Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1927.9 996 100.0
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1506.5 977 83.5
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 0.0e+00 1446.4 975 79.6
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 0.0e+00 1386.3 975 76.5
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1207.6 976 66.6
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1180.2 978 65.7
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 0.0e+00 1170.2 978 65.3
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 0.0e+00 1158.7 982 65.1
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 0.0e+00 1140.9 982 64.4
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1113.6 967 61.2
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1101.7 958 61.4
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.0e-306 1055.8 967 59.2
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 5.5e-296 1021.1 967 58.5
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 2.4e-246 856.3 844 52.8
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 1.1e-243 847.4 843 53.4
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 2.5e-240 836.3 843 52.0
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 1.6e-239 833.6 842 51.5
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 1.4e-235 820.5 843 51.8
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.0e-233 814.3 844 50.9
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 7.4e-232 808.1 852 50.9
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 2.1e-231 806.6 840 51.2
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 8.1e-231 804.7 842 51.1
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.4e-230 803.1 853 50.5
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 7.6e-229 798.1 844 49.9
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 1.2e-226 790.8 843 50.2
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.6e-226 790.4 843 50.2
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 7.9e-226 788.1 843 49.7
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.3e-224 782.7 862 49.3
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 3.7e-223 779.2 838 49.9
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 4.8e-223 778.9 843 49.9
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 6.2e-223 778.5 849 49.2
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 4.5e-221 772.3 802 51.2
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 7.6e-221 771.5 841 49.0
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 1.6e-218 763.8 845 49.2
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 5.1e-217 758.8 843 47.9
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 4.8e-215 752.3 858 48.1
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 2.0e-213 746.9 843 47.4
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 7.9e-210 734.9 844 45.6
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 1.4e-209 734.2 846 47.9
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.5e-208 730.7 789 49.6
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 3.7e-207 726.1 844 49.4
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 6.3e-207 725.3 845 45.6
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 6.3e-207 725.3 844 45.3
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 1.5e-205 720.7 841 45.9
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 1.9e-203 713.8 846 46.9
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 2.5e-203 713.4 841 47.2
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 1.4e-201 707.6 851 46.5
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.1e-198 698.0 843 47.0
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 5.3e-198 695.7 843 47.1
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 9.1e-198 694.9 685 53.4
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 4.5e-197 692.6 845 46.3
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.4e-195 687.6 842 45.1
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 7.2e-195 685.3 841 44.4
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.8e-193 680.6 881 44.4
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 5.7e-192 675.6 843 45.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 9.7e-192 674.9 841 43.9
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 9.7e-192 674.9 844 44.7
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 8.2e-191 671.8 873 43.5
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 8.2e-191 671.8 843 44.4
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 4.5e-189 666.0 843 44.6
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 7.7e-189 665.2 844 44.0
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 1.0e-188 664.8 845 43.9
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 3.8e-188 662.9 844 44.7
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 7.2e-187 658.7 843 43.3
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 4.7e-186 656.0 840 42.7
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 3.3e-184 649.8 866 42.4
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 4.4e-184 649.4 842 43.5
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 8.3e-183 645.2 840 42.6
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 1.6e-181 641.0 842 43.0
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.6e-181 641.0 838 42.5
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.6e-181 641.0 838 42.5
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 5.9e-181 639.0 844 43.1
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.1e-179 634.8 854 42.5
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 5.5e-179 632.5 767 45.4
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 7.2e-179 632.1 865 41.4
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.8e-175 620.2 846 40.8
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 7.0e-174 615.5 764 45.4
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.3e-172 611.3 845 41.2
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.8e-172 609.8 841 41.1
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 3.3e-171 606.7 756 44.3
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 2.3e-169 600.5 841 40.8
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 1.3e-167 594.7 842 41.2
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.8e-167 593.6 844 41.4
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.4e-166 591.3 854 41.0
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.2e-165 588.2 868 40.6
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 1.5e-163 581.3 641 48.8
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.9e-159 567.0 842 39.4
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.9e-155 554.3 845 38.9
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.5e-152 544.7 842 38.5
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 1.2e-149 535.0 844 38.5
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.1e-146 524.2 845 36.7
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 6.4e-143 512.7 547 49.9
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 1.2e-141 508.4 840 36.4
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 7.1e-126 456.1 619 43.0
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 3.9e-124 450.3 645 42.5
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.9e-118 431.4 615 41.6
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 1.2e-117 428.7 493 51.1
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 1.3e-114 418.7 876 33.6
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 4.5e-104 383.6 317 68.1
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 8.8e-76 289.7 647 32.6
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 1.7e-74 285.4 653 31.2
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 1.8e-68 265.4 279 46.2
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 6.8e-68 263.5 386 41.2
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.2e-66 258.5 332 43.7
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 6.3e-66 256.9 189 69.8
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.1e-61 241.9 316 41.8
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.2e-59 236.1 278 46.4
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 5.7e-51 207.2 233 55.8
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.4e-41 176.0 197 45.2
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 3.1e-36 158.3 866 22.6
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 3.9e-31 141.4 137 49.6
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 2.6e-27 128.6 90 71.1
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.9e-22 112.5 123 52.0
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 5.1e-15 87.8 133 30.8
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.6e-13 82.8 80 48.8
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 9.9e-11 73.6 69 56.5
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 1.7e-10 72.8 101 37.6
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 4.9e-10 71.2 90 41.1
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 9.3e-09 67.0 66 50.0
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.3e-06 58.5 52 57.7


User provided reference genes

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