Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.5e-202 708.0 338 100.0
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.7e-180 636.0 336 90.2
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 6.5e-180 634.0 337 91.1
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.5e-179 632.1 337 89.9
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 7.1e-179 630.6 336 89.9
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.8e-175 617.8 336 87.2
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.6e-170 601.7 336 85.7
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.6e-167 592.8 331 87.6
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 6.9e-166 587.4 338 85.8
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.8e-145 519.6 308 83.4
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.8e-124 448.7 240 87.9
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 9.8e-104 380.9 343 57.4
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 1.1e-89 334.3 347 52.4
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 9.3e-86 321.2 344 46.5
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 8.7e-84 314.7 323 48.3
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 2.5e-83 313.2 349 46.1
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 3.1e-81 306.2 338 46.4
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 6.9e-81 305.1 338 46.2
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 1.1e-78 297.7 349 43.3
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 5.1e-76 288.9 333 45.9
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 1.9e-75 287.0 338 43.2
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-71 274.2 330 45.8
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 8.4e-71 271.6 345 44.9
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 1.2e-69 267.7 338 42.0
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 1.6e-69 267.3 360 41.7
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 6.7e-68 261.9 339 41.0
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 3.3e-67 259.6 227 52.0
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 2.8e-66 256.5 345 41.4
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 9.3e-62 241.5 339 41.9
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.2e-61 241.1 322 42.5
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 6.0e-61 238.8 342 41.8
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 3.0e-60 236.5 338 40.5
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 6.7e-60 235.3 226 50.0
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 7.4e-59 231.9 336 41.1
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 9.7e-59 231.5 358 39.1
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 4.8e-58 229.2 346 40.8
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.4e-57 226.9 309 41.7
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 2.0e-56 223.8 267 45.7
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 3.4e-56 223.0 344 39.0
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 7.6e-56 221.9 342 38.9
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 6.5e-55 218.8 347 36.3
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 4.6e-53 212.6 238 45.0
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 1.0e-52 211.5 339 33.9
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 1.7e-50 204.1 257 42.8
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 3.1e-49 199.9 349 34.4
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.4e-48 196.4 288 40.6
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.7e-45 186.8 251 39.8
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 6.7e-44 182.2 201 45.8
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 9.7e-43 178.3 332 34.6
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 4.8e-42 176.0 254 39.8
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 1.4e-41 174.5 164 49.4
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 1.4e-41 174.5 362 32.3
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 1.9e-38 164.1 195 41.5
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 2.5e-38 163.7 230 39.6
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 1.2e-37 161.4 127 53.5
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.1e-37 160.6 351 33.0
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 5.9e-32 142.5 173 40.5
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 1.7e-31 141.0 204 39.2
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 3.8e-31 139.8 277 34.3
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 2.0e-27 127.5 125 45.6
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 4.1e-25 119.8 189 33.9
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 2.2e-23 114.0 103 53.4
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.5e-22 111.3 130 42.3
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 1.9e-22 110.9 101 52.5
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 6.1e-21 105.9 131 41.2
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 6.1e-21 105.9 92 48.9
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 4.1e-17 93.2 78 55.1
TPR.G8151 Trifolium pratense HOM05D007822 ORTHO05D009360 2.0e-16 90.9 154 36.4
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 1.0e-15 88.6 107 38.3
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.5e-14 84.0 177 33.3
arahy.Tifrunner.gnm1.ann1.WW5NKJ Arachis hypogaea HOM05D007822 ORTHO05D009360 8.9e-12 75.5 73 47.9
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 1.5e-11 74.7 72 48.6
Sc19g0005840 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.4e-09 68.2 192 28.6
Sc01g0006370 Simmondsia chinensis HOM05D022095 ORTHO05D009360 4.1e-09 66.6 100 32.0
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 5.4e-09 66.2 89 43.8
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 9.2e-09 65.5 81 43.2
Medtr8g063930 Medicago truncatula HOM05D003615 ORTHO05D004858 2.7e-08 63.9 97 39.2
QL06p045688 Quercus lobata HOM05D002420 ORTHO05D002422 2.7e-08 63.9 309 22.3
Psat5g098960 Pisum sativum HOM05D007822 ORTHO05D009360 4.5e-08 63.2 88 40.9
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-07 61.6 55 45.5
Medtr3g084660 Medicago truncatula HOM05D007822 ORTHO05D009360 3.8e-07 60.1 89 42.7
Medtr3g084700 Medicago truncatula HOM05D007822 ORTHO05D009360 5.0e-07 59.7 82 46.3
GSVIVG01018983001 Vitis vinifera HOM05D002420 ORTHO05D002422 8.6e-07 58.9 214 25.2
Medtr3g070037 Medicago truncatula HOM05D007822 ORTHO05D009360 2.5e-06 57.4 49 53.1
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 2.5e-06 57.4 218 22.9
CiPaw.01G036200 Carya illinoinensis HOM05D002420 ORTHO05D002422 3.3e-06 57.0 274 22.3
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 3.3e-06 57.0 284 22.5
Actinidia08199 Actinidia chinensis HOM05D007822 ORTHO05D009360 4.3e-06 56.6 106 31.1
Sc06g0004600 Simmondsia chinensis HOM05D022095 ORTHO05D009360 9.5e-06 55.5 139 28.1


User provided reference genes

Program Settings