 68.7
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.2e-96 357.1 221 79.6
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.2e-96 357.1 227 77.5
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 1.6e-96 356.7 223 79.4
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.6e-96 356.7 221 79.2
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.6e-96 356.7 221 79.2
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 2.1e-96 356.3 281 68.3
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 4.7e-96 355.1 264 70.5
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 6.1e-96 354.8 275 69.5
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 8.8e-95 350.9 227 78.0
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.2e-94 350.5 207 84.1
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 1.2e-94 350.5 220 80.9
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.2e-94 350.5 206 84.0
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 1.5e-94 350.1 269 69.5
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 1.5e-94 350.1 220 80.5
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.0e-94 349.7 275 68.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 3.3e-94 349.0 282 66.3
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 4.4e-94 348.6 284 67.6
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.5e-94 347.8 270 68.5
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 7.5e-94 347.8 264 67.8
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 1.7e-93 346.7 201 84.6
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.7e-93 346.7 294 64.6
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 2.2e-93 346.3 281 66.5
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.2e-93 346.3 281 66.5
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 2.8e-93 345.9 278 69.4
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 3.7e-93 345.5 218 78.4
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 4.8e-93 345.1 218 78.4
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 6.3e-93 344.7 280 66.4
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 8.3e-93 344.4 214 79.9
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 1.1e-92 344.0 220 76.4
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.4e-92 343.6 218 77.5
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.1e-92 342.4 270 67.4
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 5.3e-92 341.7 268 67.5
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 1.2e-91 340.5 264 70.1
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 2.0e-91 339.7 252 70.2
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 4.5e-91 338.6 277 65.0
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 5.9e-91 338.2 246 70.7
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 1.0e-90 337.4 216 78.2
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 1.3e-90 337.0 273 69.2
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 1.3e-90 337.0 261 65.1
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 1.7e-90 336.7 277 66.8
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 3.8e-90 335.5 268 64.6
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 5.0e-90 335.1 206 80.6
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 1.1e-89 334.0 216 77.8
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 1.5e-89 333.6 218 78.4
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 1.5e-89 333.6 270 65.6
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 2.5e-89 332.8 226 74.3
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 3.2e-89 332.4 247 68.8
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 3.2e-89 332.4 208 80.8
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 4.2e-89 332.0 217 76.0
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 7.2e-89 331.3 219 75.8
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.2e-89 331.3 272 65.4
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.2e-89 331.3 272 65.4
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.6e-88 330.1 262 66.4
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.6e-88 330.1 220 75.9
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 1.6e-88 330.1 199 82.9
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 1.6e-88 330.1 227 72.7
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 2.7e-88 329.3 245 69.0
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 2.7e-88 329.3 245 69.0
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 4.7e-88 328.6 206 77.7
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 1.4e-87 327.0 245 68.6
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.4e-87 327.0 235 70.6
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 3.0e-87 325.9 183 84.2
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 5.2e-87 325.1 235 70.6
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 8.8e-87 324.3 278 65.8
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 2.0e-86 323.2 259 64.9
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 4.4e-86 322.0 184 82.6
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.8e-85 319.3 270 65.6
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 3.5e-83 312.4 253 64.8
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 3.5e-83 312.4 192 80.7
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 3.5e-83 312.4 200 77.0
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 7.7e-83 311.2 263 64.3
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 1.0e-82 310.8 173 86.1
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 6.6e-82 308.1 250 66.0
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 2.5e-81 306.2 224 70.1
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 2.6e-78 296.2 320 53.8
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 5.7e-78 295.0 241 64.7
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 1.3e-77 293.9 187 77.0
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 3.7e-77 292.4 170 82.4
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.0e-74 284.3 213 66.7
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 3.6e-72 275.8 202 68.3
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 2.3e-71 273.1 207 69.6
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 6.8e-71 271.6 195 69.2
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.5e-70 270.4 218 65.1
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 9.2e-68 261.2 220 65.5
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 6.0e-67 258.5 206 62.1
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.3e-66 256.5 156 80.8
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 3.9e-66 255.8 224 62.5
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 1.1e-55 221.1 266 50.8
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 2.3e-55 219.9 124 84.7
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.7e-53 213.8 194 61.9
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.9e-49 200.3 134 76.1
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 1.8e-47 193.7 207 51.7
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 7.6e-46 188.3 254 41.3
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 3.0e-42 176.4 221 48.4
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 6.6e-42 175.3 197 50.3
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 6.6e-42 175.3 121 74.4
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 9.0e-39 164.9 97 80.4
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 1.2e-38 164.5 146 63.0
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 5.8e-38 162.2 97 79.4
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 2.8e-32 143.3 80 83.8
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 1.1e-31 141.4 78 84.6
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 2.4e-31 140.2 275 37.1
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 2.6e-30 136.7 102 71.6
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 3.4e-30 136.3 173 50.9
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 1.6e-27 127.5 180 43.9
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.5e-27 126.3 78 78.2
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 3.8e-21 106.3 71 71.8
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 1.8e-18 97.4 83 63.9
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 2.3e-18 97.1 57 80.7
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 9.0e-15 85.1 50 80.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 9.0e-15 85.1 51 78.4
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 4.5e-14 82.8 55 74.5
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.7e-13 80.9 133 44.4
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.7e-13 80.9 47 78.7
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 2.9e-13 80.1 48 75.0
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 8.7e-10 68.6 47 72.3


User provided reference genes

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