Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 8.3e-67 256.9 131 100.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 7.5e-60 233.8 131 90.8
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 2.1e-57 225.7 131 87.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.7e-56 222.6 131 87.8
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 3.6e-54 214.9 128 86.7
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 6.2e-54 214.2 128 85.2
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.9e-50 202.6 127 81.1
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.1e-50 201.4 123 83.7
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.1e-49 199.1 123 83.7
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.7e-49 198.7 123 82.9
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 3.9e-48 194.9 127 79.5
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 8.6e-48 193.7 123 80.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.1e-46 189.1 123 78.0
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 3.2e-42 175.3 110 80.9
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 4.2e-42 174.9 110 79.1
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 7.1e-42 174.1 115 78.3
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 9.3e-42 173.7 118 75.4
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 9.3e-42 173.7 107 81.3
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 9.3e-42 173.7 107 81.3
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.6e-41 172.9 117 76.9
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.6e-41 172.9 117 76.9
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.6e-41 172.9 116 76.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.7e-41 172.2 117 76.1
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.6e-41 171.4 106 81.1
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 7.8e-41 170.6 107 77.6
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 7.8e-41 170.6 117 76.1
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.7e-40 169.5 117 73.5
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.7e-40 169.5 107 77.6
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 3.0e-40 168.7 108 76.9
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 3.0e-40 168.7 108 77.8
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 3.0e-40 168.7 116 74.1
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 3.9e-40 168.3 107 76.6
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 6.6e-40 167.5 108 76.9
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.7e-40 167.2 114 75.4
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 8.7e-40 167.2 114 75.4
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.1e-39 166.8 107 77.6
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-39 166.8 117 71.8
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.5e-39 166.4 108 76.9
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.5e-39 165.6 127 68.5
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.5e-39 165.6 113 75.2
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.6e-39 164.5 115 73.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.6e-39 164.5 115 73.0
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 7.3e-39 164.1 121 70.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 9.6e-39 163.7 108 77.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 9.6e-39 163.7 117 70.1
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 2.8e-38 162.2 118 71.2
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 3.6e-38 161.8 116 70.7
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 4.8e-38 161.4 110 71.8
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.2e-38 161.0 107 75.7
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 6.2e-38 161.0 119 68.9
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 8.1e-38 160.6 108 71.3
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.1e-38 160.6 111 73.9
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.1e-38 160.6 111 73.9
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.1e-37 160.2 111 70.3
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.4e-37 159.8 111 69.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.8e-37 159.5 120 67.5
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.1e-37 158.7 114 71.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.0e-37 158.3 114 70.2
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 4.0e-37 158.3 114 70.2
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.9e-37 157.5 122 68.0
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 6.9e-37 157.5 111 73.0
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.3e-35 153.3 106 72.6
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.9e-35 152.1 116 66.4
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.9e-35 152.1 99 77.8
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 3.8e-35 151.8 117 65.0
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 6.4e-35 151.0 114 67.5
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.4e-34 149.8 104 73.1
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 4.2e-34 148.3 108 68.5
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 4.2e-34 148.3 104 73.1
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 4.2e-34 148.3 117 64.1
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 5.4e-34 147.9 119 63.9
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 2.1e-33 146.0 117 61.5
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.7e-33 145.6 101 75.2
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 7.9e-33 144.1 109 66.1
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-32 143.7 99 75.8
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.0e-32 143.7 109 65.1
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 3.0e-32 142.1 108 64.8
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.0e-32 142.1 108 63.9
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 3.9e-32 141.7 108 63.9
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.1e-31 140.2 94 70.2
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.5e-31 139.8 111 64.9
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.9e-31 139.4 108 66.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.5e-31 139.0 111 63.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 3.1e-29 132.1 113 62.8
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 5.3e-29 131.3 115 60.9
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 2.0e-28 129.4 108 62.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 8.4e-27 124.0 108 60.2
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.1e-26 123.6 107 58.9
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.1e-26 123.6 108 60.2
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.2e-26 121.7 72 81.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.0e-24 117.1 92 60.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.0e-24 117.1 108 56.5
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-24 116.7 108 59.3
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.3e-24 116.7 108 59.3
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.8e-24 116.3 107 59.8
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 5.1e-24 114.8 72 77.8
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.1e-24 114.8 72 77.8
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.1e-24 114.8 72 77.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 6.7e-24 114.4 72 79.2
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.1e-23 113.6 88 64.8
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.5e-23 113.2 113 53.1
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.5e-23 113.2 116 52.6
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.5e-23 113.2 116 52.6
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 1.5e-23 113.2 108 55.6
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 9.6e-23 110.5 85 62.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.8e-22 109.0 66 80.3
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 4.0e-21 105.1 111 45.9
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.6e-20 102.4 72 66.7
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.6e-20 102.4 59 83.1
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-20 102.4 59 83.1
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.4e-20 102.1 115 47.0
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 4.5e-20 101.7 77 63.6
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 5.8e-20 101.3 72 66.7
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 5.8e-20 101.3 107 49.5
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 5.8e-20 101.3 74 64.9
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 7.6e-20 100.9 107 49.5
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 7.6e-20 100.9 90 60.0
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.3e-19 100.1 75 64.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.3e-19 100.1 75 64.0
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.7e-19 99.8 77 62.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 2.9e-19 99.0 77 62.3
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 8.4e-19 97.4 88 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 7.1e-18 94.4 111 41.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.5e-15 85.9 103 41.7
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.5e-15 85.9 97 42.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.6e-14 83.2 73 50.7
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-13 80.5 46 82.6
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.4e-10 70.1 86 48.8
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-07 60.5 50 60.0


User provided reference genes

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