Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 4.0e-60 234.6 119 100.0
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 3.5e-40 168.3 118 80.5
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 2.1e-37 159.1 114 75.4
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 4.0e-36 154.8 108 79.6
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 3.2e-25 118.6 93 67.7
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 2.1e-24 115.9 114 58.8
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 3.5e-24 115.2 114 58.8
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 1.8e-23 112.8 105 54.3
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 6.7e-23 110.9 103 56.3
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 2.5e-22 109.0 94 66.0
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 4.3e-22 108.2 101 55.4
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 5.7e-22 107.8 78 67.9
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 1.6e-21 106.3 87 67.8
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.6e-21 106.3 96 58.3
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.6e-21 106.3 83 66.3
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.2e-21 105.9 82 63.4
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 2.2e-21 105.9 106 53.8
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 2.8e-21 105.5 91 60.4
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 3.7e-21 105.1 85 61.2
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 3.7e-21 105.1 99 61.6
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.3e-21 104.4 92 56.5
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 1.4e-20 103.2 83 62.7
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 1.4e-20 103.2 84 63.1
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 2.4e-20 102.4 101 53.5
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 5.3e-20 101.3 73 67.1
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.2e-19 100.1 90 56.7
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 1.2e-19 100.1 117 51.3
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 1.5e-19 99.8 90 56.7
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.5e-19 99.8 98 55.1
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 1.5e-19 99.8 92 57.6
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.0e-19 99.4 101 47.5
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 2.6e-19 99.0 89 60.7
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 2.6e-19 99.0 106 49.1
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.4e-19 98.6 73 64.4
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 3.4e-19 98.6 114 50.0
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 3.4e-19 98.6 92 56.5
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 4.5e-19 98.2 93 54.8
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 4.5e-19 98.2 90 58.9
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 7.7e-19 97.4 105 51.4
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 1.0e-18 97.1 108 50.9
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 1.0e-18 97.1 106 50.9
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 1.3e-18 96.7 91 57.1
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 1.7e-18 96.3 85 56.5
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.7e-18 96.3 112 48.2
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 2.9e-18 95.5 83 57.8
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 2.9e-18 95.5 92 55.4
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 3.8e-18 95.1 77 63.6
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 3.8e-18 95.1 86 61.6
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 5.0e-18 94.7 80 58.8
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.0e-18 94.7 80 58.8
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.0e-18 94.7 80 58.8
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 5.0e-18 94.7 94 54.3
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 5.0e-18 94.7 82 58.5
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 6.5e-18 94.4 112 48.2
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 6.5e-18 94.4 88 55.7
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 6.5e-18 94.4 86 58.1
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 1.1e-17 93.6 92 57.6
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.4e-17 93.2 76 56.6
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 3.2e-17 92.0 98 50.0
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 4.2e-17 91.7 80 57.5
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.5e-17 91.3 80 57.5
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 7.2e-17 90.9 90 55.6
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 9.4e-17 90.5 92 54.3
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 9.4e-17 90.5 106 46.2
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.2e-16 90.1 79 57.0
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.6e-16 89.7 88 53.4
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 2.1e-16 89.4 92 52.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 3.6e-16 88.6 83 53.0
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 4.6e-16 88.2 84 59.5
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 1.4e-15 86.7 81 58.0
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.4e-15 86.7 108 48.1
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.4e-15 86.7 108 48.1
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.8e-15 86.3 93 52.7
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 3.9e-15 85.1 64 65.6
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 3.9e-15 85.1 111 45.9
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 1.1e-14 83.6 86 50.0
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.1e-14 83.6 86 50.0
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 1.5e-14 83.2 98 44.9
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 1.5e-14 83.2 88 53.4
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.5e-14 83.2 89 56.2
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 1.5e-14 83.2 132 38.6
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 2.5e-14 82.4 86 50.0
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.5e-14 82.4 89 56.2
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 4.3e-14 81.6 86 52.3
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 1.3e-13 80.1 79 51.9
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.2e-13 79.3 91 46.2
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 2.8e-13 79.0 92 52.2
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.8e-13 79.0 95 51.6
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 1.1e-12 77.0 103 44.7
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 1.4e-12 76.6 95 50.5
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.4e-12 75.9 86 48.8
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 3.1e-12 75.5 71 53.5
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 9.1e-12 73.9 83 51.8
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 1.5e-11 73.2 80 51.2
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 2.0e-11 72.8 111 43.2
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 2.0e-11 72.8 111 43.2
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 4.5e-11 71.6 94 46.8
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 2.5e-09 65.9 108 40.7
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 9.4e-09 63.9 99 42.4
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 2.1e-08 62.8 108 39.8
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 2.1e-08 62.8 108 39.8
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 6.1e-08 61.2 75 48.0
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 7.9e-08 60.8 78 43.6
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 6.7e-07 57.8 81 43.2
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.1e-06 57.0 64 45.3
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.1e-06 57.0 90 40.0
Pp3c19_3200 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.0e-06 56.2 83 43.4
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 2.6e-06 55.8 72 47.2


User provided reference genes

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