Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 4.0e-118 428.3 252 100.0
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.2e-101 373.6 210 88.1
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.3e-97 360.1 208 85.1
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 9.3e-83 310.8 208 74.5
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 1.6e-82 310.1 208 74.0
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 5.3e-78 295.0 204 73.0
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 2.0e-77 293.1 201 74.6
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 1.0e-76 290.8 192 76.0
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.9e-75 286.6 207 72.5
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 2.5e-75 286.2 203 70.9
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.0e-73 280.8 170 80.6
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 2.2e-71 273.1 198 70.7
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 8.2e-71 271.2 188 71.3
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.1e-70 270.8 187 73.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.1e-70 270.8 180 74.4
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.8e-70 270.0 196 70.4
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 2.4e-70 269.6 183 73.8
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 5.3e-70 268.5 193 71.5
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 2.0e-69 266.5 171 75.4
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.7e-68 263.5 183 72.1
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 1.7e-68 263.5 195 69.7
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 2.9e-68 262.7 190 71.1
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.8e-68 262.3 159 80.5
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 6.5e-68 261.5 200 66.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 8.5e-68 261.2 171 76.6
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 8.5e-68 261.2 171 74.3
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.4e-67 260.4 192 66.7
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 3.2e-67 259.2 198 66.7
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 4.2e-67 258.8 172 73.8
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.2e-66 257.3 195 69.2
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.2e-66 257.3 194 67.5
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.2e-66 257.3 200 65.5
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.6e-66 256.9 173 72.3
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.1e-66 256.5 193 67.9
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 4.7e-66 255.4 149 81.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.7e-66 255.4 171 73.1
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 3.9e-65 252.3 147 81.6
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.1e-65 251.9 189 67.7
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 8.8e-65 251.1 204 65.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.5e-64 250.4 208 63.0
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.0e-64 250.0 207 63.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 2.6e-64 249.6 214 63.6
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 2.6e-64 249.6 171 71.3
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 2.6e-64 249.6 219 62.1
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 5.7e-64 248.4 171 71.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.7e-64 248.4 171 71.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.7e-64 248.4 171 71.3
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 7.4e-64 248.1 216 61.6
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 7.4e-64 248.1 212 60.8
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 9.7e-64 247.7 189 65.6
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 1.3e-63 247.3 171 70.8
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.3e-63 247.3 194 66.5
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.7e-63 246.9 172 71.5
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 4.8e-63 245.4 186 69.4
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 1.4e-62 243.8 201 64.2
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.8e-62 243.4 191 64.9
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.1e-62 242.7 202 62.9
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 3.1e-62 242.7 169 66.9
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 5.3e-62 241.9 222 61.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 7.0e-62 241.5 215 60.9
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.2e-61 240.7 141 77.3
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 2.6e-61 239.6 188 61.7
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.6e-61 239.6 180 66.7
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 5.9e-61 238.4 146 77.4
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.0e-60 237.7 172 70.3
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.3e-60 237.3 201 61.7
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.3e-60 237.3 166 71.7
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 2.9e-60 236.1 137 81.8
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 3.8e-60 235.7 202 58.4
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.4e-59 233.8 195 66.7
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 3.2e-59 232.6 163 65.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 4.2e-59 232.3 203 59.6
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 5.5e-59 231.9 166 69.9
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 7.2e-59 231.5 178 65.2
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 2.1e-58 229.9 187 60.4
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 4.7e-58 228.8 164 67.1
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 3.0e-57 226.1 183 63.4
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 8.8e-57 224.6 221 55.7
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.1e-56 224.2 217 59.0
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.5e-56 223.8 163 66.9
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.5e-56 223.8 163 66.9
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.4e-56 222.2 163 66.9
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 5.7e-56 221.9 137 78.1
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 9.7e-56 221.1 168 68.5
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 4.1e-54 215.7 147 70.1
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 9.1e-54 214.5 176 61.9
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 4.5e-53 212.2 183 61.7
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 4.5e-53 212.2 133 70.7
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.1e-51 207.6 172 61.0
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 5.5e-51 205.3 190 56.3
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 2.4e-46 189.9 150 66.0
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.7e-45 186.4 123 71.5
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 9.4e-43 177.9 176 55.1
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.2e-42 177.6 140 64.3
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 6.8e-41 171.8 178 51.1
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 5.7e-40 168.7 189 52.4
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 4.8e-39 165.6 198 49.5
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.8e-38 163.7 142 59.2
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 4.4e-32 142.5 86 75.6
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.3e-31 141.0 147 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 3.2e-30 136.3 157 45.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.7e-28 130.6 65 86.2
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 6.8e-25 118.6 83 67.5
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 8.6e-20 101.7 89 61.8
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.2e-18 97.8 122 47.5
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.8e-17 94.0 56 73.2
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 6.8e-17 92.0 67 62.7
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.4e-14 84.3 101 48.5
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.6e-13 80.9 62 61.3
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.5e-13 79.7 75 57.3
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 4.9e-07 59.3 37 64.9
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 5.4e-06 55.8 116 29.3


User provided reference genes

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