Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 2.1e-123 445.7 220 100.0
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.3e-93 346.7 200 82.5
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 9.3e-87 323.9 228 71.5
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 3.3e-84 315.5 228 69.7
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.4e-74 282.7 234 61.5
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 6.9e-74 281.2 227 62.1
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 2.3e-69 266.2 226 59.3
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 6.3e-67 258.1 226 59.7
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 6.1e-62 241.5 231 55.0
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 5.1e-61 238.4 220 54.1
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 2.0e-60 236.5 220 53.2
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 3.3e-60 235.7 197 55.3
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 4.4e-60 235.3 230 52.2
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.0e-56 224.2 220 50.0
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.7e-56 223.4 198 54.0
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 5.0e-56 221.9 208 51.9
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.9e-54 214.5 197 51.3
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.9e-54 214.5 197 51.3
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 5.2e-53 211.8 198 55.6
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 8.8e-53 211.1 197 52.3
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 3.3e-52 209.1 198 51.0
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 5.7e-52 208.4 198 50.0
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 9.7e-52 207.6 200 50.5
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 9.7e-52 207.6 245 43.3
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 6.3e-51 204.9 197 48.7
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.1e-50 204.1 209 50.7
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.8e-50 203.4 199 49.2
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 2.4e-50 203.0 198 51.0
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 2.4e-50 203.0 197 48.7
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.4e-50 203.0 197 49.7
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 2.0e-49 199.9 201 46.8
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 2.6e-49 199.5 195 49.7
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 3.5e-49 199.1 184 51.1
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 5.9e-49 198.4 199 46.2
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.7e-48 196.8 204 47.5
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.2e-48 196.4 202 50.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.2e-48 196.4 202 50.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 6.5e-48 194.9 234 45.3
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 8.5e-48 194.5 168 50.6
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.9e-47 193.4 202 49.0
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 9.4e-47 191.0 202 47.5
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 3.6e-46 189.1 205 44.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 4.7e-46 188.7 200 46.5
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 8.0e-46 188.0 198 47.0
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 4.0e-45 185.7 196 46.4
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.8e-45 184.5 211 46.0
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.2e-44 184.1 201 41.8
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.5e-44 183.7 211 45.5
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.6e-44 183.0 191 46.6
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.6e-44 183.0 211 45.5
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 4.4e-44 182.2 202 45.0
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 4.4e-44 182.2 211 45.5
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.2e-43 179.9 191 46.6
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.8e-43 179.5 235 42.6
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 4.8e-43 178.7 203 45.3
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 4.8e-43 178.7 187 48.1
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.8e-43 178.7 197 42.6
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 6.3e-43 178.3 206 44.7
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 6.3e-43 178.3 193 44.6
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 1.8e-42 176.8 233 41.2
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.2e-41 174.1 145 61.4
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 3.5e-41 172.6 163 50.3
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 5.9e-41 171.8 238 42.9
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 7.7e-41 171.4 236 37.3
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.0e-40 171.0 241 41.5
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.3e-40 170.6 208 43.3
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.2e-40 169.9 212 43.4
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.2e-40 169.9 170 45.3
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 3.8e-40 169.1 197 43.1
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 3.8e-40 169.1 197 42.6
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 6.5e-40 168.3 241 42.3
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.5e-40 168.3 231 43.3
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.1e-39 167.5 197 42.1
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 3.2e-39 166.0 240 41.2
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.6e-38 163.7 241 40.7
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 2.1e-38 163.3 199 43.2
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 4.7e-38 162.2 151 50.3
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.4e-37 160.6 198 39.4
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 1.8e-37 160.2 239 36.8
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 2.3e-37 159.8 231 40.7
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-36 157.5 286 32.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.2e-36 157.5 243 39.9
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 2.0e-36 156.8 219 37.0
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.4e-36 156.0 173 43.9
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 4.4e-36 155.6 187 40.6
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.7e-36 155.2 204 39.7
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 1.7e-35 153.7 195 40.5
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 8.3e-35 151.4 184 37.0
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 1.3e-32 144.1 199 39.7
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.7e-32 143.7 215 36.3
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.8e-29 133.7 197 36.5
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 9.2e-26 121.3 119 48.7
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.2e-22 110.9 125 40.8
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 2.8e-22 109.8 126 44.4
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.4e-21 107.5 198 32.8
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.0e-21 105.9 82 51.2
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 5.2e-21 105.5 119 43.7
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 8.3e-19 98.2 91 45.1
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 2.4e-18 96.7 84 50.0
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.2e-18 96.3 90 46.7
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.1e-13 79.7 201 25.4
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.3e-11 74.3 81 43.2
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.3e-11 74.3 74 45.9
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 2.9e-11 73.2 195 27.7
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.4e-10 70.9 203 23.2
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.9e-07 60.5 64 45.3
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 3.6e-06 56.2 193 21.8


User provided reference genes

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