Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 8.5e-244 846.7 452 100.0
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.4e-201 706.4 457 82.9
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.2e-178 630.2 461 77.9
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 9.0e-137 491.1 474 62.2
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 2.4e-129 466.5 467 57.2
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 6.9e-129 464.9 463 57.5
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 4.5e-128 462.2 481 56.1
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.3e-111 407.5 456 54.8
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.6e-109 400.6 471 53.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 3.7e-106 389.4 336 65.2
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.6e-101 374.0 480 49.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 2.3e-100 370.2 466 49.1
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.4e-97 360.1 475 47.6
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 9.5e-94 348.2 470 47.9
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 4.7e-93 345.9 464 47.4
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.4e-92 344.4 482 45.2
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 8.9e-92 341.7 477 47.4
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.0e-91 340.5 465 46.5
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 7.5e-91 338.6 466 45.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 8.3e-90 335.1 485 47.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.0e-88 330.5 454 46.7
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 7.8e-88 328.6 493 43.4
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 6.6e-87 325.5 475 45.5
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.5e-86 324.3 479 43.8
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.3e-86 322.8 276 64.1
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 5.6e-86 322.4 464 46.1
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.2e-85 321.2 487 41.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.0e-84 318.2 466 43.3
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.8e-84 317.4 460 45.7
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.8e-84 317.4 461 45.8
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 3.1e-84 316.6 567 39.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 5.8e-83 312.4 466 44.2
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.3e-82 311.2 496 42.5
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.2e-80 304.7 475 42.3
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.7e-80 303.5 460 43.7
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 2.3e-79 300.4 478 43.3
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 5.0e-79 299.3 456 43.9
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.5e-78 297.7 468 41.5
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 9.5e-78 295.0 459 41.2
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 9.5e-78 295.0 508 40.4
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 3.1e-76 290.0 482 41.9
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 9.8e-75 285.0 501 41.1
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.3e-74 284.6 435 42.5
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.9e-74 283.5 442 42.3
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 3.7e-74 283.1 471 42.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 8.3e-74 282.0 383 44.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 4.1e-73 279.6 496 39.3
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 4.1e-73 279.6 470 41.1
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 7.0e-73 278.9 175 85.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.7e-72 276.9 467 45.6
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 4.6e-72 276.2 456 40.1
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.0e-71 275.0 443 40.4
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 2.3e-71 273.9 482 39.0
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 5.1e-71 272.7 511 40.3
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.1e-71 272.7 474 41.1
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.9e-70 270.8 478 38.7
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 3.3e-70 270.0 505 37.8
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.2e-68 262.7 480 40.4
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 5.8e-67 259.2 392 44.9
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.7e-66 257.7 472 39.2
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 7.1e-65 252.3 411 42.3
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.2e-64 251.5 447 40.7
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 2.7e-64 250.4 467 38.8
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 8.6e-63 245.4 504 37.3
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 2.0e-59 234.2 323 45.5
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.9e-58 230.3 500 36.2
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.2e-57 226.9 401 41.4
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 7.1e-57 225.7 311 44.1
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.2e-56 224.9 502 35.1
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.5e-54 217.2 463 38.4
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 9.6e-54 215.3 413 41.4
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.1e-52 211.8 439 35.8
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.0e-52 209.9 304 42.4
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.5e-51 208.0 458 35.2
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.5e-51 208.0 431 37.4
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.7e-50 204.5 473 34.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 3.8e-50 203.4 426 32.6
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 4.9e-50 203.0 599 29.9
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 3.5e-48 196.8 298 43.0
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.7e-47 194.5 371 36.1
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 8.7e-47 192.2 200 51.0
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 1.9e-38 164.5 290 36.2
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 7.4e-38 162.5 427 33.7
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.4e-36 158.3 478 32.8
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 9.0e-36 155.6 470 31.5
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 2.0e-35 154.5 305 35.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.0e-34 152.1 554 28.0
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.9e-34 150.6 170 48.8
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.1e-33 146.0 277 40.1
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.6e-32 144.8 171 46.2
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.3e-31 141.0 141 48.2
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.0e-23 115.5 142 45.8
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.8e-23 114.8 203 40.9
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 8.5e-18 95.9 378 27.2
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 2.1e-16 91.3 274 29.6
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 6.7e-15 86.3 119 38.7
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 2.2e-13 81.3 169 32.0
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.6e-11 74.3 186 30.1
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.0e-10 72.4 99 43.4
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 6.5e-10 69.7 70 47.1
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 1.1e-09 68.9 139 31.7
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.2e-08 65.5 110 40.0


User provided reference genes

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